==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER MEMBRANE PROTEIN 20-MAY-05 2CQQ . COMPND 2 MOLECULE: DNAJ HOMOLOG SUBFAMILY C MEMBER 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR Y.DOI-KATAYAMA,H.HIROTA,F.HAYASHI,S.YOKOYAMA,RIKEN . 72 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5923.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 43 59.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 15.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 37.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 116 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 116.2 24.7 -17.6 8.1 2 2 A S + 0 0 140 2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.936 360.0 84.4 -50.4 -54.0 26.5 -15.6 10.8 3 3 A S - 0 0 113 1,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.185 65.8-171.6 -52.6 140.3 27.2 -12.7 8.5 4 4 A G - 0 0 81 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.947 12.0-162.1-138.0 158.6 24.3 -10.3 8.2 5 5 A S - 0 0 118 -2,-0.3 0, 0.0 1,-0.2 0, 0.0 -0.838 38.6 -67.3-133.8 170.8 23.3 -7.2 6.2 6 6 A S - 0 0 119 -2,-0.3 -1,-0.2 1,-0.1 0, 0.0 0.101 49.0-126.7 -49.4 170.3 20.9 -4.3 6.4 7 7 A G - 0 0 72 1,-0.2 -1,-0.1 0, 0.0 0, 0.0 0.489 55.3 -29.4 -93.1-124.7 17.2 -5.0 6.1 8 8 A A - 0 0 63 1,-0.1 -1,-0.2 36,-0.0 35,-0.1 -0.777 62.6-115.6-102.2 144.1 14.7 -3.4 3.7 9 9 A P - 0 0 97 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.173 35.8 -96.4 -69.8 166.1 15.0 0.1 2.3 10 10 A E - 0 0 152 1,-0.1 2,-0.4 0, 0.0 5,-0.1 -0.038 46.6 -85.2 -73.6-177.8 12.5 3.0 3.0 11 11 A W - 0 0 34 4,-0.1 2,-0.3 3,-0.0 -1,-0.1 -0.786 43.5-169.7 -96.7 134.2 9.6 4.0 0.8 12 12 A T >> - 0 0 62 -2,-0.4 4,-3.0 1,-0.1 3,-1.4 -0.913 42.2-100.8-123.7 150.4 10.2 6.4 -2.1 13 13 A E H 3> S+ 0 0 170 -2,-0.3 4,-2.1 1,-0.3 5,-0.2 0.790 126.4 55.7 -32.9 -38.2 7.8 8.2 -4.4 14 14 A E H 3> S+ 0 0 106 2,-0.2 4,-1.9 1,-0.2 -1,-0.3 0.944 113.5 36.6 -64.2 -49.6 8.6 5.5 -6.9 15 15 A D H <> S+ 0 0 15 -3,-1.4 4,-1.4 1,-0.2 -2,-0.2 0.793 120.0 50.0 -73.4 -29.0 7.6 2.6 -4.5 16 16 A L H X S+ 0 0 63 -4,-3.0 4,-0.6 2,-0.2 -2,-0.2 0.763 114.3 44.4 -79.8 -26.8 4.7 4.7 -3.2 17 17 A S H X S+ 0 0 79 -4,-2.1 4,-0.6 -5,-0.5 -2,-0.2 0.793 112.0 51.9 -86.1 -31.9 3.5 5.5 -6.7 18 18 A Q H >X S+ 0 0 78 -4,-1.9 4,-2.1 -5,-0.2 3,-1.2 0.886 97.2 67.3 -71.5 -40.3 3.9 2.0 -8.0 19 19 A L H 3X S+ 0 0 0 -4,-1.4 4,-3.3 1,-0.3 5,-0.3 0.909 95.9 55.4 -45.1 -52.1 1.9 0.5 -5.1 20 20 A T H 3X S+ 0 0 89 -4,-0.6 4,-0.8 1,-0.2 -1,-0.3 0.846 108.4 49.8 -51.6 -36.5 -1.3 2.1 -6.4 21 21 A R H X S+ 0 0 9 -4,-2.1 4,-2.3 1,-0.2 3,-0.5 0.932 103.0 64.1 -65.0 -47.3 -0.1 -3.0 -8.1 23 23 A M H 3< S+ 0 0 43 -4,-3.3 -1,-0.2 1,-0.3 -2,-0.2 0.824 103.9 50.6 -45.5 -35.3 -3.1 -2.7 -5.8 24 24 A V H 3< S+ 0 0 115 -4,-0.8 -1,-0.3 -3,-0.4 -2,-0.2 0.897 108.5 49.3 -71.7 -42.0 -5.2 -2.6 -9.0 25 25 A K H << S+ 0 0 146 -4,-1.2 -2,-0.2 -3,-0.5 -1,-0.2 0.768 123.9 33.5 -68.3 -25.6 -3.6 -5.7 -10.5 26 26 A F S < S+ 0 0 16 -4,-2.3 -1,-0.3 4,-0.0 3,-0.1 -0.708 81.8 176.8-134.9 83.0 -4.3 -7.5 -7.2 27 27 A P > - 0 0 65 0, 0.0 3,-0.7 0, 0.0 2,-0.1 0.155 43.9 -57.1 -69.7-167.9 -7.5 -6.3 -5.4 28 28 A G T 3 S+ 0 0 55 1,-0.2 0, 0.0 5,-0.1 0, 0.0 -0.450 120.3 24.1 -77.4 149.6 -9.0 -7.6 -2.2 29 29 A G T 3 S+ 0 0 87 1,-0.3 -1,-0.2 -2,-0.1 3,-0.0 0.168 88.3 135.2 85.2 -20.1 -9.8 -11.2 -1.8 30 30 A T X - 0 0 43 -3,-0.7 3,-1.6 1,-0.1 2,-0.5 -0.372 65.6-106.9 -65.3 137.8 -7.3 -12.1 -4.5 31 31 A P T 3 S+ 0 0 111 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 -0.529 103.1 5.0 -69.8 114.5 -5.1 -15.1 -3.7 32 32 A G T 3> S+ 0 0 25 -2,-0.5 4,-2.7 3,-0.1 5,-0.3 0.737 81.9 155.8 84.2 24.1 -1.6 -13.9 -2.9 33 33 A R H X> S+ 0 0 54 -3,-1.6 4,-2.8 1,-0.2 3,-1.2 0.950 78.6 32.2 -44.5 -73.3 -2.5 -10.2 -3.1 34 34 A W H 3> S+ 0 0 54 1,-0.3 4,-2.1 2,-0.2 -1,-0.2 0.822 117.6 59.5 -56.2 -32.0 0.3 -8.9 -0.9 35 35 A E H 3> S+ 0 0 145 2,-0.2 4,-1.1 1,-0.2 -1,-0.3 0.819 111.8 39.4 -66.9 -31.1 2.4 -11.7 -2.2 36 36 A K H S+ 0 0 5 -4,-2.1 4,-2.9 -5,-0.3 5,-1.6 0.939 107.1 50.8 -66.0 -48.6 5.4 -7.3 -3.1 39 39 A H H <5S+ 0 0 153 -4,-1.1 -1,-0.2 -5,-0.2 -2,-0.2 0.772 116.3 44.8 -60.7 -25.7 7.1 -9.2 -5.9 40 40 A E H <5S+ 0 0 101 -4,-1.4 -2,-0.2 1,-0.1 -1,-0.2 0.921 117.1 40.5 -83.6 -50.6 6.1 -6.3 -8.2 41 41 A L H <5S- 0 0 13 -4,-3.0 -2,-0.2 -5,-0.2 -3,-0.2 0.776 111.3-119.7 -69.3 -26.4 7.1 -3.4 -5.9 42 42 A G T <5S+ 0 0 65 -4,-2.9 2,-0.2 1,-0.3 -3,-0.2 0.712 75.2 105.7 92.9 23.8 10.3 -5.3 -4.9 43 43 A R S > - 0 0 75 -2,-0.2 4,-2.0 1,-0.1 3,-0.5 -0.703 38.5-114.6 -93.3 142.4 8.3 -8.0 1.4 45 45 A V H >> S+ 0 0 58 -2,-0.3 4,-2.0 1,-0.3 3,-1.6 0.884 119.1 42.2 -33.9 -72.0 4.7 -8.8 1.9 46 46 A T H 3> S+ 0 0 91 1,-0.3 4,-2.5 2,-0.2 -1,-0.3 0.848 110.0 60.7 -47.3 -38.5 4.5 -7.4 5.4 47 47 A D H <4 S+ 0 0 38 -3,-0.5 4,-0.4 2,-0.2 -1,-0.3 0.869 113.1 36.5 -58.4 -38.3 6.6 -4.5 4.1 48 48 A V H XX