==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSFERASE 21-JUL-05 2AE9 . COMPND 2 MOLECULE: DNA POLYMERASE III, THETA SUBUNIT; . SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; . AUTHOR G.A.MUELLER,T.W.KIRBY,E.F.DEROSE,D.LI,R.M.SCHAAPER, . 76 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6443.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 71.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 51.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 212 0, 0.0 3,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 106.0 32.4 8.8 8.7 2 2 A L - 0 0 177 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.584 360.0 -11.2-127.0 -62.6 28.8 8.2 9.8 3 3 A K - 0 0 133 0, 0.0 2,-2.1 0, 0.0 0, 0.0 -0.763 52.0-160.9-153.0 95.2 26.7 6.5 7.1 4 4 A N - 0 0 129 -2,-0.2 2,-2.3 1,-0.1 3,-0.2 -0.530 66.3 -79.9 -81.2 75.0 28.1 6.2 3.5 5 5 A L + 0 0 139 -2,-2.1 -1,-0.1 1,-0.2 0, 0.0 -0.448 65.4 178.5 63.9 -77.4 24.7 5.6 1.9 6 6 A A + 0 0 41 -2,-2.3 -1,-0.2 1,-0.1 -2,-0.0 0.951 31.8 128.0 43.7 69.6 24.7 1.9 2.9 7 7 A K + 0 0 74 -3,-0.2 -1,-0.1 2,-0.0 3,-0.1 -0.095 23.2 122.3-141.5 34.4 21.3 1.1 1.5 8 8 A L S S+ 0 0 138 1,-0.2 3,-0.3 2,-0.1 -3,-0.0 0.996 91.8 7.6 -63.6 -69.3 22.1 -1.9 -0.7 9 9 A D S > S+ 0 0 134 1,-0.2 3,-0.6 2,-0.1 -1,-0.2 -0.063 99.8 103.0-110.1 31.6 19.8 -4.6 0.8 10 10 A Q T >> + 0 0 100 1,-0.2 4,-1.5 2,-0.1 3,-0.8 0.198 50.6 101.2 -91.7 15.6 17.9 -2.3 3.0 11 11 A T H 3> + 0 0 18 1,-0.3 4,-3.2 2,-0.3 -1,-0.2 0.621 66.4 68.9 -79.6 -13.3 15.2 -2.5 0.4 12 12 A E H <> S+ 0 0 118 -3,-0.6 4,-2.1 2,-0.2 -1,-0.3 0.819 103.9 45.4 -62.1 -29.5 13.4 -4.9 2.6 13 13 A M H <> S+ 0 0 88 -3,-0.8 4,-2.5 2,-0.2 -2,-0.3 0.869 109.1 54.5 -79.3 -40.9 13.0 -1.8 4.7 14 14 A D H X S+ 0 0 7 -4,-1.5 4,-2.9 2,-0.2 5,-0.3 0.953 109.7 48.4 -50.5 -54.0 12.1 0.0 1.5 15 15 A K H X S+ 0 0 59 -4,-3.2 4,-3.1 2,-0.2 -2,-0.2 0.938 111.5 47.1 -52.6 -55.9 9.3 -2.6 1.0 16 16 A V H X S+ 0 0 89 -4,-2.1 4,-2.8 1,-0.2 -1,-0.2 0.868 113.3 50.8 -61.9 -36.6 7.9 -2.4 4.5 17 17 A N H X S+ 0 0 96 -4,-2.5 4,-2.4 2,-0.2 -1,-0.2 0.970 115.8 39.3 -60.2 -56.1 7.9 1.3 4.3 18 18 A V H X S+ 0 0 0 -4,-2.9 4,-2.7 1,-0.2 -2,-0.2 0.829 116.3 53.9 -67.4 -29.1 6.1 1.5 1.0 19 19 A D H X S+ 0 0 48 -4,-3.1 4,-2.1 -5,-0.3 5,-0.2 0.957 109.3 46.2 -66.6 -51.8 3.9 -1.4 2.1 20 20 A L H X S+ 0 0 126 -4,-2.8 4,-2.4 -5,-0.2 -2,-0.2 0.920 116.5 45.8 -57.3 -47.4 2.8 0.3 5.3 21 21 A A H X S+ 0 0 32 -4,-2.4 4,-3.1 1,-0.2 5,-0.2 0.946 113.1 48.1 -61.1 -50.3 2.1 3.5 3.4 22 22 A A H X S+ 