==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSFER 01-FEB-06 2CE0 . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; . AUTHOR M.J.MARCAIDA,B.G.SCHLARB-RIDLEY,J.A.R.WORRALL,J.WASTL, . 99 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6145.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 62 62.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 11.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 37.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A L 0 0 95 0, 0.0 2,-1.3 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0 161.8 16.6 39.4 -3.6 2 4 A D > - 0 0 93 1,-0.2 4,-2.6 2,-0.1 5,-0.2 -0.717 360.0-173.2 -82.8 94.1 18.3 42.2 -1.7 3 5 A I H > S+ 0 0 68 -2,-1.3 4,-2.8 1,-0.2 -1,-0.2 0.901 79.4 47.5 -56.5 -49.0 17.5 41.0 1.8 4 6 A Q H > S+ 0 0 67 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.886 114.1 46.0 -64.2 -42.3 18.8 44.1 3.6 5 7 A R H > S+ 0 0 110 2,-0.2 4,-2.3 1,-0.2 -1,-0.2 0.900 114.3 49.5 -66.5 -42.1 17.1 46.6 1.3 6 8 A G H X S+ 0 0 0 -4,-2.6 4,-2.8 2,-0.2 -2,-0.2 0.910 111.4 48.7 -60.5 -45.9 13.8 44.6 1.6 7 9 A A H X S+ 0 0 23 -4,-2.8 4,-2.7 2,-0.2 -2,-0.2 0.891 110.8 50.7 -62.2 -43.0 14.1 44.5 5.4 8 10 A T H X S+ 0 0 95 -4,-2.2 4,-1.5 2,-0.2 -2,-0.2 0.920 114.3 43.3 -62.2 -45.7 14.8 48.2 5.6 9 11 A L H X S+ 0 0 10 -4,-2.3 4,-2.5 2,-0.2 5,-0.3 0.915 116.1 47.9 -67.1 -43.6 11.7 49.0 3.4 10 12 A F H X>S+ 0 0 4 -4,-2.8 4,-2.4 1,-0.2 5,-2.1 0.904 106.9 56.1 -58.9 -46.7 9.5 46.5 5.2 11 13 A N H <5S+ 0 0 107 -4,-2.7 5,-0.3 3,-0.2 -1,-0.2 0.883 117.9 34.7 -61.6 -38.1 10.6 47.8 8.7 12 14 A R H <5S+ 0 0 179 -4,-1.5 -2,-0.2 -5,-0.1 -1,-0.2 0.794 128.6 32.5 -87.2 -29.3 9.4 51.5 7.7 13 15 A A H <5S+ 0 0 27 -4,-2.5 -3,-0.2 -5,-0.1 -2,-0.2 0.642 135.5 10.6-100.6 -16.8 6.4 50.7 5.5 14 16 A C T >X5S+ 0 0 24 -4,-2.4 4,-2.5 -5,-0.3 3,-1.1 0.640 97.6 85.2-133.5 -32.8 4.9 47.6 7.0 15 17 A A T 34< S- 0 0 25 -4,-2.5 3,-2.1 5,-0.2 -1,-0.2 -0.405 81.9-172.1-109.9 54.8 2.9 43.4 10.6 19 21 A D G > S- 0 0 80 -2,-0.4 3,-1.9 -3,-0.3 