==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT PROTEIN (CYTOCHROME) 09-MAY-95 1CYJ . COMPND 2 MOLECULE: CYTOCHROME C6; . SOURCE 2 ORGANISM_SCIENTIFIC: CHLAMYDOMONAS REINHARDTII; . AUTHOR C.A.KERFELD,T.O.YEATES . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5391.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 65.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 39 43.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 94 0, 0.0 2,-1.2 0, 0.0 3,-0.1 0.000 360.0 360.0 360.0-153.6 -27.6 -21.5 54.9 2 2 A D > + 0 0 85 1,-0.2 4,-1.1 68,-0.1 76,-0.1 -0.551 360.0 172.3 -75.2 98.5 -30.9 -19.7 55.4 3 3 A L H > S+ 0 0 65 -2,-1.2 4,-1.5 2,-0.2 -1,-0.2 0.751 75.7 58.5 -78.2 -26.3 -32.7 -20.2 52.1 4 4 A A H > S+ 0 0 78 2,-0.2 4,-1.7 1,-0.2 -1,-0.2 0.894 109.2 45.2 -68.3 -42.0 -36.0 -18.7 53.3 5 5 A L H > S+ 0 0 23 1,-0.2 4,-2.6 2,-0.2 -1,-0.2 0.818 108.1 59.8 -67.3 -35.6 -34.2 -15.4 54.0 6 6 A G H X S+ 0 0 0 -4,-1.1 4,-2.7 68,-0.2 -1,-0.2 0.873 105.9 45.8 -58.8 -42.6 -32.4 -15.7 50.6 7 7 A A H X S+ 0 0 24 -4,-1.5 4,-3.5 2,-0.2 5,-0.2 0.890 111.6 52.4 -68.4 -42.3 -35.8 -15.7 48.7 8 8 A Q H X S+ 0 0 133 -4,-1.7 4,-1.9 1,-0.2 -2,-0.2 0.928 114.6 42.5 -59.4 -47.8 -37.0 -12.8 50.8 9 9 A V H X>S+ 0 0 3 -4,-2.6 4,-1.3 2,-0.2 5,-0.7 0.892 117.1 46.2 -65.9 -44.1 -33.8 -10.9 50.0 10 10 A F H X>S+ 0 0 7 -4,-2.7 5,-1.5 1,-0.2 4,-1.0 0.938 114.6 48.6 -64.5 -44.8 -33.8 -11.9 46.3 11 11 A N H <5S+ 0 0 107 -4,-3.5 -2,-0.2 1,-0.2 -1,-0.2 0.841 116.6 40.9 -64.0 -33.9 -37.5 -11.1 46.0 12 12 A G H <5S+ 0 0 62 -4,-1.9 -1,-0.2 -5,-0.2 -2,-0.2 0.583 132.6 14.3 -93.4 -10.5 -37.2 -7.7 47.6 13 13 A N H <5S+ 0 0 45 -4,-1.3 3,-0.4 -3,-0.3 -3,-0.2 0.629 126.1 41.4-129.2 -43.0 -34.0 -6.4 46.0 14 14 A C T >X< + 0 0 32 -4,-2.5 3,-2.8 5,-0.2 -3,-0.2 -0.119 67.6 164.4-114.7 33.5 -33.5 -10.6 37.6 19 19 A M G >< S+ 0 0 132 -4,-0.6 3,-1.6 1,-0.3 71,-0.1 -0.332 80.3 2.1 -51.8 127.5 -37.2 -11.4 37.6 20 20 A G G 3 S- 0 0 14 1,-0.3 -1,-0.3 69,-0.1 70,-0.2 0.696 130.9 -66.6 62.7 22.8 -37.3 -15.2 36.9 21 21 A G G < S+ 0 0 0 -3,-2.8 10,-3.5 1,-0.2 -1,-0.3 0.637 108.2 126.7 73.9 12.3 -33.5 -15.4 36.9 22 22 A R < - 0 0 62 -3,-1.6 2,-0.2 8,-0.2 -1,-0.2 0.021 59.1-127.9 -84.6-169.0 -33.6 -13.3 33.7 23 23 A N - 0 0 26 4,-0.1 -5,-0.2 7,-0.1 6,-0.1 -0.748 