0 0 0 -4,-2.7 4,-2.0 1,-0.2 -1,-0.2 0.790 112.8 50.7 -64.0 -26.3 0.2 1.8 0.5 23 23 A A H X S+ 0 0 18 -4,-2.1 4,-2.1 2,-0.2 5,-0.3 0.938 113.3 43.8 -74.4 -45.7 -1.8 -0.1 3.1 24 24 A G H X S+ 0 0 40 -4,-2.4 4,-2.5 -5,-0.2 -2,-0.2 0.892 116.1 46.9 -67.5 -42.1 -2.7 3.0 5.0 25 25 A V H X S+ 0 0 9 -4,-3.1 4,-2.6 2,-0.2 5,-0.3 0.932 108.8 54.4 -66.3 -50.2 -3.4 5.0 1.9 26 26 A A H X S+ 0 0 3 -4,-2.0 4,-1.8 -5,-0.2 5,-0.3 0.939 118.3 34.9 -48.4 -53.7 -5.6 2.3 0.3 27 27 A F H X>S+ 0 0 64 -4,-2.1 4,-2.3 3,-0.2 5,-0.7 0.869 112.1 64.6 -72.5 -36.2 -7.8 2.1 3.3 28 28 A K H X>S+ 0 0 101 -4,-2.5 4,-1.8 -5,-0.3 5,-1.8 0.969 115.0 27.0 -45.8 -65.0 -7.4 5.9 3.9 29 29 A E H X5S+ 0 0 49 -4,-2.6 4,-0.9 3,-0.2 -2,-0.2 0.985 125.0 44.9 -66.1 -58.5 -9.2 6.8 0.7 30 30 A R H <5S+ 0 0 130 -4,-1.8 -1,-0.2 -5,-0.3 -3,-0.2 0.730 119.9 39.2 -65.4 -28.5 -11.5 3.9 0.1 31 31 A Y H <5S- 0 0 80 -4,-2.3 -1,-0.2 -5,-0.3 -3,-0.2 0.869 137.2 -29.8 -93.9 -38.5 -12.8 3.6 3.6 32 32 A N H <> + 0 0 98 1,-0.2 4,-2.1 -2,-0.1 3,-0.8 -0.700 32.9 178.3 -98.3 83.9 -3.8 11.6 -2.2 37 37 A A H 3> S+ 0 0 24 -2,-1.2 4,-2.6 1,-0.2 -1,-0.2 0.856 82.0 61.5 -46.0 -40.9 -2.2 8.3 -3.3 38 38 A E H 3> S+ 0 0 135 1,-0.2 4,-1.3 2,-0.2 -1,-0.2 0.906 108.1 41.9 -54.1 -43.2 -0.3 10.3 -5.9 39 39 A A H <> S+ 0 0 42 -3,-0.8 4,-1.3 2,-0.3 -1,-0.2 0.806 110.8 53.6 -82.1 -30.2 1.4 12.3 -3.2 40 40 A V H X S+ 0 0 20 -4,-2.1 4,-0.6 2,-0.2 -1,-0.2 0.877 108.2 52.7 -66.7 -34.9 2.1 9.3 -1.0 41 41 A E H >< S+ 0 0 38 -4,-2.6 3,-0.8 -5,-0.3 -2,-0.3 0.878 104.4 56.9 -60.4 -39.6 3.7 7.9 -4.1 42 42 A R H 3< S+ 0 0 162 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.2 0.856 109.0 45.3 -56.0 -36.0 5.6 11.2 -4.2 43 43 A E H 3< S+ 0 0 164 -4,-1.3 -1,-0.2 -3,-0.1 -2,-0.2 0.522 102.6 79.4 -90.7 -6.2 6.9 10.4 -0.7 44 44 A Q S << S- 0 0 19 -3,-0.8 -30,-0.0 -4,-0.6 5,-0.0 -0.809 91.0 -95.4-111.3 143.8 7.8 6.7 -1.3 45 45 A P > - 0 0 49 0, 0.0 3,-2.3 0, 0.0 -2,-0.1 -0.295 27.4-132.8 -55.3 132.5 10.9 5.3 -3.1 46 46 A E G > S+ 0 0 152 1,-0.3 3,-2.6 2,-0.2 4,-0.5 0.733 101.1 77.9 -61.7 -22.9 10.2 4.6 -6.7 47 47 A H G 3 S+ 0 0 141 1,-0.3 -1,-0.3 2,-0.1 4,-0.2 0.803 104.4 35.6 -57.6 -28.5 11.8 1.1 -6.2 48 48 A L G <> S+ 0 0 4 -3,-2.3 4,-3.6 1,-0.1 -1,-0.3 0.006 85.9 111.4-109.6 26.7 8.4 0.2 -4.6 49 49 A R H <> S+ 0 0 114 -3,-2.6 4,-2.4 2,-0.2 -2,-0.1 0.972 86.8 38.1 -63.8 -53.0 6.3 2.3 -7.0 50 50 A S H > S+ 0 0 71 -4,-0.5 4,-3.2 2,-0.2 -1,-0.2 0.870 117.6 53.2 -60.6 -37.7 4.8 -0.7 -8.6 51 51 A W H > S+ 0 0 54 2,-0.2 4,-2.7 1,-0.2 -2,-0.2 0.884 105.2 52.7 -65.7 -42.8 4.8 -2.3 -5.1 52 52 A F H X S+ 0 0 4 -4,-3.6 4,-2.4 2,-0.2 -2,-0.2 0.955 114.0 44.8 -52.0 -52.1 2.9 0.7 -3.8 53 53 A R H X S+ 0 0 175 -4,-2.4 4,-2.6 1,-0.2 -2,-0.2 0.941 112.2 50.7 -53.3 -52.6 0.5 0.1 -6.6 54 54 A E H X S+ 0 0 106 -4,-3.2 4,-2.3 1,-0.3 -1,-0.2 0.814 110.1 49.1 -65.9 -31.3 0.4 -3.7 -6.0 55 55 A R H X S+ 0 0 90 -4,-2.7 4,-2.3 2,-0.2 -1,-0.3 0.898 111.5 49.4 -71.0 -40.8 -0.3 -3.1 -2.3 56 56 A L H X S+ 0 0 35 -4,-2.4 4,-2.0 -5,-0.2 -2,-0.2 0.881 109.1 56.6 -59.1 -37.5 -3.1 -0.7 -3.3 57 57 A I H X S+ 0 0 80 -4,-2.6 4,-1.9 2,-0.2 -2,-0.2 0.952 109.5 41.1 -58.8 -55.0 -4.2 -3.5 -5.6 58 58 A A H X S+ 0 0 47 -4,-2.3 4,-0.5 1,-0.2 -1,-0.2 0.872 117.2 48.8 -64.2 -37.3 -4.6 -6.1 -2.9 59 59 A H H X S+ 0 0 41 -4,-2.3 4,-2.7 2,-0.2 -1,-0.2 0.767 108.5 53.2 -76.7 -26.3 -6.2 -3.6 -0.5 60 60 A R H X S+ 0 0 117 -4,-2.0 4,-1.7 2,-0.2 -1,-0.2 0.834 105.0 55.4 -70.4 -34.1 -8.5 -2.5 -3.3 61 61 A L H < S+ 0 0 93 -4,-1.9 -2,-0.2 2,-0.2 -1,-0.2 0.670 111.9 43.9 -69.8 -20.6 -9.3 -6.2 -3.6 62 62 A A H >X S+ 0 0 15 -4,-0.5 3,-1.6 -5,-0.2 4,-1.0 0.836 108.7 56.3 -80.9 -43.4 -10.1 -5.9 0.1 63 63 A S H 3< S+ 0 0 16 -4,-2.7 -2,-0.2 1,-0.3 -3,-0.2 0.726 87.2 78.5 -63.0 -26.5 -12.0 -2.6 -0.5 64 64 A V T 3< S+ 0 0 104 -4,-1.7 -1,-0.3 1,-0.2 -2,-0.1 0.881 101.4 41.4 -46.4 -41.4 -14.3 -4.4 -3.0 65 65 A N T <4 S+ 0 0 51 -3,-1.6 4,-0.5 -4,-0.2 -2,-0.2 0.994 88.8 134.5 -67.3 -68.8 -16.0 -5.7 0.1 66 66 A L < + 0 0 50 -4,-1.0 3,-0.1 2,-0.1 -2,-0.1 -0.089 56.3 10.0 56.2-154.3 -16.0 -2.5 2.2 67 67 A S S S+ 0 0 88 1,-0.2 2,-2.2 -4,-0.1 -36,-0.0 0.016 121.2 25.3 -48.4 160.7 -19.1 -1.3 4.1 68 68 A R S S+ 0 0 229 2,-0.1 -1,-0.2 1,-0.0 -2,-0.1 -0.441 135.8 20.9 77.5 -64.8 -22.2 -3.4 4.6 69 69 A L S S- 0 0 98 -2,-2.2 2,-0.8 -4,-0.5 3,-0.1 -0.878 77.7-163.2-136.2 103.8 -20.4 -6.7 4.2 70 70 A P - 0 0 79 0, 0.0 -3,-0.1 0, 0.0 -7,-0.1 -0.801 57.2 -13.6 -97.1 110.2 -16.7 -6.6 4.9 71 71 A Y + 0 0 104 -2,-0.8 -9,-0.1 -9,-0.3 -8,-0.0 0.883 48.8 178.3 78.3 113.2 -14.7 -9.6 3.6 72 72 A E + 0 0 97 -3,-0.1 -1,-0.1 2,-0.0 -3,-0.0 -0.659 7.2 168.7-142.7 78.3 -16.0 -12.9 2.5 73 73 A P + 0 0 137 0, 0.0 2,-0.3 0, 0.0 -1,-0.0 0.072 50.7 104.6 -82.5 28.8 -13.1 -15.1 1.4 74 74 A K S S- 0 0 108 1,-0.1 2,-0.1 2,-0.0 -2,-0.0 -0.731 76.2-106.4-113.3 154.5 -15.5 -18.0 1.3 75 75 A L 0 0 158 -2,-0.3 -1,-0.1 1,-0.0 0, 0.0 -0.468 360.0 360.0 -73.5 150.7 -17.2 -20.0 -1.5 76 76 A K 0 0 234 -2,-0.1 -1,-0.0 0, 0.0 -2,-0.0 -0.598 360.0 360.0-133.0 360.0 -20.9 -19.4 -2.0