==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 30-JUL-99 1C94 . COMPND 2 MOLECULE: RETRO-GCN4 LEUCINE ZIPPER; . SOURCE 2 SYNTHETIC: YES; . AUTHOR P.R.E.MITTL,C.A.DEILLON,D.SARGENT,N.LIU,S.KLAUSER, . 74 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6344.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 74.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 53 71.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A G 0 0 85 0, 0.0 39,-0.1 0, 0.0 40,-0.0 0.000 360.0 360.0 360.0 -8.7 15.7 4.7 -25.8 2 3 A G + 0 0 79 37,-0.1 2,-0.2 0, 0.0 0, 0.0 0.499 360.0 44.9-117.4 -15.8 19.0 6.2 -26.5 3 4 A R S S- 0 0 207 4,-0.0 2,-0.3 3,-0.0 3,-0.2 -0.470 80.9-113.9-117.2-170.2 19.4 8.2 -23.3 4 5 A E > + 0 0 118 -2,-0.2 4,-0.9 1,-0.1 0, 0.0 -0.763 44.9 149.9-144.1 102.9 18.8 7.5 -19.6 5 6 A G H > S+ 0 0 35 -2,-0.3 4,-2.1 2,-0.2 5,-0.2 0.617 90.1 68.5 -84.0 -18.7 16.3 9.0 -17.3 6 7 A V H > S+ 0 0 21 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.937 95.9 48.0 -63.3 -45.7 16.7 5.5 -15.9 7 8 A L H > S+ 0 0 86 1,-0.2 4,-2.0 2,-0.2 -1,-0.2 0.893 110.0 53.3 -61.7 -43.1 20.2 6.2 -14.8 8 9 A K H X S+ 0 0 152 -4,-0.9 4,-1.8 2,-0.2 -1,-0.2 0.883 109.9 46.8 -61.0 -42.7 19.1 9.4 -13.2 9 10 A K H X S+ 0 0 31 -4,-2.1 4,-2.5 1,-0.2 -2,-0.2 0.932 112.0 51.0 -63.5 -42.6 16.4 7.5 -11.3 10 11 A L H X S+ 0 0 76 -4,-3.0 4,-2.8 1,-0.2 -2,-0.2 0.856 107.3 54.3 -66.6 -28.0 18.9 4.8 -10.2 11 12 A R H X S+ 0 0 144 -4,-2.0 4,-2.6 2,-0.2 -1,-0.2 0.940 108.6 47.0 -74.4 -42.4 21.3 7.5 -9.0 12 13 A A H X S+ 0 0 36 -4,-1.8 4,-2.8 2,-0.2 5,-0.2 0.916 113.5 52.1 -59.4 -44.0 18.6 9.0 -6.7 13 14 A V H X S+ 0 0 14 -4,-2.5 4,-2.5 1,-0.2 -2,-0.2 0.940 110.7 45.1 -57.2 -53.7 17.9 5.4 -5.6 14 15 A E H X S+ 0 0 105 -4,-2.8 4,-2.3 2,-0.2 -2,-0.2 0.927 113.1 50.6 -61.6 -39.7 21.5 4.7 -4.7 15 16 A N H X S+ 0 0 95 -4,-2.6 4,-2.5 2,-0.2 -2,-0.2 0.936 110.5 50.3 -61.1 -45.1 21.9 8.1 -3.0 16 17 A E H X S+ 0 0 58 -4,-2.8 4,-1.9 1,-0.2 5,-0.2 0.931 109.5 51.5 -59.2 -37.6 18.7 7.4 -0.9 17 18 A L H X S+ 0 0 94 -4,-2.5 4,-2.6 1,-0.2 -1,-0.2 0.896 107.3 51.8 -67.6 -39.8 20.1 4.0 0.0 18 19 A H H X S+ 0 0 98 -4,-2.3 4,-2.3 1,-0.2 5,-0.3 0.927 107.2 54.1 -65.6 -31.5 23.4 5.5 1.2 19 20 A Y H X S+ 0 0 101 -4,-2.5 4,-2.3 1,-0.2 5,-0.2 0.945 110.5 46.0 -64.6 -39.6 21.3 8.0 3.4 20 21 A N H X S+ 0 0 12 -4,-1.9 4,-2.3 1,-0.2 -1,-0.2 0.903 108.6 58.0 -73.0 -36.1 19.6 5.0 5.0 21 22 A K H X S+ 0 0 103 -4,-2.6 4,-2.0 -5,-0.2 -1,-0.2 0.929 107.1 44.7 -56.4 -47.5 22.9 3.3 5.4 22 23 A S H X S+ 0 0 56 -4,-2.3 4,-2.3 1,-0.2 5,-0.2 0.872 114.5 50.5 -67.8 -39.7 24.4 6.2 7.5 