==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ZINC-FINGER PROTEIN 16-FEB-05 2BKF . COMPND 2 MOLECULE: ZINC-FINGER PROTEIN NBR1 (NEXT TO BREAST CANCER 1 . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.MUELLER,I.KURSULA,M.WILMANNS . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5188.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 66 76.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 6 7.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 22.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 6 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 21 24.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 0 A A 0 0 147 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 146.8 22.5 73.9 19.6 2 1 A M - 0 0 104 1,-0.1 0, 0.0 2,-0.0 0, 0.0 0.576 360.0-119.2-170.3 143.3 20.2 75.0 17.9 3 2 A E - 0 0 21 1,-0.1 22,-0.3 20,-0.1 -1,-0.1 -0.194 44.6-131.9 -58.3 133.7 18.3 76.8 15.1 4 3 A P - 0 0 63 0, 0.0 -1,-0.1 0, 0.0 17,-0.1 -0.205 46.3 -55.3 -75.6 175.4 16.2 79.8 16.3 5 4 A Q - 0 0 92 18,-0.1 2,-0.4 19,-0.1 17,-0.2 -0.188 58.7-155.6 -48.8 134.8 12.6 80.4 15.4 6 5 A V E -A 21 0A 0 15,-2.3 15,-3.1 -3,-0.1 2,-0.5 -0.920 7.5-140.6-115.5 145.8 12.1 80.6 11.7 7 6 A T E -Ab 20 78A 32 70,-2.2 72,-2.3 -2,-0.4 2,-0.6 -0.930 10.4-158.2-104.0 123.3 9.3 82.4 9.8 8 7 A L E -Ab 19 79A 0 11,-2.8 11,-2.8 -2,-0.5 2,-0.8 -0.918 2.8-162.9-101.2 115.2 7.9 80.7 6.8 9 8 A N E -Ab 18 80A 20 70,-3.0 72,-3.3 -2,-0.6 2,-0.6 -0.890 15.5-169.4-100.6 106.6 6.2 83.2 4.5 10 9 A V E -Ab 17 81A 0 7,-3.3 7,-2.3 -2,-0.8 2,-0.4 -0.897 7.5-163.0-112.9 117.8 4.1 81.0 2.2 11 10 A T E +Ab 16 82A 34 70,-2.6 72,-3.1 -2,-0.6 2,-0.4 -0.839 11.4 176.5 -98.9 132.6 2.3 82.3 -0.9 12 11 A F E > -A 15 0A 23 3,-2.8 3,-2.4 -2,-0.4 2,-0.2 -0.934 69.3 -52.6-131.0 111.7 -0.5 80.5 -2.6 13 12 A K T 3 S- 0 0 141 70,-0.5 70,-0.0 -2,-0.4 71,-0.0 -0.448 122.9 -20.8 59.0-120.3 -1.9 82.5 -5.5 14 13 A N T 3 S+ 0 0 174 -2,-0.2 2,-0.4 -3,-0.1 -1,-0.3 0.158 121.1 92.1-105.8 19.8 -2.7 86.0 -4.0 15 14 A E E < -A 12 0A 89 -3,-2.4 -3,-2.8 