==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT (HEME PROTEIN) 01-JUL-94 2CY3 . COMPND 2 MOLECULE: CYTOCHROME C3; . SOURCE 2 ORGANISM_SCIENTIFIC: DESULFOMICROBIUM NORVEGICUM; . AUTHOR M.CZJZEK,F.PAYAN,R.HASER . 118 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9168.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 63 53.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 5.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 0.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 8.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 20 16.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 20 16.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 2.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 109 0, 0.0 2,-0.4 0, 0.0 56,-0.0 0.000 360.0 360.0 360.0 179.2 18.9 40.1 16.1 2 2 A D - 0 0 157 0, 0.0 0, 0.0 0, 0.0 0, 0.0 -0.905 360.0-118.9-109.4 139.9 18.5 41.2 12.5 3 3 A A - 0 0 68 -2,-0.4 34,-0.0 1,-0.1 41,-0.0 -0.499 31.9-112.7 -75.6 143.5 16.9 39.0 9.9 4 4 A P - 0 0 58 0, 0.0 32,-0.3 0, 0.0 -1,-0.1 -0.252 41.0 -87.6 -70.3 168.1 19.1 38.0 6.9 5 5 A G > - 0 0 40 1,-0.1 3,-1.6 31,-0.1 31,-0.2 -0.149 41.3 -96.2 -69.7 172.7 18.3 39.2 3.4 6 6 A D T 3 S+ 0 0 74 1,-0.3 -1,-0.1 29,-0.2 28,-0.1 0.404 114.2 74.8 -72.5 -0.5 16.0 37.6 0.9 7 7 A D T 3 S+ 0 0 140 26,-0.1 -1,-0.3 2,-0.1 -2,-0.0 0.532 71.0 126.0 -86.9 -7.2 18.8 35.7 -0.9 8 8 A Y < - 0 0 87 -3,-1.6 26,-2.6 26,-0.2 2,-0.4 -0.191 44.2-161.7 -54.2 137.2 18.9 33.4 2.1 9 9 A V E -A 33 0A 72 24,-0.2 2,-0.5 26,-0.0 -2,-0.1 -0.978 10.3-145.2-129.0 132.1 18.6 29.7 1.3 10 10 A I E +A 32 0A 35 22,-3.1 22,-2.8 -2,-0.4 2,-0.3 -0.866 27.7 171.4 -95.7 127.3 17.7 26.9 3.7 11 11 A S - 0 0 66 -2,-0.5 3,-0.1 20,-0.2 19,-0.1 -0.813 39.0 -83.8-128.6 170.6 19.4 23.6 3.1 12 12 A A - 0 0 34 -2,-0.3 3,-0.1 17,-0.2 2,-0.1 -0.467 51.8-100.5 -74.8 147.1 19.7 20.2 4.9 13 13 A P > - 0 0 28 0, 0.0 3,-2.1 0, 0.0 -1,-0.1 -0.419 50.5 -88.8 -67.6 142.3 22.3 19.9 7.6 14 14 A E T 3 S+ 0 0 170 1,-0.3 3,-0.1 -2,-0.1 -3,-0.0 -0.217 116.9 32.1 -52.1 136.3 25.5 18.1 6.6 15 15 A G T 3 S+ 0 0 53 1,-0.3 -1,-0.3 -3,-0.1 55,-0.1 0.238 81.7 156.2 97.9 -12.3 25.2 14.4 