23 24 A L H X S+ 0 0 7 -4,-2.3 4,-2.9 -5,-0.3 -1,-0.2 0.922 108.4 51.0 -65.1 -34.1 21.2 6.4 9.6 24 25 A L H X S+ 0 0 93 -4,-2.3 4,-2.8 2,-0.2 -2,-0.2 0.901 111.1 48.9 -67.4 -39.2 21.3 2.6 10.2 25 26 A E H X S+ 0 0 81 -4,-2.0 4,-2.4 -5,-0.2 -1,-0.2 0.843 108.6 52.7 -67.4 -35.2 24.9 3.0 11.4 26 27 A E H X S+ 0 0 65 -4,-2.3 4,-2.7 2,-0.2 -2,-0.2 0.923 111.5 47.9 -65.1 -41.3 23.9 5.9 13.6 27 28 A V H X S+ 0 0 14 -4,-2.9 4,-1.7 -5,-0.2 5,-0.2 0.966 113.5 45.9 -60.9 -57.9 21.2 3.5 15.1 28 29 A K H X S+ 0 0 79 -4,-2.8 4,-2.8 2,-0.2 -1,-0.2 0.902 113.5 49.4 -51.3 -42.6 23.6 0.8 15.6 29 30 A D H < S+ 0 0 89 -4,-2.4 4,-0.2 1,-0.2 -2,-0.2 0.901 111.8 50.0 -64.4 -43.0 26.2 3.2 17.1 30 31 A E H X S+ 0 0 23 -4,-2.7 4,-1.8 1,-0.2 -1,-0.2 0.805 113.0 46.7 -65.9 -25.8 23.5 4.5 19.4 31 32 A L H < S+ 0 0 81 -4,-1.7 -2,-0.2 2,-0.2 -1,-0.2 0.883 107.4 52.8 -80.5 -44.1 22.6 1.0 20.4 32 33 A Q T < S+ 0 0 81 -4,-2.8 -1,-0.2 -5,-0.2 3,-0.2 0.509 110.4 56.8 -72.0 4.3 26.1 -0.2 21.1 33 34 A K T 4 S+ 0 0 145 -4,-0.2 2,-2.7 -5,-0.1 -2,-0.2 0.872 100.5 48.3 -93.1 -69.0 26.2 2.8 23.2 34 35 A M S < S+ 0 0 89 -4,-1.8 2,-0.2 -5,-0.1 -1,-0.1 0.029 104.2 100.6 -68.1 40.4 23.3 2.3 25.6 35 36 A R S S- 0 0 138 -2,-2.7 -3,-0.1 -3,-0.2 -4,-0.0 -0.626 93.7 -60.8-120.2 174.8 24.7 -1.2 26.1 36 37 A Q 0 0 167 1,-0.2 -3,-0.0 -2,-0.2 -4,-0.0 0.659 360.0 360.0 -17.0 -66.9 26.9 -3.3 28.6 37 38 A L 0 0 175 -5,-0.1 -1,-0.2 0, 0.0 -5,-0.0 0.664 360.0 360.0-108.3 360.0 30.0 -1.1 28.3 38 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 39 2 B G 0 0 93 0, 0.0 -37,-0.1 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0 17.5 14.8 0.5 -26.0 40 3 B G - 0 0 85 -39,-0.1 2,-0.2 2,-0.0 0, 0.0 0.867 360.0 -52.6 -34.4-108.0 10.9 0.5 -26.0 41 4 B R S S- 0 0 228 -40,-0.0 2,-0.3 0, 0.0 3,-0.2 -0.278 71.0 -90.3-121.0-158.9 8.9 2.3 -23.3 42 5 B E > + 0 0 80 -2,-0.2 4,-0.8 1,-0.1 -2,-0.0 -0.763 53.6 149.6-145.7 104.4 9.6 1.7 -19.7 43 6 B G H > S+ 0 0 45 -2,-0.3 4,-2.0 2,-0.2 5,-0.2 0.630 89.7 68.9 -83.5 -21.2 8.0 -0.8 -17.3 44 7 B V H > S+ 0 0 76 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.893 95.1 48.0 -61.7 -42.6 11.5 -0.4 -15.9 45 8 B L H > S+ 0 0 49 2,-0.2 4,-2.5 1,-0.2 -1,-0.2 0.885 110.0 54.1 -65.9 -40.4 10.8 3.2 -14.8 46 9 B K H X S+ 0 0 151 -4,-0.8 4,-1.7 2,-0.2 -2,-0.2 0.915 110.3 45.8 -63.5 -36.8 7.7 2.0 -13.2 47 10 B K H X S+ 0 0 153 -4,-2.0 4,-2.5 1,-0.2 -2,-0.2 0.918 111.9 50.8 -73.0 -37.8 9.6 -0.6 -11.2 48 11 B L H X S+ 0 0 18 -4,-2.8 4,-2.7 1,-0.2 5,-0.2 0.898 107.0 55.4 -69.4 -31.3 12.3 1.9 -10.2 49 12 B R H X S+ 0 0 123 -4,-2.5 4,-2.9 2,-0.2 5,-0.2 