S+ 0 0 0 -4,-2.0 4,-2.8 -3,-1.6 3,-2.1 0.978 119.3 43.5 -78.1 -66.3 3.8 -3.6 1.6 49 49 A T H 3X S+ 0 0 37 -4,-2.0 4,-3.1 1,-0.3 5,-0.2 0.877 111.6 57.2 -46.7 -44.0 0.7 -4.4 3.6 50 50 A T H 3< S+ 0 0 64 -4,-2.5 4,-0.4 -5,-0.4 -1,-0.3 0.787 113.4 40.9 -59.8 -27.5 2.2 -2.7 6.6 51 51 A K H X> S+ 0 0 38 -3,-2.1 4,-0.9 -4,-0.4 3,-0.6 0.901 115.3 47.4 -86.4 -48.1 2.6 0.4 4.4 52 52 A A H >X S+ 0 0 0 -4,-2.8 4,-2.2 1,-0.2 3,-1.1 0.910 103.0 63.9 -59.8 -44.3 -0.7 0.3 2.6 53 53 A K H 3X S+ 0 0 93 -4,-3.1 4,-1.7 -5,-0.3 -1,-0.2 0.852 100.1 54.1 -48.3 -38.4 -2.6 -0.3 5.9 54 54 A Q H <> S+ 0 0 105 -3,-0.6 4,-2.0 -4,-0.4 -1,-0.3 0.847 107.8 49.5 -66.3 -34.6 -1.4 3.2 7.0 55 55 A L H << S+ 0 0 83 -3,-1.1 -2,-0.2 -4,-0.9 -1,-0.2 0.866 111.1 48.4 -72.3 -37.4 -2.9 4.7 3.8 56 56 A K H < S+ 0 0 100 -4,-2.2 3,-0.2 1,-0.2 -2,-0.2 0.787 111.4 52.1 -72.9 -28.1 -6.2 3.0 4.3 57 57 A D H < S+ 0 0 115 -4,-1.7 2,-1.3 -5,-0.3 -2,-0.2 0.950 107.7 50.3 -72.6 -51.7 -6.3 4.1 7.9 58 58 A S S < S+ 0 0 106 -4,-2.0 2,-0.3 -5,-0.1 -1,-0.2 -0.690 85.0 129.4 -92.6 86.3 -5.6 7.8 7.2 59 59 A V - 0 0 84 -2,-1.3 2,-0.6 -3,-0.2 -3,-0.1 -0.802 57.4-118.0-131.3 173.0 -8.2 8.7 4.6 60 60 A T + 0 0 146 -2,-0.3 2,-0.3 3,-0.0 -2,-0.1 -0.883 55.4 123.8-119.7 100.3 -10.9 11.3 3.8 61 61 A C - 0 0 104 -2,-0.6 -2,-0.1 1,-0.1 0, 0.0 -0.973 66.0 -59.6-150.6 161.9 -14.4 9.9 3.6 62 62 A S - 0 0 88 -2,-0.3 3,-0.4 1,-0.2 -1,-0.1 -0.007 44.6-126.9 -42.0 142.9 -17.9 10.3 5.1 63 63 A P S S+ 0 0 147 0, 0.0 -1,-0.2 0, 0.0 2,-0.0 0.654 97.7 1.2 -69.8 -15.6 -18.0 9.6 8.8 64 64 A G - 0 0 46 2,-0.1 2,-1.5 0, 0.0 -2,-0.0 -0.313 68.8-146.6-175.1 82.2 -20.8 7.1 8.2 65 65 A M + 0 0 175 -3,-0.4 2,-0.3 2,-0.0 -3,-0.0 -0.328 40.6 165.3 -56.8 88.0 -22.1 6.3 4.8 66 66 A V - 0 0 110 -2,-1.5 -2,-0.1 1,-0.1 -1,-0.0 -0.773 39.9-147.8-110.0 155.3 -25.7 5.7 5.8 67 67 A S S S- 0 0 136 1,-0.3 -1,-0.1 -2,-0.3 3,-0.1 0.897 76.0 -21.9 -85.4 -46.6 -28.9 5.5 3.7 68 68 A G - 0 0 39 1,-0.1 -1,-0.3 0, 0.0 3,-0.2 -0.958 43.0-131.9-167.0 147.0 -31.3 6.9 6.2 69 69 A P S S+ 0 0 142 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.811 99.2 8.2 -69.8 -31.2 -31.9 7.5 10.0 70 70 A S - 0 0 93 1,-0.1 0, 0.0 -3,-0.1 0, 0.0 -0.933 53.8-167.2-156.4 128.1 -35.4 6.0 9.8 71 71 A S 0 0 136 -2,-0.3 -1,-0.1 1,-0.2 0, 0.0 0.962 360.0 360.0 -78.3 -57.7 -37.3 4.2 7.1 72 72 A G 0 0 113 0, 0.0 -1,-0.2 0, 0.0 0, 0.0 -0.630 360.0 360.0 -92.0 360.0 -40.8 4.3 8.6