==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=22-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 14-OCT-05 2BAI . COMPND 2 MOLECULE: GENOME POLYPROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MENGO VIRUS; . AUTHOR C.C.CORNILESCU,F.W.PORTER,Z.QIN,M.S.LEE,A.C.PALMENBERG, . 32 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3347.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 11 34.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 15.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 12.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 207 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -58.3 -19.1 -2.5 0.9 2 2 A A - 0 0 81 1,-0.2 0, 0.0 0, 0.0 0, 0.0 0.822 360.0 -77.2 63.0 31.9 -17.8 -5.2 3.2 3 3 A T S S+ 0 0 119 1,-0.1 2,-0.3 2,-0.0 -1,-0.2 0.924 96.9 128.0 40.0 77.1 -14.3 -3.9 2.4 4 4 A T + 0 0 96 -3,-0.1 -1,-0.1 1,-0.0 0, 0.0 -0.867 2.7 114.3-163.2 124.6 -14.0 -5.5 -1.0 5 5 A M - 0 0 135 -2,-0.3 -1,-0.0 4,-0.0 -2,-0.0 0.330 53.3-138.5-154.6 -47.7 -13.0 -4.1 -4.4 6 6 A E + 0 0 161 3,-0.1 9,-0.0 1,-0.0 -2,-0.0 0.949 64.8 103.6 71.4 91.4 -9.8 -5.6 -5.6 7 7 A Q S S- 0 0 123 7,-0.1 -1,-0.0 2,-0.0 8,-0.0 0.190 99.1 -73.0 170.4 40.5 -7.7 -2.9 -7.2 8 8 A E + 0 0 110 1,-0.2 7,-0.4 0, 0.0 2,-0.3 0.968 67.5 165.7 52.3 86.3 -4.9 -1.9 -4.8 9 9 A I + 0 0 83 4,-0.1 6,-0.2 2,-0.0 2,-0.2 -0.785 10.4 146.1-135.4 89.1 -6.8 0.1 -2.1 10 10 A C - 0 0 34 -2,-0.3 5,-0.1 5,-0.1 6,-0.1 -0.528 66.0 -94.7-113.3-178.7 -4.8 0.6 1.0 11 11 A A S S+ 0 0 99 -2,-0.2 4,-0.1 1,-0.2 8,-0.0 0.254 128.2 34.0 -81.0 12.9 -4.5 3.5 3.5 12 12 A H S S- 0 0 88 2,-0.1 -1,-0.2 3,-0.0 3,-0.1 0.570 132.6 -74.3-130.3 -45.9 -1.6 4.7 1.4 13 13 A S S S+ 0 0 84 1,-0.1 2,-0.2 2,-0.0 -2,-0.1 0.440 98.6 68.7 143.5 45.9 -2.4 3.8 -2.2 14 14 A M S S- 0 0 38 5,-0.0 2,-0.2 2,-0.0 -2,-0.1 -0.794 80.4 -66.3-156.8-162.9 -1.9 0.1 -2.6 15 15 A T >> - 0 0 32 -7,-0.4 3,-0.8 -2,-0.2 4,-0.7 -0.659 47.7-102.5-102.5 159.4 -3.3 -3.3 -1.8 16 16 A F G >4 S+ 0 0 145 1,-0.3 3,-1.5 2,-0.3 -1,-0.1 0.893 128.1 43.0 -41.7 -54.3 -3.4 -5.1 1.6 17 17 A E G 34 S+ 0 0 151 1,-0.3 -1,-0.3 2,-0.2 -7,-0.0 0.781 117.2 48.0 -64.6 -27.6 -0.4 -7.2 0.6 18 18 A E G X> S+ 0 0 70 -3,-0.8 3,-1.4 1,-0.2 4,-0.9 0.338 84.4 94.5 -93.3 4.5 1.1 -4.1 -0.9 19 19 A C H XX S+ 0 0 44 -3,-1.5 3,-0.6 -4,-0.7 4,-0.6 0.857 82.6 54.6 -62.2 -35.6 0.3 -2.2 2.3 20 20 A P H 3> S+ 0 0 86 0, 0.0 4,-0.9 0, 0.0 -1,-0.3 0.521 105.4 54.7 -75.1 -5.6 3.8 -3.1 3.5 21 21 A K H <4 S+ 0 0 79 -3,-1.4 -2,-0.2 -6,-0.3 9,-0.1 0.612 85.0 81.4 -98.7 -19.1 5.0 -1.5 0.3 22 22 A C H << S+ 0 0 5 -4,-0.9 3,-0.2 -3,-0.6 -1,-0.1 0.912 113.2 20.1 -51.3 -46.5 3.2 1.8 1.0 23 23 A S H < S+ 0 0 36 -4,-0.6 2,-2.6 9,-0.2 7,-0.6 0.860 118.7 65.2 -89.8 -44.1 6.1 2.7 3.2 24 24 A A < + 0 0 35 -4,-0.9 -1,-0.2 8,-0.2 7,-0.1 -0.370 61.5 129.1 -78.4 60.2 8.7 0.3 1.8 25 25 A L S S- 0 0 69 -2,-2.6 -1,-0.2 5,-0.3 3,-0.1 0.203 75.5-123.6 -98.1 12.6 8.6 2.1 -1.5 26 26 A Q S S+ 0 0 162 1,-0.2 2,-0.2 -3,-0.2 -2,-0.1 0.761 85.2 84.5 49.7 26.1 12.4 2.4 -1.5 27 27 A Y S > S- 0 0 183 3,-0.4 3,-0.8 -4,-0.4 -2,-0.2 -0.679 106.0 -76.9-138.2-168.9 11.8 6.1 -1.8 28 28 A R T 3 S+ 0 0 228 1,-0.2 3,-0.1 -2,-0.2 -2,-0.1 0.506 110.1 87.9 -74.1 -4.1 11.0 9.2 0.2 29 29 A N T 3 S- 0 0 109 1,-0.2 2,-0.3 -4,-0.1 -1,-0.2 0.941 107.6 -35.9 -58.5 -50.3 7.5 7.8 0.4 30 30 A G < - 0 0 18 -3,-0.8 -3,-0.4 -7,-0.6 -5,-0.3 -0.965 37.3-152.9-164.4 173.2 8.3 5.9 3.5 31 31 A F 0 0 193 -2,-0.3 -5,-0.1 -7,-0.1 -1,-0.1 0.635 360.0 360.0-123.9 -42.1 11.0 3.8 5.3 32 32 A Y 0 0 244 -9,-0.0 -8,-0.2 -8,-0.0 -9,-0.2 0.478 360.0 360.0-140.7 360.0 9.1 1.4 7.5