==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=7-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 11-MAR-99 3ALC . COMPND 2 MOLECULE: PROTEIN (ETHANOL REGULON TRANSCRIPTIONAL . SOURCE 2 ORGANISM_SCIENTIFIC: EMERICELLA NIDULANS; . AUTHOR R.CERDAN,B.CAHUZAC,B.FELENBOK,E.GUITTET . 65 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5346.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 30 46.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 9.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 6.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -1 A G 0 0 93 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -61.8 -4.9 7.3 -6.7 2 0 A S + 0 0 115 3,-0.0 3,-0.1 0, 0.0 0, 0.0 0.890 360.0 12.7 -87.7 -46.8 -4.0 6.4 -10.3 3 1 A M S S+ 0 0 176 1,-0.2 2,-0.7 0, 0.0 0, 0.0 0.894 126.4 51.6 -94.9 -59.0 -1.5 9.1 -11.1 4 2 A A S S+ 0 0 79 2,-0.0 2,-0.3 0, 0.0 -1,-0.2 -0.729 72.4 136.7 -85.8 114.6 -0.6 10.6 -7.7 5 3 A D + 0 0 98 -2,-0.7 2,-0.3 -3,-0.1 -3,-0.0 -0.912 12.6 144.9-160.8 129.5 0.3 7.8 -5.3 6 4 A T - 0 0 80 -2,-0.3 2,-0.6 0, 0.0 4,-0.2 -0.986 38.9-125.3-160.7 158.9 3.1 7.5 -2.7 7 5 A R S S+ 0 0 174 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.917 72.1 85.9-116.6 108.1 3.8 6.0 0.7 8 6 A R S S+ 0 0 164 -2,-0.6 3,-0.3 0, 0.0 -1,-0.1 0.259 84.0 45.4-160.8 -51.5 5.1 8.4 3.4 9 7 A R S S+ 0 0 157 1,-0.2 -2,-0.1 -3,-0.2 47,-0.0 0.762 100.2 68.6 -80.1 -26.7 2.4 10.3 5.2 10 8 A Q S S+ 0 0 72 -4,-0.2 2,-0.6 2,-0.1 -1,-0.2 0.805 84.4 84.8 -64.3 -24.3 0.2 7.2 5.8 11 9 A N + 0 0 28 -3,-0.3 12,-0.0 1,-0.2 7,-0.0 -0.668 52.0 174.8 -80.0 121.2 2.8 6.0 8.2 12 10 A H + 0 0 65 -2,-0.6 -1,-0.2 12,-0.1 18,-0.1 0.595 38.1 122.3 -99.1 -15.7 2.2 7.5 11.6 13 11 A S S S- 0 0 5 1,-0.1 5,-0.1 4,-0.1 10,-0.1 -0.160 70.7-102.3 -50.5 137.5 5.0 5.5 13.3 14 12 A C >> - 0 0 0 3,-0.1 4,-2.5 4,-0.1 3,-0.7 0.010 46.1 -80.4 -57.7 166.7 7.6 7.7 14.9 15 13 A D H 3> S+ 0 0 13 37,-2.9 4,-1.6 1,-0.2 5,-0.2 0.831 126.8 44.9 -34.9 -61.6 11.0 8.3 13.3 16 14 A P H 3> S+ 0 0 20 0, 0.0 4,-1.5 0, 0.0 -1,-0.2 0.841 116.9 43.7 -61.9 -37.1 12.7 5.1 14.4 17 15 A C H <4>S+ 0 0 0 -3,-0.7 5,-3.3 2,-0.2 4,-0.4 0.942 108.6 53.9 -77.1 -48.1 9.9 2.7 13.5 18 16 A R H ><5S+ 0 0 76 -4,-2.5 3,-0.9 1,-0.2 -1,-0.2 0.893 111.7 49.4 -53.5 -36.4 8.9 4.2 10.1 19 17 