7.1 16 16 A M < - 0 0 28 -3,-2.1 -1,-0.3 1,-0.1 55,-0.2 -0.208 34.2-138.9 -50.4 128.1 21.4 14.4 6.4 17 17 A K - 0 0 111 53,-3.0 2,-0.3 -3,-0.1 -1,-0.1 -0.332 12.6-151.5 -84.9 171.8 20.2 11.0 5.3 18 18 A A - 0 0 32 54,-0.1 8,-0.4 -2,-0.1 10,-0.1 -0.997 28.0 -95.7-149.2 141.3 17.7 10.3 2.5 19 19 A K - 0 0 108 -2,-0.3 8,-0.3 8,-0.1 54,-0.0 -0.330 47.4-118.9 -54.5 125.1 15.2 7.5 1.8 20 20 A P - 0 0 61 0, 0.0 2,-1.5 0, 0.0 -1,-0.1 -0.332 19.0-117.4 -67.1 153.5 16.9 5.0 -0.5 21 21 A K B > -B 24 0B 136 3,-3.0 3,-2.2 1,-0.1 2,-2.1 -0.640 66.8 -75.0 -90.6 75.8 15.2 4.5 -3.9 22 22 A G T 3 S- 0 0 74 -2,-1.5 -1,-0.1 1,-0.3 4,-0.1 -0.471 116.0 -13.7 72.1 -83.4 14.4 0.8 -3.3 23 23 A D T 3 S+ 0 0 154 -2,-2.1 -1,-0.3 2,-0.1 3,-0.0 0.513 122.9 86.3-123.1 -19.0 17.9 -0.5 -3.8 24 24 A K B < S-B 21 0B 147 -3,-2.2 -3,-3.0 1,-0.1 2,-0.1 -0.626 91.4 -97.4 -88.1 142.2 19.5 2.5 -5.4 25 25 A P - 0 0 104 0, 0.0 -6,-0.1 0, 0.0 -1,-0.1 -0.396 43.1-135.0 -60.0 129.8 21.0 5.3 -3.2 26 26 A G - 0 0 32 -8,-0.4 2,-0.3 -2,-0.1 -8,-0.1 -0.106 14.5-138.7 -77.6-178.8 18.6 8.1 -2.7 27 27 A A - 0 0 80 -8,-0.3 -8,-0.1 -10,-0.1 2,-0.1 -0.943 18.7 -97.6-141.8 160.1 19.3 11.9 -2.9 28 28 A L - 0 0 101 -2,-0.3 3,-0.1 1,-0.1 -10,-0.1 -0.381 40.5-109.8 -75.5 156.9 18.4 15.1 -1.2 29 29 A Q - 0 0 128 1,-0.2 -17,-0.2 -2,-0.1 -1,-0.1 -0.291 47.8 -80.8 -76.0 168.8 15.7 17.4 -2.4 30 30 A K - 0 0 92 85,-0.2 -1,-0.2 1,-0.1 88,-0.1 -0.320 58.1 -93.8 -67.5 158.8 16.6 20.8 -3.9 31 31 A T B -C 117 0C 43 86,-1.0 85,-1.8 84,-0.2 86,-1.6 -0.297 35.6-118.1 -74.1 162.4 17.3 23.6 -1.4 32 32 A V E -A 10 0A 21 -22,-2.8 -22,-3.1 83,-0.2 83,-0.2 -0.870 12.4-144.9-112.9 109.3 14.6 26.1 -0.2 33 33 A P E -A 9 0A 54 0, 0.0 -24,-0.2 0, 0.0 -25,-0.1 -0.471 20.9-167.6 -66.1 135.6 14.9 29.9 -0.8 34 34 A F - 0 0 44 -26,-2.6 2,-0.7 -2,-0.1 -26,-0.2 -0.923 8.4-162.2-133.4 109.3 13.4 31.7 2.2 35 35 A P > - 0 0 38 0, 0.0 3,-0.9 0, 0.0 4,-0.2 -0.801 4.5-166.3 -96.0 110.9 12.7 35.4 2.1 36 36 A H G > S+ 0 0 44 -2,-0.7 3,-2.3 -32,-0.3 -31,-0.1 0.849 85.3 64.3 -60.1 -37.3 12.2 37.0 5.5 37 37 A T G > S+ 0 0 91 1,-0.3 3,-1.0 2,-0.2 -1,-0.2 0.808 97.1 58.4 -59.3 -27.1 10.7 40.2 4.1 38 38 A K G < S+ 0 0 161 -3,-0.9 -1,-0.3 1,-0.2 -2,-0.2 0.558 108.0 46.8 -79.2 -5.7 7.7 38.2 2.9 39 39 A H G X S+ 0 0 56 -3,-2.3 3,-1.9 -4,-0.2 -1,-0.2 0.062 71.5 118.1-122.5 23.7 7.1 37.0 6.5 40 40 A A T < + 0 0 82 -3,-1.0 -1,-0.1 1,-0.3 -2,-0.1 0.731 69.5 64.6 -62.5 -24.1 7.3 40.4 8.2 41 41 A T T 3 S+ 0 0 147 -3,-0.2 2,-0.5 -4,-0.1 -1,-0.3 0.521 91.7 76.9 -78.7 -5.2 3.7 40.0 9.3 42 42 A V S < S- 0 0 43 -3,-1.9 -3,-0.1 2,-0.0 5,-0.0 -0.903 90.9-116.2-107.8 130.6 4.7 37.1 11.5 43 43 A E >> - 0 0 146 -2,-0.5 3,-1.0 1,-0.1 4,-0.8 -0.364 22.0-122.9 -63.6 144.6 6.5 37.8 14.8 44 44 A C H >> S+ 0 0 87 1,-0.3 4,-3.0 2,-0.2 3,-0.8 0.913 110.5 58.9 -54.2 -44.6 10.1 36.4 14.9 45 45 A V H 34 S+ 0 0 78 1,-0.2 -1,-0.3 2,-0.2 6,-0.2 0.766 91.2 69.1 -57.9 -29.3 9.2 34.3 18.0 46 46 A Q H <4 S+ 0 0 137 -3,-1.0 3,-0.3 1,-0.2 -1,-0.2 0.918 117.7 21.8 -59.7 -42.2 6.4 32.4 16.2 47 47 A C H << S+ 0 0 37 -3,-0.8 2,-1.8 -4,-0.8 -2,-0.2 0.894 125.3 52.8 -88.4 -46.7 9.0 30.6 14.0 48 48 A H S >< S+ 0 0 53 -4,-3.0 3,-2.0 -5,-0.2 -1,-0.2 -0.483 76.3 169.1 -88.0 64.6 12.0 31.1 16.3 49 49 A H T 3 + 0 0 127 -2,-1.8 -1,-0.2 -3,-0.3 3,-0.2 0.531 66.3 51.5 -59.9 -12.7 10.0 29.6 19.1 50 50 A T T 3> S+ 0 0 54 1,-0.1 4,-2.5 9,-0.1 -1,-0.3 0.242 72.5 116.5-109.5 12.0 12.9 29.1 21.5 51 51 A L T <4>S+ 0 0 31 -3,-2.0 5,-2.2 1,-0.2 6,-0.4 0.889 76.6 47.4 -44.6 -52.1 14.1 32.7 21.2 52 52 A E T >45S+ 0 0 182 1,-0.2 3,-1.9 3,-0.2 -1,-0.2 0.912 112.3 46.8 -60.3 -49.8 13.4 33.5 24.8 53 53 A A T 345S+ 0 0 92 1,-0.3 -1,-0.2 -4,-0.2 -2,-0.2 0.837 111.8 54.6 -61.3 -31.7 15.0 30.4 26.3 54 54 A D T ><5S- 0 0 34 -4,-2.5 3,-1.5 3,-0.1 -1,-0.3 0.198 117.4-116.7 -86.0 11.4 18.0 31.2 24.0 55 55 A G T < 5 - 0 0 69 -3,-1.9 -3,-0.2 1,-0.3 -2,-0.1 0.811 69.3 -50.0 58.3 36.6 18.2 34.7 25.4 56 56 A G T 3 - 0 0 121 -2,-0.3 3,-1.7 1,-0.1 7,-0.1 -0.371 32.4-121.3 -63.9 142.4 19.5 27.3 13.6 61 61 A C T 3 S+ 0 0 43 1,-0.3 6,-2.3 5,-0.1 -1,-0.1 0.757 110.9 49.1 -55.4 -30.2 16.6 24.9 13.8 62 62 A T T 3 S+ 0 0 27 4,-0.2 -1,-0.3 6,-0.1 4,-0.2 0.404 80.8 131.5 -94.4 3.2 18.9 21.9 13.5 63 63 A T S X S- 0 0 43 -3,-1.7 3,-2.6 1,-0.2 5,-0.1 -0.107 74.1 -72.6 -58.5 152.0 21.5 22.9 16.1 64 64 A S