==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CHEMOKINE 01-DEC-98 1B2T . COMPND 2 MOLECULE: PROTEIN (FRACTALKINE); . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.M.HANDEL,L.S.MIZOUE,J.F.BAZAN,E.C.JOHNSON . 77 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6369.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 61.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 13 16.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 15.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 10.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 15.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A M 0 0 201 0, 0.0 4,-0.1 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 75.9 24.9 1.3 1.9 2 1 A Q - 0 0 167 2,-0.3 3,-0.1 3,-0.2 0, 0.0 0.911 360.0 -53.6 -83.6 -48.2 28.0 3.3 1.1 3 2 A H S S+ 0 0 164 1,-0.3 2,-0.4 2,-0.2 3,-0.0 0.270 118.4 29.0-157.8 -53.6 28.4 5.2 4.3 4 3 A H S S+ 0 0 164 1,-0.0 -1,-0.3 2,-0.0 -2,-0.3 -0.970 91.5 50.6-127.0 140.4 25.2 7.1 5.3 5 4 A G - 0 0 52 -2,-0.4 -3,-0.2 1,-0.1 -2,-0.2 0.463 46.3-155.6 104.1 116.5 21.6 6.2 4.6 6 5 A V + 0 0 124 -5,-0.1 2,-0.2 2,-0.0 -1,-0.1 -0.378 60.5 96.6-117.6 52.5 19.8 2.9 5.1 7 6 A T - 0 0 124 -2,-0.0 2,-0.1 0, 0.0 3,-0.1 -0.434 47.9-162.5-121.6-163.6 17.0 3.2 2.6 8 7 A K - 0 0 155 1,-0.4 4,-0.1 -2,-0.2 27,-0.0 -0.356 60.0 -17.9 170.9 101.9 16.2 2.1 -1.0 9 8 A a S S- 0 0 42 1,-0.1 3,-0.5 -2,-0.1 -1,-0.4 0.641 71.1-103.4 63.8 131.8 13.6 3.5 -3.3 10 9 A N S S+ 0 0 148 1,-0.3 2,-0.4 -3,-0.1 -1,-0.1 0.888 115.6 22.2 -50.7 -43.9 10.7 5.5 -2.0 11 10 A I S S+ 0 0 32 2,-0.0 2,-0.5 39,-0.0 21,-0.3 -0.837 76.3 175.3-132.2 95.7 8.4 2.5 -2.4 12 11 A T - 0 0 40 -3,-0.5 2,-2.0 -2,-0.4 3,-0.3 -0.884 28.7-138.6-104.7 125.3 10.1 -0.9 -2.5 13 12 A b + 0 0 1 -2,-0.5 24,-0.5 24,-0.3 3,-0.0 -0.524 38.1 158.4 -81.2 75.9 8.0 -4.1 -2.6 14 13 A S S S- 0 0 82 -2,-2.0 2,-0.2 22,-0.1 -1,-0.2 0.856 70.2 -7.4 -66.5 -35.2 10.0 -6.1 -0.2 15 14 A K S S- 0 0 169 -3,-0.3 