==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER METAL BINDING PROTEIN 21-JUN-05 2A20 . COMPND 2 MOLECULE: REGULATING SYNAPTIC MEMBRANE EXOCYTOSIS PROTEIN . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR I.DULUBOVA,X.LOU,J.LU,I.HURYEVA,A.ALAM,R.SCHNEGGENBURGER, . 60 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5264.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 3.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 15.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 13.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 8.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 83 A Q 0 0 205 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 122.8 -10.4 6.9 -10.3 2 84 A E - 0 0 154 4,-0.0 2,-1.2 0, 0.0 4,-0.3 -0.962 360.0-136.4-139.2 119.4 -14.2 7.1 -9.8 3 85 A Q + 0 0 185 -2,-0.4 0, 0.0 1,-0.2 0, 0.0 -0.609 46.8 142.7 -76.6 98.4 -16.0 8.2 -6.6 4 86 A K S S- 0 0 170 -2,-1.2 -1,-0.2 2,-0.1 3,-0.1 0.009 79.6 -91.8-124.7 25.3 -18.8 5.7 -6.3 5 87 A G S S+ 0 0 81 1,-0.2 2,-0.5 0, 0.0 -2,-0.1 0.722 72.9 160.2 71.7 20.8 -18.8 5.2 -2.5 6 88 A D - 0 0 105 -4,-0.3 -1,-0.2 1,-0.1 -2,-0.1 -0.651 34.7-132.1 -80.6 125.0 -16.4 2.3 -2.8 7 89 A A - 0 0 59 -2,-0.5 2,-0.4 -3,-0.1 12,-0.1 -0.195 29.1 -91.5 -70.3 166.1 -14.5 1.5 0.4 8 90 A P - 0 0 32 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 -0.664 48.7-178.7 -83.7 130.7 -10.7 1.0 0.5 9 91 A T - 0 0 54 -2,-0.4 2,-0.2 8,-0.3 8,-0.2 -0.963 30.0-108.6-134.9 149.7 -9.5 -2.6 0.2 10 92 A C - 0 0 2 6,-0.8 4,-0.5 -2,-0.3 23,-0.3 -0.514 19.0-142.5 -73.1 136.0 -6.2 -4.5 0.2 11 93 A G S S+ 0 0 54 21,-3.6 22,-0.1 -2,-0.2 -1,-0.1 0.269 96.0 41.1 -83.6 13.3 -5.1 -5.8 -3.2 12 94 A I S S+ 0 0 91 20,-0.1 -1,-0.1 19,-0.0 21,-0.1 0.663 131.5 12.5-119.4 -69.3 -3.8 -9.0 -1.6 13 95 A C S S- 0 0 60 3,-0.1 -2,-0.1 1,-0.0 20,-0.1 0.607 81.8-147.9 -89.0 -14.1 -6.0 -10.3 1.2 14 96 A H S S+ 0 0 137 -4,-0.5 -3,-0.1 2,-0.1 3,-0.1 0.740 77.9 89.3 53.0 23.5 -8.9 -8.1 0.1 15 97 A K + 0 0 140 1,-0.1 2,-0.5 -6,-0.0 -1,-0.1 0.773 60.5 75.5-111.2 -58.2 -9.9 -8.1 3.8 16 98 A T S S- 0 0 48 -7,-0.1 -6,-0.8 1,-0.1 2,-0.5 -0.455 70.6-154.2 -63.2 112.2 -8.1 -5.2 5.5 17 99 