T 3 S+ 0 0 120 1,-0.3 -1,-0.2 3,-0.1 3,-0.1 -0.169 124.6 22.5 -47.1 127.0 22.6 20.4 18.7 65 65 A G T 3 S+ 0 0 66 1,-0.3 -1,-0.3 -3,-0.1 -2,-0.1 0.337 119.5 69.0 93.7 -6.6 19.8 19.7 21.2 66 66 A C S < S- 0 0 40 -3,-2.6 2,-2.5 -4,-0.2 -1,-0.3 0.103 118.5 -24.5-113.2-132.4 17.1 20.9 18.8 67 67 A H S S+ 0 0 31 -6,-2.3 15,-0.1 1,-0.2 -3,-0.1 -0.495 87.7 144.5 -84.2 72.0 15.9 19.4 15.5 68 68 A D + 0 0 58 -2,-2.5 -1,-0.2 -5,-0.1 15,-0.1 0.430 16.9 118.7 -92.9 -6.9 19.3 17.6 15.4 69 69 A S - 0 0 21 13,-1.2 15,-0.4 -3,-0.2 -53,-0.0 -0.400 42.1-166.9 -66.5 142.0 18.4 14.2 13.9 70 70 A L + 0 0 66 13,-0.1 -53,-3.0 -54,-0.1 2,-0.2 0.278 53.6 117.4-106.5 5.6 20.1 13.4 10.5 71 71 A E - 0 0 97 -55,-0.2 13,-0.4 1,-0.1 2,-0.1 -0.502 67.2-117.9 -79.2 141.2 17.7 10.5 10.0 72 72 A F - 0 0 56 -2,-0.2 2,-0.4 1,-0.1 5,-0.1 -0.411 35.7 -96.9 -76.5 154.2 15.3 10.3 7.1 73 73 A R + 0 0 105 -2,-0.1 2,-0.2 3,-0.1 -1,-0.1 -0.562 56.6 150.4 -76.6 126.0 11.5 10.3 7.7 74 74 A D - 0 0 85 -2,-0.4 4,-0.1 -3,-0.0 -3,-0.0 -0.681 59.4 -83.8-137.5-168.7 9.9 6.8 7.7 75 75 A K S > S+ 0 0 179 -2,-0.2 3,-1.0 2,-0.2 4,-0.2 0.914 122.2 53.7 -71.1 -43.0 7.0 5.0 9.2 76 76 A A T 3 S+ 0 0 107 1,-0.2 3,-0.2 2,-0.1 -1,-0.2 0.856 122.9 27.1 -61.6 -37.1 8.8 4.0 12.4 77 77 A N T > S+ 0 0 42 1,-0.1 3,-1.6 -5,-0.1 -1,-0.2 0.086 81.1 123.5-115.3 25.2 9.8 7.6 13.2 78 78 A A T < S+ 0 0 35 -3,-1.0 -1,-0.1 1,-0.3 -2,-0.1 0.736 78.2 46.3 -56.6 -28.1 7.0 9.5 11.4 79 79 A K T 3 S+ 0 0 203 -4,-0.2 2,-0.7 -3,-0.2 -1,-0.3 0.456 79.9 120.2 -95.9 -4.2 6.0 11.4 14.7 80 80 A D X - 0 0 45 -3,-1.6 3,-1.8 1,-0.2 6,-0.3 -0.497 46.5-163.9 -69.9 109.6 9.6 12.4 15.8 81 81 A I T 3 S+ 0 0 92 -2,-0.7 -1,-0.2 1,-0.3 6,-0.2 0.616 84.4 74.1 -67.9 -10.9 9.7 16.2 16.0 82 82 A K T 3 S+ 0 0 98 -15,-0.1 -13,-1.2 4,-0.1 -1,-0.3 0.691 75.6 102.7 -75.5 -17.6 13.5 15.9 16.0 83 83 A L S <> S- 0 0 1 -3,-1.8 4,-2.5 -6,-0.2 5,-0.2 -0.425 74.0-135.8 -68.8 140.2 13.4 15.0 12.3 84 84 A V H > S+ 0 0 15 -15,-0.4 4,-2.4 -13,-0.4 5,-0.4 0.957 104.1 52.4 -60.7 -48.9 14.3 17.8 9.8 85 85 A E H > S+ 0 0 82 1,-0.2 4,-2.1 2,-0.2 5,-0.3 0.875 112.4 45.0 -57.1 -41.3 11.4 17.0 7.5 86 86 A N H > S+ 0 0 20 -6,-0.3 4,-2.4 