2,-0.3 22,-0.1 36,-0.1 -0.783 83.7 -82.2-145.4-172.2 7.0 -8.3 0.5 16 15 A M - 0 0 89 -2,-0.2 36,-0.2 1,-0.1 2,-0.1 -0.742 35.4-136.4-103.4 151.3 3.3 -8.7 -0.3 17 16 A T - 0 0 23 34,-1.0 2,-0.2 -2,-0.3 36,-0.2 -0.171 23.8-100.8 -91.5-171.6 0.4 -7.0 1.6 18 17 A S - 0 0 83 1,-0.1 -1,-0.1 -2,-0.1 2,-0.1 -0.574 48.0 -70.2-108.2 172.9 -2.9 -8.4 2.8 19 18 A K - 0 0 154 -2,-0.2 -1,-0.1 33,-0.0 40,-0.0 -0.366 53.4-176.6 -63.9 137.7 -6.4 -8.2 1.4 20 19 A I - 0 0 16 -2,-0.1 2,-0.1 -3,-0.1 5,-0.1 -1.000 34.2 -95.7-141.2 140.5 -8.0 -4.8 1.6 21 20 A P > - 0 0 82 0, 0.0 3,-2.7 0, 0.0 4,-0.4 -0.309 25.6-140.9 -55.6 122.3 -11.5 -3.4 0.7 22 21 A V G > S+ 0 0 46 1,-0.3 3,-1.0 2,-0.2 44,-0.0 0.740 99.7 73.7 -56.9 -22.1 -11.4 -1.9 -2.8 23 22 A A G 3 S+ 0 0 84 1,-0.3 -1,-0.3 21,-0.0 21,-0.0 0.549 95.3 51.6 -69.7 -5.9 -13.7 0.8 -1.4 24 23 A L G < S+ 0 0 40 -3,-2.7 21,-1.8 20,-0.1 22,-0.4 0.553 90.9 93.9-104.8 -13.7 -10.6 2.1 0.4 25 24 A L E < +A 44 0A 15 -3,-1.0 19,-0.3 -4,-0.4 3,-0.1 -0.579 38.0 166.6 -82.9 142.9 -8.4 2.2 -2.8 26 25 A I E + 0 0 63 17,-2.9 2,-0.3 1,-0.4 18,-0.2 0.619 66.2 8.7-123.2 -34.4 -8.2 5.4 -4.7 27 26 A H E -A 43 0A 104 16,-2.3 16,-3.3 43,-0.0 -1,-0.4 -0.993 56.2-152.2-150.9 152.7 -5.2 4.9 -7.1 28 27 A Y E -A 42 0A 72 -2,-0.3 14,-0.2 14,-0.2 2,-0.1 -0.977 15.8-177.5-133.2 121.0 -2.9 2.1 -8.2 29 28 A Q E -A 41 0A 87 12,-1.7 12,-1.9 -2,-0.4 2,-0.4 -0.252 23.8-110.4-101.1-169.1 0.7 2.6 -9.4 30 29 A Q E -A 40 0A 130 10,-0.2 10,-0.2 -2,-0.1 8,-0.0 -0.982 28.8-105.5-131.1 140.9 3.4 0.2 -10.7 31 30 A N - 0 0 16 8,-1.5 2,-0.3 -2,-0.4 -19,-0.1 -0.339 39.2-115.9 -63.0 139.6 6.6 -1.0 -9.1 32 31 A Q >> - 0 0 110 -21,-0.3 3,-2.2 1,-0.1 4,-0.8 -0.583 9.1-133.8 -80.2 137.8 9.8 0.5 -10.7 33 32 A A T 34 S+ 0 0 109 1,-0.3 -1,-0.1 -2,-0.3 5,-0.1 0.615 111.9 46.5 -64.4 -10.3 12.2 -1.8 -12.5 34 33 A S T 34 S+ 0 0 101 0, 0.0 -1,-0.3 0, 0.0 -25,-0.1 0.072 108.4 59.4-117.9 20.7 14.9 -0.0 -10.5 35 34 A a T <4 S- 0 0 27 -3,-2.2 2,-0.2 1,-0.3 -2,-0.1 