A K H 3<5S+ 0 0 135 -4,-1.6 -1,-0.2 -5,-0.4 -2,-0.2 0.923 116.1 40.6 -66.5 -45.2 12.6 3.7 9.2 20 18 A G T 3<5S- 0 0 36 -4,-1.5 -1,-0.2 -5,-0.2 -2,-0.2 0.200 119.2-109.1 -89.6 17.1 12.6 0.1 10.5 21 19 A K T < 5S+ 0 0 185 -3,-0.9 2,-0.4 -4,-0.4 -3,-0.2 0.865 71.2 145.7 59.3 38.5 9.1 -0.5 8.9 22 20 A R < - 0 0 82 -5,-3.3 2,-0.6 -8,-0.2 -1,-0.2 -0.899 40.9-147.9-110.2 135.7 7.5 -0.6 12.4 23 21 A R + 0 0 212 -2,-0.4 2,-0.2 -3,-0.1 -12,-0.0 -0.882 25.1 179.4-102.6 124.4 4.0 0.7 13.0 24 22 A C - 0 0 23 -2,-0.6 -12,-0.1 2,-0.2 -11,-0.1 -0.584 44.3-101.7-117.8-177.9 3.5 2.1 16.5 25 23 A D S S+ 0 0 102 -2,-0.2 -1,-0.1 15,-0.0 16,-0.0 0.859 82.3 116.2 -68.8 -37.9 0.8 3.7 18.6 26 24 A A - 0 0 0 2,-0.1 -2,-0.2 1,-0.1 4,-0.1 -0.075 54.4-162.2 -38.1 106.8 2.3 7.1 17.9 27 25 A P > - 0 0 39 0, 0.0 3,-0.7 0, 0.0 4,-0.1 0.184 40.4 -81.4 -77.6-158.1 -0.5 8.9 16.0 28 26 A E T 3 S+ 0 0 138 1,-0.2 3,-0.2 2,-0.1 -2,-0.1 0.542 132.7 48.6 -85.6 -7.2 -0.2 12.0 13.9 29 27 A N T 3> + 0 0 81 1,-0.1 4,-2.2 2,-0.1 -1,-0.2 -0.302 62.7 146.0-126.3 47.4 -0.4 13.9 17.1 30 28 A R H <> S+ 0 0 47 -3,-0.7 4,-2.1 1,-0.2 5,-0.1 0.825 74.9 59.8 -54.3 -30.2 2.1 12.1 19.2 31 29 A N H > S+ 0 0 125 1,-0.2 4,-1.3 2,-0.2 3,-0.4 0.976 108.9 40.5 -62.3 -52.6 2.8 15.6 20.7 32 30 A E H > S+ 0 0 75 1,-0.2 4,-2.9 2,-0.2 -1,-0.2 0.775 108.2 65.2 -65.4 -24.2 -0.7 15.9 21.9 33 31 A A H X>S+ 0 0 8 -4,-2.2 4,-2.5 1,-0.2 5,-2.1 0.931 98.4 52.2 -63.9 -42.6 -0.5 12.2 22.8 34 32 A N H <5S+ 0 0 65 -4,-2.1 -1,-0.2 -3,-0.4 -2,-0.2 0.898 110.7 48.4 -59.0 -40.6 2.1 13.1 25.4 35 33 A E H <5S+ 0 0 127 -4,-1.3 -2,-0.2 1,-0.2 -1,-0.2 0.938 111.5 48.7 -65.1 -47.6 -0.3 15.7 26.8 36 34 A N H <5S- 0 0 118 -4,-2.9 -2,-0.2 -5,-0.1 -1,-0.2 0.836 136.7 -80.6 -62.4 -34.4 -3.2 13.2 26.9 37 35 A G T <5S+ 0 0 61 -4,-2.5 -3,-0.2 1,-0.2 -4,-0.1 0.084 97.1 110.5 155.9 -28.2 -1.0 10.6 28.6 38 36 A W < + 0 0 52 -5,-2.1 -1,-0.2 -6,-0.2 3,-0.1 0.090 29.7 167.7 -59.5-179.0 1.1 9.0 25.9 39 37 A V - 0 0 72 1,-0.2 2,-0.3 -3,-0.1 -5,-0.1 0.239 61.2 -2.3-165.0 -45.1 4.9 9.7 25.7 40 38 A S S S- 0 0 23 -7,-0.1 -1,-0.2 10,-0.0 -15,-0.0 -0.975 75.7 -96.4-161.0 147.8 6.6 7.3 23.3 41 39 A C > - 0 0 0 -2,-0.3 4,-2.6 1,-0.1 5,-0.3 -0.223 42.9-103.8 -65.2 156.8 5.6 4.4 21.2 42 40 A S H > S+ 0 0 62 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.816 