==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 16-JAN-08 3BYR . COMPND 2 MOLECULE: CZRB PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; . AUTHOR V.CHEREZOV,V.SRINIVASAN,D.M.E.SZEBENYI,M.CAFFREY . 88 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6079.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 69.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 9 10.2 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 11.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 10.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 33.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 4 A D 0 0 223 0, 0.0 32,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-104.5 34.4 32.3 13.5 2 5 A E + 0 0 143 30,-0.1 32,-0.6 31,-0.1 0, 0.0 0.540 360.0 116.8 -88.9 -3.8 33.2 32.7 17.1 3 6 A G S S- 0 0 44 30,-0.2 30,-0.2 1,-0.1 31,-0.1 -0.117 73.7-104.9 -57.7 154.1 30.6 29.9 16.7 4 7 A L - 0 0 10 1,-0.2 28,-0.1 36,-0.2 -1,-0.1 -0.268 64.4 -63.5 -64.4 165.9 30.7 26.7 18.7 5 8 A P >> - 0 0 69 0, 0.0 4,-2.0 0, 0.0 3,-1.2 -0.326 48.4-120.1 -54.5 135.2 31.9 23.6 16.7 6 9 A P H 3> S+ 0 0 104 0, 0.0 4,-2.3 0, 0.0 5,-0.2 0.851 114.7 58.9 -43.1 -37.5 29.4 22.8 13.9 7 10 A E H 3> S+ 0 0 122 1,-0.2 4,-1.7 2,-0.2 5,-0.1 0.881 107.3 45.3 -61.6 -39.8 28.9 19.4 15.5 8 11 A E H <> S+ 0 0 27 -3,-1.2 4,-2.3 2,-0.2 -1,-0.2 0.873 109.0 54.9 -73.1 -40.9 27.8 21.0 18.8 9 12 A V H X S+ 0 0 18 -4,-2.0 4,-2.4 1,-0.2 -2,-0.2 0.926 108.7 49.4 -56.6 -46.3 25.5 23.5 17.0 10 13 A E H X S+ 0 0 100 -4,-2.3 4,-2.7 2,-0.2 5,-0.2 0.882 108.2 52.3 -65.6 -38.3 23.7 20.6 15.3 11 14 A R H X S+ 0 0 112 -4,-1.7 4,-2.0 2,-0.2 -1,-0.2 0.924 111.5 47.9 -58.5 -43.7 23.3 18.7 18.6 12 15 A I H X S+ 0 0 0 -4,-2.3 4,-2.4 2,-0.2 -2,-0.2 0.902 111.5 50.9 -60.8 -41.9 21.7 21.8 20.1 13 16 A R H X S+ 0 0 64 -4,-2.4 4,-2.9 2,-0.2 -2,-0.2 0.942 109.8 48.1 -62.9 -49.8 19.5 22.1 17.0 14 17 A A H X S+ 0 0 56 -4,-2.7 4,-1.7 1,-0.2 -1,-0.2 0.882 111.5 51.9 -59.3 -40.5 18.3 18.5 17.2 15 18 A F H X S+ 0 0 48 -4,-2.0 4,-1.6 -5,-0.2 -1,-0.2 0.919 112.4 44.2 -60.9 -49.3 17.6 19.0 20.9 16 19 A L H X S+ 0 0 0 -4,-2.4 4,-1.8 1,-0.2 -2,-0.2 0.910 109.2 57.0 -61.4 -45.5 15.5 22.1 20.3 17 20 A Q H < S+ 0 0 105 -4,-2.9 4,-0.4 1,-0.2 -1,-0.2 0.864 109.2 45.8 -57.8 -36.8 13.6 20.5 17.4 18 21 A E H >< S+ 0 0 118 -4,-1.7 3,-0.7 1,-0.2 -1,-0.2 0.881 