0.731 104.9 -65.1-109.6 -79.8 13.1 -0.1 -7.2 36 35 A G S < S+ 0 0 31 -4,-0.8 -1,-0.3 -25,-0.2 -22,-0.1 -0.564 86.6 0.2-149.9-145.8 12.3 -3.5 -5.8 37 36 A K S S- 0 0 141 -24,-0.5 2,-1.6 -2,-0.2 -24,-0.3 -0.317 76.1-108.3 -57.7 130.4 10.3 -6.7 -6.5 38 37 A R S S+ 0 0 215 -5,-0.1 -1,-0.1 -3,-0.1 2,-0.1 -0.428 74.7 122.9 -64.2 88.9 8.2 -6.3 -9.6 39 38 A A - 0 0 4 -2,-1.6 -8,-1.5 14,-0.1 2,-0.3 -0.351 60.6 -78.3-126.9-152.6 4.8 -6.0 -7.9 40 39 A I E -AB 30 52A 7 12,-1.7 12,-1.4 -10,-0.2 2,-0.5 -0.918 28.4-134.5-122.4 148.0 1.9 -3.5 -7.8 41 40 A I E -AB 29 51A 2 -12,-1.9 -12,-1.7 -2,-0.3 2,-0.5 -0.888 17.4-164.6-104.9 122.8 1.4 -0.3 -5.9 42 41 A L E -AB 28 50A 4 8,-2.9 8,-2.0 -2,-0.5 2,-0.5 -0.924 3.2-170.5-111.1 121.0 -1.8 0.3 -4.0 43 42 A E E -AB 27 49A 49 -16,-3.3 -17,-2.9 -2,-0.5 -16,-2.3 -0.937 6.4-164.2-112.8 125.1 -2.7 3.8 -2.9 44 43 A T E >> -AB 25 48A 1 4,-0.9 3,-1.6 -2,-0.5 4,-0.6 -0.635 37.8-105.4-104.6 164.1 -5.7 4.4 -0.6 45 44 A R T 34 S+ 0 0 140 -21,-1.8 -20,-0.1 1,-0.3 -1,-0.1 0.642 121.4 61.2 -60.1 -13.1 -7.6 7.5 0.4 46 45 A Q T 34 S- 0 0 119 -22,-0.4 -1,-0.3 2,-0.1 3,-0.1 -0.055 127.0 -98.1-104.5 30.6 -5.8 7.3 3.7 47 46 A H T <4 + 0 0 162 -3,-1.6 2,-0.8 1,-0.2 -2,-0.2 0.921 68.4 162.1 54.4 48.4 -2.4 7.6 2.1 48 47 A R E < -B 44 0A 86 -4,-0.6 -4,-0.9 2,-0.0 2,-0.8 -0.860 15.7-179.7-104.8 104.1 -1.9 3.9 2.1 49 48 A L E +B 43 0A 82 -2,-0.8 2,-0.2 -6,-0.2 -6,-0.2 -0.835 16.4 158.4-107.0 97.0 0.9 2.8 -0.3 50 49 A F E -B 42 0A 86 -8,-2.0 -8,-2.9 -2,-0.8 2,-0.6 -0.721 39.5-122.4-114.3 165.4 1.3 -1.0 -0.1 51 50 A b E +B 41 0A 12 -2,-0.2 -34,-1.0 -10,-0.2 2,-0.3 -0.904 32.3 178.4-113.5 106.7 2.8 -3.5 -2.5 52 51 A A E -B 40 0A 0 -12,-1.4 -12,-1.7 -2,-0.6 -36,-0.1 -0.823 31.1-112.4-108.5 146.7 0.4 -6.3 -3.6 53 52 A D > - 0 0 46 -2,-0.3 3,-1.4 -36,-0.2 6,-0.2 -0.575 19.3-130.2 -78.0 134.1 1.1 -9.1 -6.1 54 53 A P T 3 S+ 0 0 56 0, 0.0 6,-0.2 0, 0.0 -1,-0.1 0.770 107.2 65.5 -52.2 -27.6 -0.8 -9.0 -9.4 55 54 A K T 3 S+ 0 0 144 