2,-0.0 2,-0.4 -0.899 52.7-172.8-108.5 141.1 -2.8 84.8 -0.4 16 15 A I E -A 11 0A 100 -2,-0.4 2,-0.4 -5,-0.2 -5,-0.2 -1.000 3.8-176.3-134.0 137.1 0.2 84.8 1.9 17 16 A Q E -A 10 0A 63 -7,-2.3 -7,-3.3 -2,-0.4 2,-0.5 -0.994 14.7-147.1-127.4 141.5 0.5 83.4 5.3 18 17 A S E -A 9 0A 70 -2,-0.4 2,-0.5 -9,-0.2 -9,-0.2 -0.898 10.7-162.9-105.0 130.6 3.4 83.6 7.7 19 18 A F E -A 8 0A 22 -11,-2.8 -11,-2.8 -2,-0.5 2,-0.7 -0.963 9.5-149.6-113.1 122.0 4.0 80.7 10.0 20 19 A L E -A 7 0A 110 -2,-0.5 2,-0.6 -13,-0.2 -13,-0.2 -0.848 15.0-165.6 -89.6 116.0 6.3 81.3 13.0 21 20 A V E -A 6 0A 14 -15,-3.1 -15,-2.3 -2,-0.7 6,-0.1 -0.912 4.1-160.0-108.3 109.4 7.9 77.9 13.7 22 21 A S S S+ 0 0 88 -2,-0.6 -1,-0.1 1,-0.3 -15,-0.0 0.831 78.6 17.6 -63.7 -40.9 9.6 78.0 17.0 23 22 A D > + 0 0 62 1,-0.1 3,-2.4 -18,-0.1 -1,-0.3 -0.636 65.3 179.4-137.7 76.1 12.1 75.1 16.9 24 23 A P G > S+ 0 0 1 0, 0.0 3,-1.6 0, 0.0 -1,-0.1 0.770 80.0 60.6 -58.5 -31.1 12.7 74.2 13.3 25 24 A E G 3 S+ 0 0 115 -22,-0.3 41,-0.0 1,-0.3 -2,-0.0 0.710 103.1 56.5 -63.3 -20.6 15.2 71.5 14.0 26 25 A N G < S+ 0 0 122 -3,-2.4 2,-0.3 2,-0.1 -1,-0.3 -0.011 97.3 83.3 -99.3 27.6 12.4 69.9 15.9 27 26 A T < - 0 0 25 -3,-1.6 2,-0.3 -6,-0.1 3,-0.0 -0.904 64.7-139.6-128.2 157.6 10.1 69.8 13.0 28 27 A T > - 0 0 52 -2,-0.3 4,-1.8 1,-0.1 5,-0.1 -0.845 23.5-124.1-112.1 151.9 9.5 67.5 10.0 29 28 A W H > S+ 0 0 10 -2,-0.3 4,-3.2 1,-0.2 5,-0.3 0.889 113.7 60.8 -57.2 -38.3 8.8 68.5 6.4 30 29 A A H > S+ 0 0 66 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.917 104.6 48.8 -56.4 -40.8 5.6 66.3 6.7 31 30 A D H > S+ 0 0 94 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.893 112.5 46.9 -65.7 -42.3 4.4 68.6 9.5 32 31 A I H X S+ 0 0 4 -4,-1.8 4,-2.2 2,-0.2 -2,-0.2 0.948 112.2 49.7 -65.7 -50.1 5.1 71.8 7.5 33 32 A E H X S+ 0 0 43 -4,-3.2 4,-2.6 1,-0.2 -2,-0.2 0.914 110.2 51.9 -53.7 -43.6 3.4 70.4 4.4 34 33 A A H X S+ 0 0 47 -4,-2.3 4,-2.4 -5,-0.3 5,-0.2 0.912 108.0 51.3 -63.0 -39.5 0.4 69.4 6.5 35 34 A M H X S+ 0 0 61 -4,-2.1 4,-2.1 1,-0.2 -1,-0.2 0.913 111.7 46.6 -62.6 -42.5 0.2 72.9 