112.4 51.7 -69.4 -39.3 12.5 17.6 19.6 19 22 A R H 3< S+ 0 0 123 -4,-1.6 -2,-0.2 1,-0.2 -1,-0.2 0.694 107.6 50.6 -73.6 -26.4 11.5 20.0 22.4 20 23 A I T >X S+ 0 0 9 -4,-1.8 3,-2.9 -5,-0.1 4,-1.6 0.464 74.9 136.4 -92.6 -2.3 9.3 22.3 20.2 21 24 A R T <4 S- 0 0 165 -3,-0.7 4,-0.1 -4,-0.4 -3,-0.1 -0.238 86.1 -4.7 -47.5 122.0 7.3 19.4 18.7 22 25 A G T 34 S+ 0 0 85 2,-0.4 -1,-0.3 1,-0.1 3,-0.1 0.454 127.1 76.1 73.5 3.4 3.6 20.6 18.6 23 26 A R T <4 S+ 0 0 115 -3,-2.9 2,-0.3 1,-0.3 -2,-0.2 0.528 102.1 11.9-119.8 -18.0 4.5 23.7 20.5 24 27 A A < - 0 0 20 -4,-1.6 -2,-0.4 23,-0.1 -1,-0.3 -0.970 65.6-121.5-157.1 163.3 6.1 25.9 17.8 25 28 A L S S- 0 0 71 21,-3.0 2,-0.3 1,-0.3 22,-0.2 0.881 81.6 -40.0 -80.4 -39.8 6.5 26.0 14.0 26 29 A E E -A 46 0A 32 20,-1.0 20,-2.5 -5,-0.0 2,-0.4 -0.972 43.4-123.1-170.8 167.3 10.4 25.9 14.0 27 30 A V E +A 45 0A 7 -2,-0.3 2,-0.3 18,-0.2 18,-0.2 -0.986 41.7 159.5-119.2 137.9 13.6 27.2 15.5 28 31 A H E +A 44 0A 22 16,-2.0 16,-2.9 -2,-0.4 -2,-0.0 -0.894 39.0 49.9-148.4-176.8 16.0 29.1 13.2 29 32 A D E - 0 0 83 -2,-0.3 2,-0.4 14,-0.2 -1,-0.1 0.909 65.1-169.4 43.4 54.4 19.0 31.5 13.0 30 33 A L E - 0 0 20 13,-0.1 2,-0.4 -3,-0.1 13,-0.2 -0.565 7.4-179.9 -70.2 123.2 21.0 29.6 15.6 31 34 A K E +A 42 0A 117 11,-2.6 11,-2.6 -2,-0.4 2,-0.3 -0.991 5.1 176.6-131.6 123.6 24.0 31.7 16.6 32 35 A T E +A 41 0A 15 -2,-0.4 2,-0.3 9,-0.2 9,-0.2 -0.759 11.6 164.5-124.8 165.4 26.5 30.4 19.2 33 36 A R E -A 40 0A 95 7,-1.6 7,-3.2 -2,-0.3 2,-0.4 -0.939 24.2-131.4-170.0 162.1 29.8 31.3 20.9 34 37 A R E +A 39 0A 116 -32,-0.6 2,-0.3 -2,-0.3 5,-0.2 -0.962 17.1 176.9-122.5 137.5 31.9 30.3 23.9 35 38 A A E > -A 38 0A 49 3,-3.1 3,-1.5 -2,-0.4 -2,-0.0 -0.784 61.2 -64.5-138.7 98.6 33.5 32.6 26.6 36 39 A G T 3 S- 0 0 63 -2,-0.3 -1,-0.1 1,-0.3 0, 0.0 -0.444 121.4 -2.9 68.6-127.1 35.3 30.7 29.4 37 40 A P T 3 S+ 0 0 121 0, 0.0 2,-0.4 0, 0.0 -1,-0.3 0.448 126.4 82.0 -73.9 1.5 33.0 28.6 31.6 38 41 A R E < -A 35 0A 155 -3,-1.5 -3,-3.1 36,-0.0 2,-0.4 -0.863 54.2-171.2-115.1 138.4 30.0 30.0 29.5 39 42 A S E -Ab 34 74A 3 34,-2.4 36,-2.4 -2,-0.4 2,-0.4 -0.952 15.6-152.1-118.3 151.1 28.5 29.1 26.2 40 43 A F E -Ab 33 75A 59 -7,-3.2 -7,-1.6 -2,-0.4 2,-0.4 -0.955 11.8-176.7-123.7 140.6 25.8 31.3 24.5 41 44 A L E -Ab 32 76A 3 34,-2.1 36,-2.5 -2,-0.4 2,-0.4 -1.000 1.6-177.4-131.7 131.3 23.0 30.5 22.1 42 45 A E E +Ab 