121.0 58.4 -52.0 -32.4 6.0 0.9 22.5 43 41 A N H > S+ 0 0 22 2,-0.2 4,-3.3 1,-0.2 5,-0.5 0.986 108.4 41.8 -62.9 -58.3 9.1 0.5 20.2 44 42 A C H >>S+ 0 0 5 1,-0.2 4,-1.6 2,-0.2 5,-1.2 0.920 118.8 46.4 -55.2 -46.3 10.9 3.5 21.7 45 43 A K H <5S+ 0 0 129 -4,-2.6 -1,-0.2 3,-0.2 -2,-0.2 0.831 116.4 46.8 -66.2 -31.4 9.9 2.4 25.2 46 44 A R H <5S+ 0 0 186 -4,-2.2 -2,-0.2 -5,-0.3 -3,-0.2 0.941 127.5 23.8 -75.3 -51.5 10.8 -1.2 24.5 47 45 A W H <5S- 0 0 150 -4,-3.3 -2,-0.2 -5,-0.2 -3,-0.2 0.486 105.7-121.7 -92.5 -6.4 14.2 -0.6 22.8 48 46 A N T <5 + 0 0 138 -4,-1.6 -3,-0.2 -5,-0.5 -4,-0.2 0.996 62.0 145.1 60.7 62.9 14.7 2.7 24.6 49 47 A K < - 0 0 72 -5,-1.2 2,-0.2 -6,-0.1 -5,-0.1 0.501 55.9 -79.7 -98.7-119.4 15.1 4.6 21.4 50 48 A D - 0 0 113 2,-0.1 2,-0.7 -36,-0.0 -35,-0.1 -0.667 29.5-147.1-160.6 96.9 13.9 8.1 20.7 51 49 A C + 0 0 15 -2,-0.2 2,-0.3 -36,-0.1 -37,-0.0 -0.549 42.1 142.9 -70.4 109.7 10.3 8.9 20.0 52 50 A T - 0 0 27 -2,-0.7 -37,-2.9 -12,-0.0 3,-0.3 -0.991 52.6-141.2-147.9 155.4 10.3 11.9 17.6 53 51 A F > + 0 0 23 -2,-0.3 4,-1.4 -39,-0.2 3,-0.1 -0.304 55.9 131.7-110.5 46.7 8.4 13.2 14.6 54 52 A N H > + 0 0 55 1,-0.2 4,-2.7 2,-0.2 -1,-0.2 0.857 69.3 61.9 -65.3 -34.0 11.5 14.5 12.9 55 53 A W H 4 S+ 0 0 14 -3,-0.3 -1,-0.2 1,-0.3 -2,-0.1 0.916 106.1 46.8 -57.2 -40.0 10.3 12.8 9.7 56 54 A L H >4 S+ 0 0 42 1,-0.2 3,-0.8 2,-0.2 4,-0.5 0.803 110.1 54.0 -68.7 -33.3 7.3 15.1 10.0 57 55 A S H 3X S+ 0 0 45 -4,-1.4 6,-0.9 1,-0.2 4,-0.6 0.888 106.2 49.5 -70.7 -42.5 9.6 18.1 10.6 58 56 A S T 3< S+ 0 0 57 -4,-2.7 -1,-0.2 4,-0.3 -2,-0.2 0.211 96.1 83.1 -84.2 16.7 11.7 17.6 7.5 59 57 A Q T <4 S+ 0 0 91 -3,-0.8 -2,-0.1 -5,-0.1 -1,-0.1 0.922 101.2 17.4 -82.3 -86.5 8.6 17.3 5.2 60 58 A R T 4 S+ 0 0 251 -4,-0.5 2,-0.4 1,-0.2 -2,-0.1 0.873 145.4 18.2 -55.0 -36.2 7.2 20.6 4.2 61 59 A S S < S- 0 0 62 -4,-0.6 2,-3.0 2,-0.0 -1,-0.2 -0.997 88.2-112.0-137.5 140.5 10.6 22.1 5.2 62 60 A K - 0 0 195 -2,-0.4 -4,-0.3 -3,-0.1 2,-0.1 -0.377 44.6-168.1 -70.6 71.6 13.9 20.4 5.8 63 61 A N - 0 0 88 -2,-3.0 -5,-0.1 -6,-0.9 -6,-0.1 -0.421 13.6-132.4 -64.9 132.6 13.8 21.0 9.5 64 62 A S 0 0 115 -2,-0.1 -1,-0.1 1,-0.1 -7,-0.0 -0.269 360.0 360.0 -79.9 171.1 17.2 20.3 11.1 65 63 A S 0 0 168 -2,-0.0 -1,-0.1 -8,-0.0 0, 0.0 -0.388 360.0 360.0 -96.5 360.0 17.8 18.2 14.2