2,-0.2 5,-0.3 0.949 111.7 51.1 -70.6 -46.5 8.9 17.2 10.3 87 87 A A H X S+ 0 0 15 -4,-2.5 4,-1.4 -7,-0.2 -2,-0.2 0.947 119.3 35.3 -55.1 -53.4 10.3 20.4 11.9 88 88 A F H X S+ 0 0 44 -4,-2.4 4,-2.7 2,-0.2 5,-0.4 0.889 117.0 51.0 -71.6 -41.1 10.3 22.4 8.6 89 89 A H H X>S+ 0 0 63 -4,-2.1 4,-1.1 -5,-0.4 5,-1.0 0.916 109.0 51.2 -66.1 -39.7 7.2 20.9 7.0 90 90 A T H <5S+ 0 0 74 -4,-2.4 4,-0.5 -5,-0.3 5,-0.3 0.920 118.1 39.8 -63.8 -39.7 5.0 21.6 10.1 91 91 A Q H X5S+ 0 0 75 -4,-1.4 4,-1.0 -5,-0.3 -2,-0.2 0.992 125.2 31.3 -72.2 -61.2 6.2 25.2 10.2 92 92 A C H X5S+ 0 0 34 -4,-2.7 4,-1.6 2,-0.1 -3,-0.2 0.950 123.3 40.5 -63.4 -57.0 6.3 26.1 6.5 93 93 A I H X5S+ 0 0 57 -4,-1.1 4,-3.0 -5,-0.4 5,-0.3 0.924 108.2 57.0 -63.7 -51.5 3.5 24.0 4.9 94 94 A D H >S+ 0 0 51 -4,-2.5 5,-0.9 2,-0.2 4,-0.3 0.901 107.8 55.2 -68.1 -37.4 -3.9 30.8 4.3 100 100 A K H ><5S+ 0 0 99 -4,-2.4 3,-1.6 1,-0.2 -2,-0.2 0.917 105.9 52.5 -59.5 -43.9 -4.7 29.3 0.9 101 101 A K H 3<5S+ 0 0 183 -4,-2.2 -1,-0.2 1,-0.3 -2,-0.2 0.882 107.3 51.7 -59.6 -39.2 -8.0 28.0 2.4 102 102 A D T 3<5S- 0 0 116 -4,-1.5 -1,-0.3 -5,-0.2 -2,-0.2 0.406 114.6-119.1 -80.5 3.3 -8.9 31.4 3.6 103 103 A K T < 5 + 0 0 197 -3,-1.6 -3,-0.2 -4,-0.3 -2,-0.1 0.979 69.7 118.6 56.6 66.2 -8.3 32.9 0.1 104 104 A K S > S- 0 0 47 1,-0.1 3,-1.1 -17,-0.0 4,-0.7 -0.672 79.4-127.1 -86.2 139.6 3.7 22.1 -3.7 111 111 A C H >> S+ 0 0 99 -2,-0.3 4,-2.9 1,-0.3 3,-1.3 0.900 109.3 46.6 -48.9 -51.8 7.1 20.2 -3.2 112 112 A G H 34 S+ 0 0 58 1,-0.3 -1,-0.3 2,-0.2 -2,-0.0 0.696 106.3 59.2 -68.6 -19.2 8.6 21.6 -6.4 113 113 A K H <4 S+ 0 0 113 -3,-1.1 -1,-0.3 1,-0.1 -2,-0.2 0.550 117.2 30.9 -86.3 -10.5 7.5 25.1 -5.7 114 114 A C H << S+ 0 0 31 -3,-1.3 2,-1.1 -4,-0.7 3,-0.3 0.700 113.6 59.7-112.0 -43.9 9.4 25.3 -2.4 115 115 A H S < S+ 0 0 40 -4,-2.9 -1,-0.3 -5,-0.3 -83,-0.2 -0.793 72.0 131.3 -86.9 102.0 12.4 23.0 -3.1 116 116 A T + 0 0 60 -85,-1.8 2,-0.5 -2,-1.1 -1,-0.2 0.729 16.6 110.2-124.8 -38.9 13.7 25.0 -6.1 117 117 A T B C 31 0C 71 -86,-1.6 -86,-1.0 -3,-0.3 -1,-0.0 -0.287 360.0 360.0 -56.7 102.7 17.5 25.7 -6.0 118 118 A N 0 0 188 -2,-0.5 -1,-0.2 -88,-0.1 -2,-0.1 -0.174 360.0 360.0-171.2 360.0 19.0 23.6 -8.8