4,-0.1 -0.271 73.2 -19.2 -62.0 121.9 5.3 43.2 13.5 20 22 A T G 3 S- 0 0 83 1,-0.3 -1,-0.3 -2,-0.1 3,-0.1 0.827 134.4 -45.9 44.1 43.1 7.8 40.4 13.0 21 23 A G G < S+ 0 0 0 -3,-2.1 10,-2.9 1,-0.1 11,-0.4 0.455 118.3 110.3 89.2 2.8 5.4 38.8 10.5 22 24 A G < - 0 0 12 -3,-1.9 9,-0.3 8,-0.2 2,-0.2 0.272 66.2-120.9 -87.3-152.2 2.2 39.2 12.6 23 25 A N - 0 0 34 7,-0.2 -5,-0.2 -5,-0.1 6,-0.1 -0.717 15.5-172.2-158.3 105.3 -0.8 41.4 12.3 24 26 A I S S+ 0 0 99 -7,-2.8 -6,-0.1 -2,-0.2 -7,-0.1 0.611 88.2 41.5 -78.7 -9.2 -1.6 43.8 15.2 25 27 A I S S+ 0 0 78 -8,-0.3 -1,-0.2 1,-0.2 -7,-0.1 0.793 118.7 33.2-100.5 -45.1 -5.0 44.8 13.7 26 28 A Q S > S- 0 0 80 3,-0.1 3,-1.6 31,-0.0 -1,-0.2 -0.889 70.5-144.1-130.4 100.2 -6.5 41.6 12.4 27 29 A P T 3 S+ 0 0 119 0, 0.0 -3,-0.1 0, 0.0 -5,-0.0 -0.291 89.0 28.9 -54.6 143.3 -5.9 38.1 14.0 28 30 A G T 3 S+ 0 0 28 -5,-0.1 10,-0.1 1,-0.0 11,-0.0 0.362 101.7 85.6 86.2 -5.0 -5.7 35.3 11.4 29 31 A A < + 0 0 22 -3,-1.6 -3,-0.1 -6,-0.1 -4,-0.1 -0.258 59.1 135.9-123.3 45.8 -4.3 37.6 8.7 30 32 A T - 0 0 24 -7,-0.1 -8,-0.2 1,-0.1 -7,-0.2 -0.187 67.5-109.5 -81.1 179.4 -0.6 37.5 9.5 31 33 A L S S+ 0 0 21 -10,-2.9 2,-0.2 -9,-0.3 -9,-0.2 0.228 79.7 118.0 -96.1 13.7 2.3 37.1 7.1 32 34 A F S > S- 0 0 86 -11,-0.4 4,-2.6 1,-0.1 3,-0.5 -0.539 78.9-111.1 -76.9 149.7 3.0 33.6 8.4 33 35 A T H > S+ 0 0 42 60,-0.5 4,-2.8 1,-0.2 5,-0.2 0.860 113.8 53.7 -48.3 -47.7 2.7 30.7 5.8 34 36 A K H > S+ 0 0 156 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.902 113.0 42.5 -61.7 -42.0 -0.4 29.1 7.4 35 37 A D H > S+ 0 0 20 -3,-0.5 4,-1.7 2,-0.2 -1,-0.2 0.916 113.2 51.8 -70.2 -43.2 -2.4 32.4 7.4 36 38 A L H <>S+ 0 0 10 -4,-2.6 5,-3.0 1,-0.2 6,-0.4 0.936 112.7 47.7 -56.5 -44.0 -1.2 33.3 3.9 37 39 A E H ><5S+ 0 0 116 -4,-2.8 3,-1.6 -5,-0.2 -2,-0.2 0.925 110.2 50.1 -62.1 -48.1 -2.3 29.9 2.7 38 40 A R H 3<5S+ 0 0 143 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.783 112.8 48.4 -63.6 -27.0 -5.7 30.0 4.4 39 41 A N T 3<5S- 0 0 80 -4,-1.7 -1,-0.3 -5,-0.1 -2,-0.2 0.352 115.0-116.9 -94.1 1.7 -6.3 33.4 2.8 40 42 A G T < 5S+ 0 0 53 -3,-1.6 -3,-0.2 -4,-0.2 -2,-0.1 0.738 87.9 102.9 73.0 26.1 -5.2 32.2 -0.7 41 43 A V < + 0 0 29 -5,-3.0 2,-1.2 -6,-0.2 -4,-0.2 0.053 26.7 125.5-132.8 26.9 -2.2 34.5 -0.9 42 44 A D + 0 0 32 -6,-0.4 2,-0.3 -5,-0.1 -5,-0.1 -0.229 58.2 84.2 -85.3 47.1 0.9 32.5 -0.2 43 45 A T S > S- 0 0 51 -2,-1.2 4,-2.7 1,-0.1 5,-0.2 -0.981 85.0-117.2-140.6 155.5 2.7 33.5 -3.5 44 46 A E H > S+ 0 0 63 -2,-0.3 4,-2.6 1,-0.2 5,-0.2 0.897 115.6 53.1 -56.4 -42.1 4.8 36.5 -4.5 45 47 A E H > S+ 0 0 142 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.879 112.5 43.2 -65.5 -37.6 2.2 37.4 -7.1 46 48 A E H > S+ 0 0 53 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.869 112.6 51.9 -74.9 -39.3 -0.6 37.4 -4.6 47 49 A I H X S+ 0 0 7 -4,-2.7 4,-2.2 2,-0.2 -2,-0.2 0.922 110.7 50.2 -61.1 -43.2 1.4 39.2 -1.9 48 50 A Y H X S+ 0 0 51 -4,-2.6 4,-2.5 -5,-0.2 -2,-0.2 0.939 110.0 50.7 -58.2 -46.9 2.2 41.9 -4.6 49 51 A R H X S+ 0 0 130 -4,-1.9 4,-2.7 1,-0.2 5,-0.4 0.907 111.3 45.2 -63.2 -45.1 -1.5 42.2 -5.5 50 52 A V H X S+ 0 0 36 -4,-2.4 4,-2.1 1,-0.2 -1,-0.2 0.892 114.4 49.7 -68.5 -34.0 -2.7 42.7 -1.9 51 53 A T H < S+ 0 0 17 -4,-2.2 10,-2.1 -5,-0.2 11,-0.3 0.891 115.3 45.1 -66.4 -37.9 0.1 45.2 -1.2 52 54 A Y H < S+ 0 0 17 -4,-2.5 10,-2.2 8,-0.3 -2,-0.2 0.937 129.6 19.7 -70.9 -49.7 -0.7 47.1 -4.4 53 55 A F H < S- 0 0 88 -4,-2.7 7,-0.5 7,-0.2 -3,-0.2 0.624 97.8-140.5-101.3 -17.7 -4.5 47.3 -4.1 54 56 A G < - 0 0 17 -4,-2.1 2,-0.3 -5,-0.4 -1,-0.2 -0.084 4.2-127.7 80.5 175.1 -5.1 46.7 -0.4 55 57 A K B > -A 58 0A 151 3,-2.1 3,-2.4 1,-0.1 -1,-0.1 -0.804 56.4 -44.7-167.4 124.8 -7.9 44.6 1.3 56 58 A G T 3 S+ 0 0 79 1,-0.3 -1,-0.1 -2,-0.3 0, 0.0 -0.273 130.0 1.3 52.3-122.4 -10.3 45.7 4.0 57 59 A R T 3 S+ 0 0 174 -3,-0.1 -1,-0.3 2,-0.1 -3,-0.0 0.579 116.1 90.8 -75.8 -9.1 -8.4 47.5 6.8 58 60 A M B < S-A 55 0A 50 -3,-2.4 -3,-2.1 14,-0.0 2,-0.1 -0.789 73.4-140.3 -88.0 121.9 -5.2 47.3 4.9 59 61 A P - 0 0 50 0, 0.0 -5,-0.3 0, 0.0 12,-0.3 -0.347 16.6-121.8 -69.2 