A K - 0 0 141 -2,-0.5 -8,-0.3 -8,-0.2 -1,-0.1 -0.807 16.0-122.7 -94.2 124.3 -9.9 -2.0 4.4 18 100 A F - 0 0 18 -2,-0.5 3,-0.2 1,-0.1 5,-0.1 0.023 32.8 -96.8 -56.2 169.7 -7.8 1.2 4.5 19 101 A A - 0 0 82 1,-0.2 2,-1.1 3,-0.1 -1,-0.1 0.008 69.8 -42.5 -78.2-171.4 -8.8 4.2 6.5 20 102 A D S S+ 0 0 172 1,-0.1 2,-0.4 2,-0.1 -1,-0.2 -0.369 128.1 1.8 -58.2 94.8 -10.7 7.3 5.4 21 103 A G S S- 0 0 60 -2,-1.1 2,-0.3 -3,-0.2 -1,-0.1 -0.890 121.1 -15.4 134.5-106.0 -9.0 7.9 2.1 22 104 A C - 0 0 93 -2,-0.4 -3,-0.1 1,-0.1 3,-0.1 -1.000 50.6-150.9-142.6 140.0 -6.2 5.5 0.8 23 105 A G - 0 0 20 -2,-0.3 2,-0.6 1,-0.2 11,-0.1 0.461 57.5 -35.9 -80.7-136.2 -4.1 2.9 2.5 24 106 A H E -A 33 0A 46 9,-1.5 9,-4.1 25,-0.0 2,-0.5 -0.826 57.6-164.8 -96.7 121.4 -0.6 1.8 1.5 25 107 A N E -A 32 0A 55 -2,-0.6 25,-0.8 7,-0.3 7,-0.2 -0.908 29.0-107.6-110.0 129.9 0.1 1.8 -2.2 26 108 A C B > -b 50 0B 0 5,-3.1 4,-1.2 -2,-0.5 25,-0.3 -0.302 19.1-141.6 -54.7 122.3 3.2 0.1 -3.7 27 109 A S T 4 S+ 0 0 40 23,-3.0 -1,-0.2 2,-0.1 24,-0.1 0.691 99.9 29.2 -59.4 -17.3 5.7 2.7 -4.7 28 110 A Y T 4 S+ 0 0 131 22,-0.3 -1,-0.1 3,-0.1 23,-0.1 0.792 130.3 28.6-104.9 -77.7 6.4 0.4 -7.7 29 111 A C T 4 S- 0 0 72 1,-0.1 -2,-0.1 2,-0.1 3,-0.1 0.748 91.3-139.6 -58.5 -24.7 3.3 -1.6 -8.8 30 112 A Q < + 0 0 124 -4,-1.2 -1,-0.1 1,-0.3 -3,-0.1 0.491 49.5 151.4 75.0 2.8 1.1 1.1 -7.4 31 113 A T - 0 0 68 -6,-0.1 -5,-3.1 1,-0.1 2,-0.7 -0.359 51.0-115.4 -67.7 145.2 -1.1 -1.6 -6.0 32 114 A K E +A 25 0A 89 -7,-0.2 -21,-3.6 -3,-0.1 2,-0.3 -0.739 46.8 163.7 -86.6 116.4 -3.1 -0.8 -2.9 33 115 A F E -A 24 0A 0 -9,-4.1 -9,-1.5 -2,-0.7 2,-0.1 -0.874 33.4-111.0-130.5 163.3 -2.1 -3.0 0.0 34 116 A C > - 0 0 3 -2,-0.3 3,-1.4 -11,-0.1 -17,-0.0 -0.325 42.3 -94.2 -86.9 171.8 -2.5 -3.0 3.8 35 117 A A T 3 S+ 0 0 59 1,-0.3 3,-0.4 2,-0.2 5,-0.1 0.670 128.1 52.4 -60.1 -15.9 0.3 -2.5 6.4 36 118 A R T 3 S+ 0 0 198 1,-0.2 -1,-0.3 3,-0.1 17,-0.0 0.644 105.7 52.2 -94.4 -17.9 0.6 -6.3 6.5 37 119 A C S < S+ 0 0 16 -3,-1.4 16,-0.9 -13,-0.0 17,-0.3 -0.024 119.8 15.9-106.8 29.2 1.1 -6.7 2.8 38 120 A G E S-C 52 0B 5 -3,-0.4 2,-0.3 14,-0.3 14,-0.3 -0.959 71.3-111.4-173.2-172.1 3.9 -4.1 2.5 39 121 A G E -C 51 0B 3 12,-1.6 