0.956 108.3 47.5 -68.0 -41.4 9.5 4.3 -9.0 50 13 B A H X S+ 0 0 40 -4,-1.7 4,-2.8 1,-0.2 5,-0.2 0.939 112.1 52.1 -61.6 -40.6 8.1 1.6 -6.7 51 14 B V H X S+ 0 0 57 -4,-2.5 4,-2.3 1,-0.2 -1,-0.2 0.909 110.5 45.1 -63.3 -48.0 11.6 0.9 -5.6 52 15 B E H X S+ 0 0 40 -4,-2.7 4,-2.3 2,-0.2 -1,-0.2 0.913 113.1 50.9 -66.0 -37.3 12.3 4.5 -4.7 53 16 B N H X S+ 0 0 97 -4,-2.9 4,-2.2 -5,-0.2 -2,-0.2 0.937 111.2 49.3 -62.5 -44.1 8.9 4.9 -3.0 54 17 B E H X S+ 0 0 129 -4,-2.8 4,-1.9 1,-0.2 5,-0.2 0.917 109.5 51.6 -62.1 -35.7 9.7 1.7 -0.9 55 18 B L H X S+ 0 0 19 -4,-2.3 4,-2.3 -5,-0.2 -1,-0.2 0.897 107.7 51.6 -67.2 -41.9 13.1 3.0 0.0 56 19 B H H X S+ 0 0 95 -4,-2.3 4,-2.2 1,-0.2 5,-0.2 0.871 108.0 53.6 -63.1 -30.9 11.5 6.4 1.2 57 20 B Y H X S+ 0 0 152 -4,-2.2 4,-1.8 2,-0.2 -1,-0.2 0.928 109.7 46.3 -67.9 -43.4 9.1 4.3 3.4 58 21 B N H X S+ 0 0 87 -4,-1.9 4,-2.6 1,-0.2 5,-0.2 0.880 109.8 57.4 -66.0 -37.5 12.1 2.4 5.0 59 22 B K H X S+ 0 0 55 -4,-2.3 4,-2.0 -5,-0.2 -2,-0.2 0.934 106.4 45.2 -57.6 -43.9 13.7 5.8 5.4 60 23 B S H X S+ 0 0 56 -4,-2.2 4,-1.7 2,-0.2 -1,-0.2 0.872 114.9 50.4 -68.4 -35.6 10.7 7.3 7.5 61 24 B L H X S+ 0 0 63 -4,-1.8 4,-3.0 -5,-0.2 5,-0.2 0.935 108.8 50.0 -67.5 -42.4 10.6 4.1 9.6 62 25 B L H X S+ 0 0 24 -4,-2.6 4,-2.6 2,-0.2 -2,-0.2 0.864 111.0 49.9 -61.3 -41.6 14.4 4.2 10.2 63 26 B E H X S+ 0 0 43 -4,-2.0 4,-2.8 -5,-0.2 -1,-0.2 0.849 109.3 52.1 -64.5 -35.7 14.0 7.9 11.3 64 27 B E H X S+ 0 0 91 -4,-1.7 4,-2.6 2,-0.2 -2,-0.2 0.927 111.2 47.5 -64.4 -42.0 11.1 6.7 13.6 65 28 B V H X S+ 0 0 55 -4,-3.0 4,-2.2 1,-0.2 5,-0.2 0.954 113.6 47.3 -63.1 -53.6 13.5 4.1 15.1 66 29 B K H X S+ 0 0 17 -4,-2.6 4,-2.7 2,-0.2 -1,-0.2 0.921 112.1 48.8 -52.7 -46.4 16.2 6.6 15.5 67 30 B D H < S+ 0 0 91 -4,-2.8 4,-0.2 1,-0.2 -1,-0.2 0.898 111.9 51.0 -62.8 -40.2 13.8 9.1 17.1 68 31 B E H X S+ 0 0 97 -4,-2.6 4,-1.8 1,-0.2 3,-0.4 0.842 111.6 47.6 -68.7 -28.4 12.6 6.4 19.4 69 32 B L H < S+ 0 0 20 -4,-2.2 -2,-0.2 1,-0.2 -1,-0.2 0.900 107.7 51.3 -75.6 -45.4 16.0 5.5 20.4 70 33 B Q T < S+ 0 0 65 -4,-2.7 -1,-0.2 -5,-0.2 -2,-0.2 0.496 110.6 57.5 -71.3 4.7 17.3 9.0 21.1 71 34 B K T > S+ 0 0 131 -3,-0.4 2,-1.1 -4,-0.2 4,-1.0 0.883 102.3 46.6 -93.4 -65.1 14.2 9.2 23.2 72 35 B M T < S+ 0 0 87 -4,-1.8 -2,-0.1 1,-0.3 -1,-0.1 0.050 90.1 85.5 -71.5 30.8 14.7 6.2 25.6 73 36 B R T 4 S+ 0 0 142 -2,-1.1 -1,-0.3 -3,-0.1 -3,-0.1 -0.312 107.2 27.4-115.6 34.4 18.3 7.5 26.1 74 37 B Q T 4 0 0 161 -3,-0.1 -2,-0.2 0, 0.0 -3,-0.1 0.227 360.0 360.0-158.5 -51.8 16.5 9.6 28.7 75 38 B L < 0 0 196 -4,-1.0 -3,-0.2 0, 0.0 -2,-0.0 0.645 360.0 360.0-118.8 360.0 13.4 7.7 29.8