151.4 -4.5 50.2 2.6 60 62 A G B -b 71 0B 0 10,-2.0 12,-2.9 -7,-0.5 -8,-0.3 -0.631 13.7-159.5-101.7 163.5 -2.9 49.5 -0.7 61 63 A F + 0 0 32 -10,-2.1 16,-2.8 -2,-0.2 -9,-0.2 0.425 45.7 122.4-126.3 -11.0 0.3 51.1 -1.7 62 64 A G B > -c 77 0C 0 -10,-2.2 3,-1.6 -11,-0.3 16,-0.1 -0.267 66.6-124.6 -68.4 148.5 0.3 51.0 -5.6 63 65 A E T 3 S+ 0 0 82 14,-0.5 -1,-0.1 1,-0.3 15,-0.1 0.873 114.7 39.9 -57.4 -38.5 0.6 54.1 -7.7 64 66 A K T 3 S+ 0 0 166 2,-0.1 -1,-0.3 3,-0.0 2,-0.1 0.155 82.1 137.2-100.8 16.3 -2.6 53.1 -9.5 65 67 A a < - 0 0 6 -3,-1.6 6,-0.1 -13,-0.1 -12,-0.1 -0.441 47.8-131.7 -59.3 134.6 -4.4 51.9 -6.4 66 68 A T + 0 0 98 1,-0.1 2,-0.1 -2,-0.1 -2,-0.1 -0.982 66.9 31.1-154.8 147.5 -8.0 53.3 -6.6 67 69 A P S > S- 0 0 78 0, 0.0 3,-2.3 0, 0.0 4,-0.4 0.687 75.1-127.0 -75.8 166.7 -10.2 54.7 -5.2 68 70 A R G > S+ 0 0 165 1,-0.3 3,-1.5 2,-0.2 -2,-0.0 0.789 104.7 65.3 -45.8 -38.9 -8.2 57.0 -2.9 69 71 A G G 3 S+ 0 0 66 1,-0.3 -1,-0.3 -10,-0.0 4,-0.1 0.710 101.0 47.9 -61.2 -25.2 -10.2 55.7 0.2 70 72 A Q G < S+ 0 0 86 -3,-2.3 -10,-2.0 2,-0.1 2,-0.3 0.437 105.2 75.7 -96.4 3.0 -8.8 52.2 -0.1 71 73 A a B < S-b 60 0B 3 -3,-1.5 -10,-0.2 -4,-0.4 -18,-0.1 -0.754 93.9 -83.0-116.1 154.4 -5.2 53.3 -0.5 72 74 A T - 0 0 24 -12,-2.9 -1,-0.1 -2,-0.3 -2,-0.1 -0.165 26.3-145.3 -43.8 141.8 -2.5 54.7 1.8 73 75 A F S S+ 0 0 141 -4,-0.1 -1,-0.1 2,-0.1 3,-0.1 0.449 83.9 73.9 -91.9 -4.6 -2.8 58.4 2.5 74 76 A G S S- 0 0 39 1,-0.2 2,-0.1 0, 0.0 -3,-0.0 -0.178 108.5 -49.3 -84.9-168.4 1.0 58.6 2.6 75 77 A P - 0 0 119 0, 0.0 -1,-0.2 0, 0.0 2,-0.1 -0.365 59.4-118.6 -66.1 142.8 3.2 58.3 -0.4 76 78 A R - 0 0 59 -3,-0.1 2,-0.3 -13,-0.1 -14,-0.2 -0.416 27.2-119.5 -71.4 156.1 2.5 55.4 -2.8 77 79 A L B -c 62 0C 12 -16,-2.8 -14,-0.5 -2,-0.1 2,-0.1 -0.747 25.3-112.6 -95.6 146.0 5.3 52.9 -3.4 78 80 A Q >> - 0 0 113 -2,-0.3 4,-2.3 -16,-0.1 3,-0.5 -0.396 29.8-108.9 -70.8 154.9 6.8 52.3 -6.8 79 81 A D H 3> S+ 0 0 84 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.891 120.9 53.3 -48.9 -45.2 6.2 49.0 -8.6 80 82 