12,-1.9 -2,-0.3 2,-0.6 -0.969 26.7-106.9-142.9 158.0 6.5 -2.0 4.2 40 122 A R E +C 50 0B 177 -2,-0.3 2,-0.3 10,-0.2 10,-0.2 -0.748 37.4 168.8 -88.5 121.8 7.3 1.6 5.0 41 123 A V E -C 49 0B 59 8,-3.4 8,-1.0 -2,-0.6 2,-0.4 -0.794 8.9-174.6-136.6 92.7 10.1 3.1 3.0 42 124 A S E -C 48 0B 55 -2,-0.3 2,-1.4 6,-0.2 6,-0.2 -0.739 20.7-142.4 -91.4 131.8 10.5 6.8 3.2 43 125 A L S S- 0 0 99 4,-1.4 4,-0.1 -2,-0.4 -1,-0.1 -0.643 71.9 -45.9 -92.7 79.1 13.1 8.5 1.0 44 126 A R S > S- 0 0 213 -2,-1.4 3,-1.2 2,-0.1 2,-0.3 0.564 95.1 -54.8 67.2 135.2 14.4 11.2 3.4 45 127 A S T 3 S+ 0 0 133 1,-0.2 -1,-0.1 -3,-0.1 3,-0.1 -0.152 122.0 70.3 -44.1 97.5 12.0 13.2 5.5 46 128 A N T 3 S+ 0 0 146 -2,-0.3 2,-0.3 0, 0.0 -1,-0.2 0.132 100.0 22.7 179.8 -36.5 9.8 14.6 2.7 47 129 A K < - 0 0 125 -3,-1.2 -4,-1.4 -4,-0.1 2,-0.6 -0.937 61.4-144.4-154.9 127.6 7.8 11.7 1.3 48 130 A V E - C 0 42B 92 -2,-0.3 2,-0.4 -6,-0.2 -6,-0.2 -0.829 22.1-172.5 -96.3 118.5 6.7 8.4 2.7 49 131 A M E - C 0 41B 45 -8,-1.0 -8,-3.4 -2,-0.6 2,-0.4 -0.880 10.8-149.5-113.4 143.3 6.6 5.5 0.2 50 132 A W E -bC 26 40B 36 -25,-0.8 -23,-3.0 -2,-0.4 2,-0.5 -0.933 7.5-164.8-114.6 131.5 5.2 2.0 0.7 51 133 A V E - C 0 39B 8 -12,-1.9 -12,-1.6 -2,-0.4 -25,-0.1 -0.962 23.3-119.8-118.7 125.2 6.6 -1.1 -1.1 52 134 A C E >> - C 0 38B 7 -2,-0.5 4,-3.6 -14,-0.3 3,-1.4 -0.136 30.5-106.2 -58.4 155.0 4.7 -4.4 -1.2 53 135 A N H 3> S+ 0 0 67 -16,-0.9 4,-0.7 1,-0.3 5,-0.2 0.683 122.6 58.5 -55.9 -18.6 6.3 -7.5 0.3 54 136 A L H 3> S+ 0 0 111 -17,-0.3 4,-1.2 3,-0.2 -1,-0.3 0.802 115.6 32.5 -82.0 -31.2 6.8 -8.6 -3.3 55 137 A C H <> S+ 0 0 13 -3,-1.4 4,-2.8 2,-0.2 -2,-0.2 0.865 118.1 52.0 -89.7 -45.1 8.9 -5.5 -4.1 56 138 A R H < S+ 0 0 140 -4,-3.6 -3,-0.2 2,-0.2 -2,-0.2 0.798 121.0 36.5 -62.0 -29.2 10.5 -5.0 -0.7 57 139 A K H >< S+ 0 0 170 -4,-0.7 3,-1.5 -5,-0.4 -2,-0.2 0.908 120.1 43.5 -88.8 -51.8 11.6 -8.6 -0.8 58 140 A Q H 3< S+ 0 0 149 -4,-1.2 -2,-0.2 1,-0.3 -3,-0.2 0.834 116.7 49.0 -64.0 -33.2 12.4 -9.1 -4.4 59 141 A Q T 3< 0 0 120 -4,-2.8 -1,-0.3 -5,-0.1 -2,-0.1 0.298 360.0 360.0 -89.3 9.7 14.2 -5.8 -4.5 60 142 A E < 0 0 227 -3,-1.5 -3,-0.2 -5,-0.1 -2,-0.1 0.935 360.0 360.0 51.0 360.0 16.2 -6.7 -1.4