7.9 36 35 A V H X S+ 0 0 0 -4,-2.2 4,-2.5 2,-0.2 -2,-0.2 0.915 112.2 51.2 -66.6 -42.2 0.3 74.5 4.5 37 36 A K H X>S+ 0 0 63 -4,-2.6 5,-1.7 2,-0.2 4,-1.1 0.910 112.8 45.4 -58.6 -46.1 -2.3 72.0 3.2 38 37 A V H <5S+ 0 0 121 -4,-2.4 3,-0.3 -5,-0.2 -1,-0.2 0.921 113.6 50.0 -67.6 -40.3 -4.7 72.7 6.0 39 38 A S H <5S+ 0 0 46 -4,-2.1 -2,-0.2 -5,-0.2 -1,-0.2 0.949 123.0 28.2 -64.6 -49.1 -4.2 76.4 5.7 40 39 A F H <5S- 0 0 15 -4,-2.5 -1,-0.2 -5,-0.1 -2,-0.2 0.362 105.6-116.6 -97.0 3.9 -4.8 76.7 2.0 41 40 A D T <5 + 0 0 148 -4,-1.1 2,-0.3 -3,-0.3 -3,-0.2 0.948 62.2 151.0 57.0 55.7 -7.2 73.7 1.6 42 41 A L < - 0 0 15 -5,-1.7 -1,-0.2 1,-0.2 3,-0.1 -0.850 33.8-174.6-117.1 149.5 -4.8 71.8 -0.7 43 42 A N S S+ 0 0 128 1,-0.4 2,-0.5 -2,-0.3 -1,-0.2 0.785 77.7 26.5-102.0 -72.3 -4.3 68.1 -1.3 44 43 A T S S+ 0 0 83 -7,-0.0 42,-3.6 2,-0.0 -1,-0.4 -0.831 81.3 167.3 -99.1 125.0 -1.4 67.5 -3.6 45 44 A I E -C 85 0A 15 -2,-0.5 2,-0.4 40,-0.3 40,-0.2 -0.903 33.1-151.7-134.2 156.7 1.1 70.3 -3.5 46 45 A Q E -C 84 0A 69 38,-2.2 38,-2.5 -2,-0.3 2,-0.5 -0.996 18.7-161.6-123.4 131.5 4.6 71.4 -4.5 47 46 A I E -CD 83 59A 0 12,-0.6 12,-2.8 -2,-0.4 2,-0.3 -0.952 8.4-175.3-113.5 130.5 6.3 73.9 -2.3 48 47 A K E -CD 82 58A 75 34,-2.8 34,-2.7 -2,-0.5 2,-0.3 -0.865 5.9-158.0-116.2 155.3 9.3 75.9 -3.6 49 48 A Y E -CD 81 57A 26 8,-2.3 8,-2.4 -2,-0.3 2,-0.7 -0.953 26.9-107.1-129.1 159.6 11.6 78.4 -1.8 50 49 A L E - D 0 56A 54 30,-2.0 30,-0.3 -2,-0.3 6,-0.2 -0.734 42.9-162.4 -83.6 113.4 13.8 81.2 -2.9 51 50 A D > - 0 0 24 4,-2.4 3,-1.9 -2,-0.7 -1,-0.0 -0.132 38.0 -84.7 -89.3-174.0 17.4 80.0 -2.4 52 51 A E T 3 S+ 0 0 94 1,-0.3 -1,-0.0 2,-0.1 -2,-0.0 0.794 130.0 56.7 -64.1 -30.2 20.8 81.9 -2.2 53 52 A E T 3 S- 0 0 139 2,-0.1 -1,-0.3 1,-0.0 3,-0.1 0.264 118.1-117.2 -81.8 10.6 21.0 82.0 -6.0 54 53 A N S < S+ 0 0 125 -3,-1.9 2,-0.3 1,-0.2 -2,-0.1 0.806 73.2 130.6 56.7 35.1 17.5 83.7 -5.9 55 54 A E - 0 0 116 -6,-0.1 -4,-2.4 2,-0.0 2,-0.5 -0.891 64.3-113.0-115.5 147.1 15.9 80.7 -7.7 56 55 A E E -D 50 0A 74 -2,-0.3 2,-0.4 -6,-0.2 -6,-0.2 -0.693 39.0-178.7 -78.2 123.5 12.8 78.8 -6.8 57 56 A V E -D 49 0A 45 -8,-2.4 -8,-2.3 -2,-0.5 2,-0.1 -0.984 25.0-118.5-128.4 136.8 13.7 75.3 -5.8 58 57 A S E -D 48 0A 36 -2,-0.4 2,-0.6 -10,-0.3 -10,-0.3 -0.410 13.2-145.5 -74.3 144.8 11.2 72.6 -4.8 59 58 A I E +D 47 0A 1 -12,-2.8 -12,-0.6 1,-0.1 3,-0.1 -0.977 31.4 158.5-106.8 118.8 11.3 71.0 -1.3 60 59 A N + 0 0 83 -2,-0.6 2,-0.3 1,-0.1 -1,-0.1 0.267 55.7 26.8-124.7 9.7 10.3 67.4 -1.7 61 60 A S S > S- 0 0 49 1,-0.1 4,-2.1 -32,-0.0 5,-0.2 -0.987 82.0 -96.2-167.6 161.0 11.8 65.8 1.3 62 61 A Q H > S+ 0 0 65 -2,-0.3 4,-2.6 1,-0.2 5,-0.2 0.896 122.1 51.5 -53.2 -42.6 13.0 66.1 4.9 63 62 A G H > S+ 0 0 41 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.898 108.6 48.4 -67.6 -40.7 16.5 66.6 3.7 64 63 A E H > S+ 0 0 79 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.849 112.3 51.6 -66.0 -33.8 15.7 69.3 1.3 65 64 A Y H X S+ 0 0 0 -4,-2.1 4,-2.4 2,-0.2 -2,-0.2 0.935 108.2 50.1 -65.5 -48.2 13.7 71.0 4.1 66 65 A E H X S+ 0 0 101 -4,-2.6 4,-1.6 1,-0.2 -2,-0.2 0.874 111.0 49.8 -60.2 -35.5 16.7 70.7 6.5 67 66 A E H X S+ 0 0 105 -4,-2.1 4,-1.4 2,-0.2 -1,-0.2 0.894 107.9 52.9 -71.1 -38.2 18.9 72.3 3.8 68 67 A A H X S+ 0 0 0 -4,-1.8 4,-2.1 1,-0.2 -2,-0.2 0.899 108.2 52.3 -60.1 -42.1 16.4 75.1 3.3 69 68 A L H X S+ 0 0 5 -4,-2.4 4,-1.9 2,-0.2 -2,-0.2 0.851 102.3 57.6 -62.9 -36.7 16.5 75.7 7.1 70 69 A K H X S+ 0 0 124 -4,-1.6 4,-0.8 1,-0.2 -1,-0.2 0.882 109.8 46.4 -59.9 -38.3 20.3 76.0 7.1 71 70 A M H >X S+ 0 0 7 -4,-1.4 4,-1.1 2,-0.2 3,-0.8 0.907 105.7 57.9 -68.5 -43.7 19.9 78.8 4.6 72 71 A A H ><>S+ 0 0 0 -4,-2.1 5,-2.3 1,-0.3 6,-0.7 0.868 100.7 58.8 -55.4 -38.9 17.2 80.5 6.6 73 72 A V H 3<5S+ 0 0 69 -4,-1.9 3,-0.5 1,-0.2 -1,-0.3 0.849 109.3 43.4 -55.2 -40.3 19.6 80.7 9.5 74 73 A K H <<5S+ 0 0 142 -3,-0.8 -1,-0.2 -4,-0.8 -2,-0.2 0.621 112.3 56.7 -82.3 -15.3 22.0 82.7 7.4 75 74 A Q T X<5S- 0 0 79 -4,-1.1 3,-0.5 -3,-0.6 -1,-0.2 -0.327 129.0 -75.3-119.7 48.9 19.2 84.8 5.9 76 75 A G T 3 5S- 0 0 55 -3,-0.5 -3,-0.2 1,-0.2 -2,-0.1 0.740 79.9 -74.5 71.4 23.8 17.4 86.4 8.9 77 76 A N T 3