A E H 3> S+ 0 0 142 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.842 108.1 50.1 -64.0 -36.1 9.9 48.0 -8.0 81 83 A E H <> S+ 0 0 40 -3,-0.5 4,-2.4 2,-0.2 -1,-0.2 0.906 110.8 48.4 -67.5 -42.9 9.5 48.7 -4.2 82 84 A I H X S+ 0 0 0 -4,-2.3 4,-2.7 2,-0.2 -2,-0.2 0.893 110.5 52.4 -65.7 -38.1 6.3 46.6 -4.0 83 85 A K H X S+ 0 0 111 -4,-2.5 4,-2.5 -5,-0.2 5,-0.2 0.937 109.4 49.0 -60.6 -47.4 8.1 43.8 -5.9 84 86 A L H X S+ 0 0 8 -4,-2.1 4,-2.4 1,-0.2 -2,-0.2 0.917 112.9 48.0 -57.0 -45.8 11.0 43.9 -3.4 85 87 A L H X S+ 0 0 2 -4,-2.4 4,-2.8 2,-0.2 5,-0.2 0.903 110.4 50.6 -62.6 -43.7 8.5 43.8 -0.5 86 88 A A H X S+ 0 0 0 -4,-2.7 4,-2.3 2,-0.2 -2,-0.2 0.915 112.6 46.6 -62.3 -42.3 6.6 40.9 -2.0 87 89 A E H X S+ 0 0 64 -4,-2.5 4,-2.4 2,-0.2 -2,-0.2 0.902 113.3 50.0 -64.4 -42.0 9.8 38.9 -2.5 88 90 A F H X S+ 0 0 9 -4,-2.4 4,-2.9 -5,-0.2 -2,-0.2 0.926 111.5 47.3 -61.1 -48.0 10.9 39.8 1.0 89 91 A V H X S+ 0 0 10 -4,-2.8 4,-2.9 2,-0.2 5,-0.2 0.921 112.9 48.5 -62.7 -45.1 7.6 38.7 2.6 90 92 A K H X S+ 0 0 53 -4,-2.3 4,-2.4 -5,-0.2 -1,-0.2 0.927 113.5 47.8 -61.1 -44.0 7.5 35.4 0.7 91 93 A F H X S+ 0 0 75 -4,-2.4 4,-1.7 2,-0.2 -2,-0.2 0.940 114.0 46.0 -60.2 -49.9 11.1 34.7 1.7 92 94 A Q H X>S+ 0 0 30 -4,-2.9 5,-2.9 2,-0.2 4,-0.6 0.904 111.8 50.9 -62.3 -42.9 10.5 35.5 5.4 93 95 A A H ><5S+ 0 0 3 -4,-2.9 3,-1.1 1,-0.2 -60,-0.5 0.927 109.4 51.4 -61.7 -44.3 7.3 33.5 5.5 94 96 A D H 3<5S+ 0 0 87 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.844 112.6 46.4 -58.2 -35.7 9.2 30.5 4.0 95 97 A Q H 3<5S- 0 0 119 -4,-1.7 -1,-0.3 -5,-0.1 -2,-0.2 0.481 117.9-113.1 -85.8 -6.2 11.9 30.9 6.7 96 98 A G T <<5 - 0 0 41 -3,-1.1 -3,-0.2 -4,-0.6 -2,-0.1 0.739 58.0 -73.9 79.1 25.6 9.3 31.2 9.5 97 99 A W < - 0 0 13 -5,-2.9 -1,-0.1 -6,-0.1 -4,-0.1 0.962 64.6-144.2 53.7 62.4 10.1 34.9 10.3 98 100 A P 0 0 75 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 -0.230 360.0 360.0 -57.4 141.8 13.4 34.3 12.1 99 101 A T 0 0 176 -79,-0.0 -2,-0.0 0, 0.0 0, 0.0 -0.957 360.0 360.0-110.5 360.0 14.3 36.5 15.0