4,-0.1 5,-0.1 5,-0.1 -3,-0.0 0.888 76.7 102.2 -64.1 -39.7 -1.7 -12.7 -8.7 56 55 A E S X> S- 0 0 40 -3,-1.4 4,-2.0 1,-0.1 3,-0.8 -0.193 71.6-141.3 -48.5 128.3 -3.8 -11.7 -5.7 57 56 A Q H 3>>S+ 0 0 114 1,-0.3 4,-2.4 2,-0.2 5,-0.5 0.954 100.7 58.1 -58.8 -53.7 -7.5 -11.7 -6.6 58 57 A W H 3>5S+ 0 0 15 1,-0.3 4,-0.9 2,-0.2 -1,-0.3 0.732 111.1 47.3 -50.5 -20.6 -8.3 -8.6 -4.6 59 58 A V H <>5S+ 0 0 0 -3,-0.8 4,-2.3 -6,-0.2 -1,-0.3 0.873 107.5 52.8 -88.3 -42.7 -5.7 -7.0 -6.8 60 59 A K H X5S+ 0 0 113 -4,-2.0 4,-2.1 2,-0.2 -2,-0.2 0.961 120.8 33.2 -56.0 -54.9 -6.9 -8.3 -10.1 61 60 A D H X5S+ 0 0 81 -4,-2.4 4,-1.9 1,-0.2 -1,-0.2 0.910 112.6 62.2 -68.5 -43.3 -10.4 -7.1 -9.5 62 61 A A H X< S+ 0 0 72 -4,-1.9 3,-2.6 2,-0.2 -2,-0.2 0.979 105.1 45.1 -75.0 -62.0 -12.3 -1.6 -10.7 66 65 A L H >X S+ 0 0 14 -4,-2.0 4,-1.8 1,-0.3 3,-1.4 0.702 100.6 75.2 -56.1 -18.1 -10.2 1.6 -10.7 67 66 A D T 3< S+ 0 0 60 -4,-1.9 4,-0.3 1,-0.3 -1,-0.3 0.787 102.5 37.4 -65.3 -27.5 -10.1 1.2 -14.4 68 67 A R T <4 S+ 0 0 173 -3,-2.6 -1,-0.3 -4,-0.3 -2,-0.2 0.080 116.1 56.6-110.5 20.9 -13.7 2.5 -14.5 69 68 A Q T <4 S+ 0 0 79 -3,-1.4 -2,-0.2 2,-0.1 -3,-0.1 0.750 96.8 52.1-113.5 -58.9 -13.3 5.0 -11.8 70 69 A A S X S+ 0 0 53 -4,-1.8 4,-0.6 1,-0.2 6,-0.3 0.917 108.8 54.1 -46.3 -53.1 -10.5 7.4 -12.7 71 70 A A T 4 S+ 0 0 60 -4,-0.3 -1,-0.2 -5,-0.3 5,-0.1 0.928 96.9 79.8 -48.2 -54.1 -12.1 8.1 -16.1 72 71 A A T 4 S+ 0 0 48 1,-0.2 2,-2.6 -3,-0.1 -3,-0.1 0.104 100.8 11.5 -48.4 169.6 -15.4 9.1 -14.4 73 72 A L T 4 S+ 0 0 181 2,-0.1 2,-0.6 1,-0.0 -1,-0.2 -0.297 137.1 34.4 58.5 -77.3 -15.8 12.5 -12.9 74 73 A T < - 0 0 90 -2,-2.6 2,-1.0 -4,-0.6 -1,-0.0 -0.926 66.5-163.0-113.1 113.6 -12.6 13.8 -14.5 75 74 A R + 0 0 214 -2,-0.6 2,-0.1 1,-0.2 -4,-0.1 -0.250 63.6 103.0 -86.9 47.7 -11.7 12.4 -18.0 76 75 A N 0 0 134 -2,-1.0 -1,-0.2 -6,-0.3 -5,-0.0 -0.523 360.0 360.0-128.9 65.0 -8.1 13.6 -17.7 77 76 A G 0 0 143 -2,-0.1 -2,-0.0 -6,-0.0 0, 0.0 0.323 360.0 360.0 -67.3 360.0 -6.0 10.5 -16.9