==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=25-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER COLLAGEN FACIT XIV 15-FEB-99 1B9P . COMPND 2 MOLECULE: PROTEIN (COLLAGEN ALPHA 1); . SOURCE 2 SYNTHETIC: YES; . AUTHOR R.MONTSERRET,G.DELEAGE,F.PENIN . 34 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4270.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 22 64.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 8.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 50.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A C 0 0 181 0, 0.0 2,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 160.7 -23.8 6.5 5.5 2 2 A A - 0 0 83 1,-0.1 2,-0.5 2,-0.0 0, 0.0 -0.392 360.0-144.6 -70.5 148.4 -22.0 3.2 6.3 3 3 A V > - 0 0 91 -2,-0.1 3,-1.4 4,-0.0 4,-0.2 -0.560 65.3 -69.1-115.0 67.2 -21.0 1.0 3.3 4 4 A E T 3 S- 0 0 172 -2,-0.5 3,-0.1 1,-0.3 -2,-0.0 0.591 73.0 -92.9 61.3 12.0 -21.5 -2.5 4.8 5 5 A L T 3 S+ 0 0 156 1,-0.2 -1,-0.3 2,-0.1 -3,-0.0 0.748 122.5 44.3 56.5 24.0 -18.4 -1.9 7.1 6 6 A R < + 0 0 208 -3,-1.4 3,-0.2 0, 0.0 -1,-0.2 0.225 64.1 161.8-153.0 -69.6 -16.2 -3.6 4.4 7 7 A S > - 0 0 48 -4,-0.2 2,-2.4 1,-0.2 4,-0.6 0.858 32.0-147.4 31.7 87.8 -16.9 -2.4 0.8 8 8 A P T 4 + 0 0 69 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.325 67.5 104.4 -76.4 60.1 -13.8 -3.4 -1.2 9 9 A G T 4 S+ 0 0 49 -2,-2.4 4,-0.5 -3,-0.2 5,-0.1 0.772 96.2 4.9-102.1 -82.3 -14.1 -0.4 -3.6 10 10 A I T > S+ 0 0 130 -3,-0.3 4,-3.7 2,-0.2 3,-0.5 0.866 132.9 57.8 -73.8 -34.8 -11.5 2.3 -2.7 11 11 A S H X S+ 0 0 57 -4,-0.6 4,-2.4 1,-0.2 5,-0.2 0.968 108.5 44.0 -59.9 -53.0 -10.0 -0.1 -0.0 12 12 A R H 4 S+ 0 0 185 -5,-0.2 4,-0.3 1,-0.2 -1,-0.2 0.641 119.9 45.6 -67.1 -11.8 -9.3 -2.9 -2.6 13 13 A F H > S+ 0 0 138 -3,-0.5 4,-1.2 -4,-0.5 -2,-0.2 0.845 115.8 41.7 -95.9 -47.2 -7.9 -0.1 -5.0 14 14 A R H X S+ 0 0 143 -4,-3.7 4,-2.4 1,-0.2 5,-0.2 0.820 104.2 66.1 -72.5 -32.1 -5.7 1.9 -2.5 15 15 A R H X S+ 0 0 194 -4,-2.4 4,-1.8 -5,-0.3 -1,-0.2 0.908 104.7 45.2 -58.3 -40.8 -4.2 -1.2 -0.8 16 16 A K H > S+ 0 0 146 -4,-0.3 4,-1.8 -5,-0.2 -1,-0.2 0.909 110.0 54.6 -69.2 -40.9 -2.4 -2.1 -4.0 17 17 A I H X S+ 0 0 94 -4,-1.2 4,-1.6 1,-0.2 -2,-0.2 0.924 109.2 48.3 -58.7 -44.4 -1.3 1.5 -4.6 18 18 A A H X S+ 0 0 40 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.918 105.4 58.6 -63.1 -43.1 0.3 1.5 -1.0 19 19 A K H X S+ 0 0 139 -4,-1.8 4,-2.0 1,-0.2 -1,-0.2 0.912 106.4 48.5 -52.7 -46.6 2.1 -1.9 -1.7 20 20 A R H X S+ 0 0 205 -4,-1.8 4,-1.4 1,-0.2 -1,-0.2 0.900 112.0 48.6 -63.2 -42.1 3.9 -0.4 -4.8 21 21 A S H X S+ 0 0 74 -4,-1.6 4,-1.4 -5,-0.2 -2,-0.2 0.868 110.7 50.7 -68.5 -36.2 5.0 2.7 -2.7 22 22 A I H X S+ 0 0 90 -4,-2.4 4,-2.3 2,-0.2 3,-0.3 0.959 107.1 52.0 -67.8 -50.9 6.3 0.6 0.2 23 23 A K H X S+ 0 0 135 -4,-2.0 4,-2.2 1,-0.2 -1,-0.2 0.898 110.8 48.4 -52.7 -44.6 8.5 -1.8 -1.9 24 24 A T H X S+ 0 0 84 -4,-1.4 4,-0.7 1,-0.2 -1,-0.2 0.863 110.4 52.5 -65.9 -34.7 10.2 1.2 -3.6 25 25 A L H >X S+ 0 0 84 -4,-1.4 4,-1.9 -3,-0.3 3,-0.6 0.930 111.0 45.6 -67.6 -44.9 10.9 2.8 -0.2 26 26 A E H 3X>S+ 0 0 100 -4,-2.3 4,-1.6 1,-0.2 5,-0.9 0.918 107.2 58.4 -65.4 -42.7 12.5 -0.4 1.2 27 27 A H H 3<5S+ 0 0 128 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.740 114.4 38.6 -60.5 -21.6 14.7 -0.9 -1.9 28 28 A K H <<5S+ 0 0 143 -4,-0.7 -1,-0.2 -3,-0.6 -2,-0.2 0.724 121.7 41.7-100.6 -26.5 16.2 2.7 -1.4 29 29 A R H ><5S+ 0 0 177 -4,-1.9 3,-0.9 2,-0.1 -3,-0.2 0.958 121.9 34.1 -84.7 -61.6 16.4 2.5 2.5 30 30 A E T 3<5S+ 0 0 171 -4,-1.6 -3,-0.2 1,-0.2 -4,-0.1 0.914 118.5 53.7 -61.3 -43.5 17.8 -1.0 3.2 31 31 A N T 3