19.2-178.2-151.5 101.5 -31.7 -10.1 33.1 24 24 A S S S+ 0 0 87 -7,-2.0 -6,-0.1 -2,-0.2 -1,-0.1 0.718 86.3 46.3 -73.2 -20.6 -33.6 -7.0 31.9 25 25 A V S S+ 0 0 79 -8,-0.3 -1,-0.2 1,-0.3 -7,-0.0 0.913 131.7 16.1 -87.5 -43.8 -30.5 -4.7 31.6 26 26 A M S > S- 0 0 87 3,-0.2 3,-1.6 1,-0.1 -1,-0.3 -0.777 72.8-159.9-133.1 87.6 -28.3 -7.2 29.8 27 27 A P T 3 S+ 0 0 99 0, 0.0 -4,-0.1 0, 0.0 -1,-0.1 0.689 87.1 53.2 -36.4 -41.0 -30.4 -10.2 28.4 28 28 A E T 3 S+ 0 0 126 1,-0.2 2,-1.9 -6,-0.1 11,-0.1 0.819 90.8 73.7 -72.8 -33.6 -27.4 -12.6 28.1 29 29 A K S < S+ 0 0 87 -3,-1.6 -1,-0.2 -6,-0.1 -3,-0.2 -0.519 71.4 157.1 -80.6 70.4 -26.2 -12.3 31.6 30 30 A T - 0 0 23 -2,-1.9 -8,-0.2 -3,-0.1 9,-0.1 -0.384 55.4-107.4 -89.2 174.3 -29.0 -14.4 33.2 31 31 A L S S+ 0 0 13 -10,-3.5 2,-0.2 -9,-0.1 -9,-0.1 0.177 76.5 122.1 -91.7 20.7 -29.0 -16.4 36.4 32 32 A D S > S- 0 0 50 -11,-0.3 4,-2.8 1,-0.1 3,-0.3 -0.501 76.0-112.7 -79.6 153.7 -28.9 -19.8 34.8 33 33 A K H > S+ 0 0 94 50,-0.4 4,-2.5 1,-0.2 5,-0.1 0.848 117.2 46.8 -51.3 -43.4 -26.0 -22.1 35.6 34 34 A A H > S+ 0 0 54 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.792 110.8 49.9 -74.0 -32.6 -24.6 -21.8 32.1 35 35 A A H > S+ 0 0 11 -3,-0.3 4,-4.1 2,-0.2 5,-0.5 0.948 113.7 48.8 -66.7 -49.2 -24.8 -18.0 31.9 36 36 A L H X S+ 0 0 17 -4,-2.8 4,-1.6 1,-0.2 -2,-0.2 0.896 110.5 48.6 -55.6 -48.6 -23.1 -18.0 35.3 37 37 A E H < S+ 0 0 95 -4,-2.5 -1,-0.2 -5,-0.2 -2,-0.2 0.906 120.7 39.0 -60.7 -39.1 -20.4 -20.4 34.1 38 38 A Q H < S+ 0 0 137 -4,-1.8 -2,-0.2 -5,-0.1 -3,-0.2 0.937 130.8 19.2 -78.1 -45.7 -19.9 -18.2 31.0 39 39 A Y H < S+ 0 0 96 -4,-4.1 2,-0.4 -9,-0.1 -3,-0.2 0.633 94.2 93.5-103.9 -21.2 -20.3 -14.6 32.3 40 40 A L S >< S- 0 0 20 -4,-1.6 3,-2.2 -5,-0.5 2,-0.2 -0.670 79.3-113.5 -81.3 132.4 -19.7 -14.4 36.1 41 41 A D T 3 S+ 0 0 101 -2,-0.4 11,-0.1 1,-0.3 10,-0.1 -0.436 104.6 18.0 -60.4 127.9 -16.2 -13.6 37.2 42 42 A G T 3 S- 0 0 62 -2,-0.2 -1,-0.3 -5,-0.1 6,-0.1 0.284 113.9-113.2 93.1 -15.7 -14.9 -16.7 39.0 43 43 A G < - 0 0 18 -3,-2.2 2,-1.2 -7,-0.2 -6,-0.1 -0.370 64.1 -16.4 88.1-166.0 -17.5 -19.0 37.5 44 44 A F S S+ 0 0 32 -2,-0.1 2,-0.3 4,-0.1 -1,-0.1 -0.674 90.2 113.6 -85.7 94.8 -20.3 -20.9 39.1 45 45 A K S > S- 0 0 106 -2,-1.2 4,-1.5 1,-0.1 3,-0.2 -0.965 73.2-116.1-156.1 153.0 -19.6 -20.9 42.8 46 