31 77A 90 -11,-2.6 -11,-2.6 -2,-0.4 2,-0.3 -0.996 17.6 156.0-122.1 141.4 20.6 32.9 20.4 43 46 A F E - b 0 78A 1 34,-1.7 36,-2.7 -2,-0.4 2,-0.5 -0.961 39.5-109.4-150.8 170.5 17.8 31.7 18.2 44 47 A H E -Ab 28 79A 34 -16,-2.9 -16,-2.0 -2,-0.3 2,-0.6 -0.903 21.4-157.5-105.5 129.7 14.4 32.5 16.8 45 48 A L E -Ab 27 80A 0 34,-2.5 36,-2.6 -2,-0.5 2,-0.6 -0.948 11.6-152.5-107.6 112.7 11.4 30.6 18.0 46 49 A V E +Ab 26 81A 0 -20,-2.5 -21,-3.0 -2,-0.6 -20,-1.0 -0.766 26.3 158.9 -91.7 119.0 8.6 30.8 15.4 47 50 A V - 0 0 10 34,-3.0 36,-0.3 -2,-0.6 2,-0.2 -0.758 50.6 -64.1-127.2 176.2 5.0 30.4 16.8 48 51 A R > - 0 0 137 -2,-0.2 3,-2.5 34,-0.2 -1,-0.0 -0.468 46.0-128.6 -63.7 130.5 1.5 31.3 15.7 49 52 A G T 3 S+ 0 0 57 1,-0.3 -1,-0.1 -2,-0.2 -2,-0.0 0.780 107.7 56.0 -52.4 -33.6 1.2 35.1 15.5 50 53 A D T 3 S+ 0 0 111 2,-0.1 -1,-0.3 3,-0.0 -2,-0.1 0.459 78.5 118.5 -82.2 -1.6 -1.9 35.1 17.7 51 54 A T S < S- 0 0 24 -3,-2.5 -4,-0.1 1,-0.1 2,-0.0 -0.500 72.4-118.1 -62.1 123.8 -0.0 33.4 20.5 52 55 A P >> - 0 0 72 0, 0.0 4,-2.5 0, 0.0 3,-0.6 -0.361 15.2-121.9 -64.7 148.2 0.0 35.7 23.5 53 56 A V H 3> S+ 0 0 127 1,-0.2 4,-2.9 2,-0.2 5,-0.2 0.902 113.5 57.7 -53.6 -44.9 3.4 36.8 24.6 54 57 A E H 3> S+ 0 0 133 1,-0.2 4,-1.1 2,-0.2 -1,-0.2 0.830 110.2 43.6 -56.7 -36.1 2.7 35.3 28.1 55 58 A E H <> S+ 0 0 108 -3,-0.6 4,-1.5 2,-0.2 3,-0.4 0.942 114.0 47.8 -75.0 -51.5 2.2 31.9 26.5 56 59 A A H X S+ 0 0 7 -4,-2.5 4,-1.5 1,-0.2 -2,-0.2 0.864 111.0 54.7 -54.3 -38.8 5.1 32.0 24.1 57 60 A H H X S+ 0 0 97 -4,-2.9 4,-2.5 -5,-0.2 -1,-0.2 0.814 99.0 59.2 -69.7 -33.9 7.3 33.2 27.1 58 61 A R H X S+ 0 0 145 -4,-1.1 4,-2.2 -3,-0.4 -1,-0.2 0.927 108.4 46.5 -57.4 -44.0 6.3 30.2 29.2 59 62 A L H X S+ 0 0 8 -4,-1.5 4,-2.7 2,-0.2 -2,-0.2 0.862 108.1 57.3 -65.2 -36.1 7.8 28.0 26.5 60 63 A C H X S+ 0 0 5 -4,-1.5 4,-2.5 2,-0.2 -2,-0.2 0.936 108.0 46.3 -59.7 -47.0 10.8 30.3 26.4 61 64 A D H X S+ 0 0 57 -4,-2.5 4,-2.2 2,-0.2 5,-0.2 0.922 111.8 51.0 -61.5 -46.5 11.4 29.6 30.1 62 65 A E H X S+ 0 0 60 -4,-2.2 4,-2.5 1,-0.2 -2,-0.2 0.924 113.3 45.9 -53.7 -48.5 11.0 25.8 29.6 63 66 A L H X S+ 0 0 3 -4,-2.7 4,-2.7 2,-0.2 5,-0.2 0.879 109.5 53.1 -65.1 -42.2 13.5 25.9 26.8 64 67 A E H X S+ 0 0 58 -4,-2.5 4,-2.1 2,-0.2 -1,-0.2 0.918 114.1 43.4 -59.1 -44.7 16.1 28.0 28.6 65 68 A R H X S+ 0 0 158 -4,-2.2 4,-1.9 2,-0.2 -2,-0.2 0.914 113.6 50.4 -66.9 -46.6 16.0 25.6 31.5 66 69 A A H X S+ 0 0 11 -4,-2.5 4,-2.3 -5,-0.2 -2,-0.2 0.911 113.6 46.1 -57.3 -44.1 16.0 22.5 29.3 67 70 A L H X S+ 0 0 0 -4,-2.7 4,-2.0 2,-0.2 7,-0.3 0.912 110.0 53.2 -65.5 -44.3 19.1 23.8 27.3 68 71 A A H < S+ 0 0 19 -4,-2.1 5,-0.3 -5,-0.2 6,-0.2 0.829 114.6 42.3 -61.5 -35.8 21.0 24.8 30.5 69 72 A Q H < S+ 0 0 162 -4,-1.9 -1,-0.2 1,-0.1 -2,-0.2 0.868 117.7 43.9 -77.9 -40.1 20.6 21.3 31.9 70 73 A A H < S+ 0 0 46 -4,-2.3 -2,-0.2 1,-0.3 -3,-0.2 0.679 122.8 37.4 -81.3 -19.4 21.3 19.4 28.7 71 74 A F S >< S- 0 0 24 -4,-2.0 3,-2.8 -5,-0.2 -1,-0.3 -0.727 88.2-143.4-133.8 81.8 24.3 21.6 27.7 72 75 A P T 3 S+ 0 0 113 0, 0.0 -3,-0.1 0, 0.0 3,-0.1 -0.182 87.1 19.6 -52.7 129.0 26.2 22.5 30.9 73 76 A G T 3 S+ 0 0 38 -5,-0.3 -34,-2.4 1,-0.3 2,-0.3 0.038 96.9 122.5 100.0 -24.0 27.5 26.1 30.6 74 77 A L E < -b 39 0A 1 -3,-2.8 2,-0.4 -7,-0.3 -1,-0.3 -0.534 36.8-176.5 -80.5 132.1 25.1 27.0 27.9 75 78 A Q E -b 40 0A 109 -36,-2.4 -34,-2.1 -2,-0.3 2,-0.4 -0.996 13.0-149.4-125.5 136.5 22.7 30.0 28.3 76 79 A A E -b 41 0A 7 -2,-0.4 2,-0.5 -36,-0.2 -34,-0.2 -0.832 12.9-162.1-110.9 139.5 20.1 30.8 25.6 77 80 A T E -b 42 0A 102 -36,-2.5 -34,-1.7 -2,-0.4 2,-0.5 -0.989 21.6-156.3-112.7 124.7 18.4 34.1 24.5 78 81 A I E -b 43 0A 25 -2,-0.5 2,-0.6 -36,-0.2 -34,-0.2 -0.898 11.3-162.0-113.9 126.9 15.2 33.5 22.5 79 82 A H E -b 44 0A 99 -36,-2.7 -34,-2.5 -2,-0.5 2,-0.3 -0.933 17.9-146.7-104.8 114.3 13.6 35.8 20.0 80 83 A V E -b 45 0A 50 -2,-0.6 -34,-0.2 -36,-0.2 -36,-0.0 -0.652 20.7-179.7 -87.0 137.1 10.0 34.9 19.4 81 84 A E E -b 46 0A 18 -36,-2.6 -34,-3.0 -2,-0.3 2,-0.1 -0.925 24.5-115.2-134.6 155.3 8.5 35.5 15.9 82 85 A P > - 0 0 67 0, 0.0 3,-2.3 0, 0.0 -34,-0.2 -0.359 46.7 -88.0 -84.4 171.4 5.2 35.0 14.1 83 86 A E G > S+ 0 0 43 -36,-0.3 3,-1.6 1,-0.3 -35,-0.1 0.673 119.2 70.0 -57.7 -24.2 4.6 32.6 11.1 84 87 A G G 3 S+ 0 0 75 1,-0.3 -1,-0.3 0, 0.0 -38,-0.0 0.666 92.9 60.3 -67.6 -15.6 5.6 35.1 8.4 85 88 A E G < S+ 0 0 104 -3,-2.3 -1,-0.3 2,-0.0 -2,-0.2 0.464 79.1 123.3 -89.5 -3.1 9.2 34.8 9.7 86 89 A R S < S- 0 0 108 -3,-1.6 -58,-0.0 -4,-0.2 -3,-0.0 -0.232 71.2 -91.5 -63.1 148.5 9.3 31.0 9.0 87 90 A K 0 0 141 1,-0.2 -1,-0.1 0, 0.0 -2,-0.0 -0.082 360.0 360.0 -55.0 157.8 12.1 29.7 6.7 88 91 A R 0 0 304 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 -0.361 360.0 360.0 69.3 360.0 11.5 29.3 2.9