46 A V H > S+ 0 0 21 -2,-0.3 4,-2.3 1,-0.2 5,-0.2 0.879 115.8 57.4 -61.0 -41.4 -21.4 -19.4 45.8 47 47 A E H > S+ 0 0 117 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.864 102.6 52.2 -59.0 -42.3 -18.3 -17.3 46.5 48 48 A S H > S+ 0 0 11 -3,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.871 111.1 47.5 -63.1 -38.5 -18.3 -15.7 43.0 49 49 A I H X S+ 0 0 13 -4,-1.5 4,-2.1 2,-0.2 -2,-0.2 0.904 110.8 51.4 -69.1 -42.1 -22.0 -14.7 43.5 50 50 A I H X S+ 0 0 25 -4,-2.3 4,-2.5 2,-0.2 5,-0.2 0.955 110.9 48.8 -58.8 -50.4 -21.3 -13.2 47.0 51 51 A Y H X S+ 0 0 146 -4,-2.4 4,-2.0 1,-0.2 5,-0.2 0.916 112.4 47.3 -56.1 -48.5 -18.4 -11.2 45.6 52 52 A Q H X S+ 0 0 42 -4,-2.1 4,-1.0 1,-0.2 -1,-0.2 0.821 112.2 51.5 -64.6 -30.0 -20.5 -9.9 42.7 53 53 A V H < S+ 0 0 17 -4,-2.1 10,-1.7 2,-0.2 -2,-0.2 0.931 113.6 42.5 -72.9 -42.7 -23.3 -9.0 45.1 54 54 A E H < S+ 0 0 43 -4,-2.5 10,-1.5 8,-0.2 -2,-0.2 0.811 126.8 28.6 -71.4 -38.0 -21.2 -7.0 47.5 55 55 A N H < S- 0 0 90 -4,-2.0 7,-0.2 -5,-0.2 -1,-0.2 0.406 98.1-143.3-104.8 -5.8 -19.1 -5.1 45.1 56 56 A G < - 0 0 4 -4,-1.0 2,-0.2 5,-0.3 -1,-0.2 -0.007 3.9-121.6 69.9-177.2 -21.4 -4.8 42.1 57 57 A K B > -A 60 0A 90 3,-2.4 3,-2.4 1,-0.2 -1,-0.1 -0.675 54.4 -58.0-170.3 109.2 -20.5 -5.0 38.4 58 58 A G T 3 S+ 0 0 80 1,-0.3 -1,-0.2 -2,-0.2 0, 0.0 -0.267 129.7 6.3 55.9-117.2 -21.2 -2.3 35.8 59 59 A A T 3 S+ 0 0 69 -3,-0.1 -1,-0.3 -2,-0.1 -3,-0.0 0.428 115.7 90.9 -74.4 -4.9 -24.9 -1.6 35.7 60 60 A M B < S-A 57 0A 41 -3,-2.4 -3,-2.4 -35,-0.0 0, 0.0 -0.889 80.0-133.4 -92.4 121.8 -25.4 -3.9 38.7 61 61 A P - 0 0 71 0, 0.0 -5,-0.3 0, 0.0 2,-0.3 -0.259 19.0-107.3 -71.4 164.7 -25.1 -1.9 41.9 62 62 A A - 0 0 48 -7,-0.2 -8,-0.2 -6,-0.2 -7,-0.2 -0.629 23.2-160.6 -87.6 148.4 -23.0 -3.0 44.9 63 63 A W >> + 0 0 23 -10,-1.7 4,-2.4 -2,-0.3 3,-1.3 0.423 62.9 101.5-113.8 -0.2 -25.0 -4.2 47.9 64 64 A A T 34 S+ 0 0 56 -10,-1.5 -1,-0.1 1,-0.3 -10,-0.1 0.777 86.3 47.5 -54.2 -29.4 -22.5 -3.9 50.7 65 65 A D T 34 S+ 0 0 163 -11,-0.1 -1,-0.3 -3,-0.1 -2,-0.1 0.578 118.8 37.1 -88.4 -15.2 -24.1 -0.7 51.9 66 66 A R T <4 S+ 0 0 162 -3,-1.3 2,-0.2 2,-0.1 -2,-0.2 0.664 110.1 52.7-109.4 -30.9 -27.7 -1.9 51.9 67 67 A L S < S- 0 0 23 -4,-2.4 2,-0.2 -13,-0.1 -58,-0.0 -0.668 76.8-115.6-109.7 163.0 -27.6 -5.5 53.0 68 68 A S > - 0 0 50 -2,-0.2 4,-2.0 1,-0.1 5,-0.2 -0.622 32.6-107.9 -90.4 162.8 -26.2 -7.3 56.0 69 69 A E H > S+ 0 0 113 1,-0.2 4,-1.8 -2,-0.2 5,-0.1 0.841 120.8 48.7 -57.2 -37.3 -23.4 -9.9 55.7 70 70 A E H > S+ 0 0 128 1,-0.2 4,-2.2 2,-0.2 -1,-0.2 0.878 107.4 54.1 -77.5 -31.2 -25.8 -12.7 56.4 71 71 A E H > S+ 0 0 50 1,-0.2 4,-2.3 2,-0.2 -2,-0.2 0.876 107.9 51.3 -65.9 -38.0 -28.3 -11.5 53.9 72 72 A I H X S+ 0 0 2 -4,-2.0 4,-2.0 2,-0.2 -2,-0.2 0.902 110.3 48.0 -64.8 -44.1 -25.6 -11.5 51.2 73 73 A Q H X S+ 0 0 69 -4,-1.8 4,-1.9 1,-0.2 -2,-0.2 0.917 113.4 49.0 -64.1 -42.1 -24.6 -15.1 52.0 74 74 A A H X S+ 0 0 2 -4,-2.2 4,-1.9 2,-0.2 -68,-0.2 0.898 111.7 46.7 -62.0 -49.4 -28.3 -16.2 52.0 75 75 A V H X S+ 0 0 2 -4,-2.3 4,-2.3 1,-0.2 5,-0.2 0.901 112.0 52.6 -61.6 -41.1 -29.2 -14.6 48.7 76 76 A A H X S+ 0 0 0 -4,-2.0 4,-2.0 1,-0.2 -2,-0.2 0.893 111.7 44.2 -60.4 -47.8 -26.0 -16.0 47.1 77 77 A E H X S+ 0 0 63 -4,-1.9 4,-2.4 1,-0.2 -1,-0.2 0.802 112.8 53.1 -69.1 -31.3 -26.8 -19.6 48.2 78 78 A Y H X S+ 0 0 37 -4,-1.9 4,-1.9 2,-0.2 -2,-0.2 0.851 110.5 45.9 -68.6 -43.4 -30.4 -19.1 47.1 79 79 A V H X S+ 0 0 12 -4,-2.3 4,-1.7 2,-0.2 -2,-0.2 0.882 113.4 51.1 -66.7 -37.7 -29.3 -18.0 43.7 80 80 A F H X S+ 0 0 61 -4,-2.0 4,-2.1 1,-0.2 -2,-0.2 0.923 109.4 49.8 -63.7 -45.4 -26.9 -20.9 43.6 81 81 A K H X S+ 0 0 86 -4,-2.4 4,-2.1 1,-0.2 -1,-0.2 0.882 109.3 52.7 -60.3 -43.1 -29.6 -23.4 44.6 82 82 A Q H <>S+ 0 0 35 -4,-1.9 5,-2.4 1,-0.2 6,-0.4 0.846 111.0 44.9 -62.7 -40.5 -31.9 -22.1 41.9 83 83 A A H <5S+ 0 0 4 -4,-1.7 -50,-0.4 3,-0.2 3,-0.4 0.878 111.3 53.0 -72.7 -41.5 -29.4 -22.4 39.0 84 84 A T H <5S+ 0 0 71 -4,-2.1 -2,-0.2 1,-0.3 -1,-0.2 0.953 118.7 35.2 -57.0 -52.7 -28.3 -25.9 40.1 85 85 A D T <5S- 0 0 94 -4,-2.1 -1,-0.3 -5,-0.2 -2,-0.2 0.367 105.9-130.8 -82.5 -3.2 -31.9 -27.2 40.2 86 86 A A T 5 + 0 0 76 -3,-0.4 -3,-0.2 -5,-0.1 -4,-0.1 0.872 53.8 152.2 53.2 43.2 -32.8 -25.0 37.2 87 87 A A < + 0 0 39 -5,-2.4 2,-0.5 -6,-0.2 -4,-0.1 0.376 15.1 128.4 -87.6 5.3 -35.8 -23.7 39.1 88 88 A W - 0 0 27 -6,-0.4 2,-0.8 -57,-0.1 -69,-0.0 -0.490 41.2-161.5 -70.3 116.6 -36.2 -20.2 37.5 89 89 A K 0 0 192 -2,-0.5 -69,-0.1 0, 0.0 -68,-0.1 -0.786 360.0 360.0-105.3 97.5 -39.9 -19.7 36.2 90 90 A Y 0 0 158 -2,-0.8 -70,-0.1 -70,-0.2 -69,-0.0 -0.484 360.0 360.0-115.8 360.0 -40.2 -16.8 33.7