==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NEUROPEPTIDE 15-SEP-99 1D1F . COMPND 2 MOLECULE: C-TERMINAL ANALOGUE OF NEUROPEPTIDE Y, A POTENT . SOURCE 2 SYNTHETIC: YES; . AUTHOR S.YAO,R.S.NORTON . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1841.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 9 69.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 30.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 5 38.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 24 A A > 0 0 119 0, 0.0 3,-3.5 0, 0.0 4,-0.3 0.000 360.0 360.0 360.0 53.6 3.1 3.2 -0.4 2 25 A R G >> + 0 0 195 1,-0.3 3,-2.7 2,-0.2 4,-0.6 0.698 360.0 65.3 -24.0 -49.3 5.7 2.4 -3.1 3 26 A H G 34 S+ 0 0 121 1,-0.3 3,-0.4 2,-0.2 4,-0.3 0.807 99.1 56.7 -51.6 -28.2 8.0 5.4 -2.2 4 27 A Y G <> S+ 0 0 162 -3,-3.5 4,-1.2 1,-0.2 -1,-0.3 0.394 80.9 83.4 -84.6 -0.7 8.6 3.6 1.1 5 28 A K H <> S+ 0 0 116 -3,-2.7 4,-2.3 -4,-0.3 -1,-0.2 0.936 82.6 67.1 -67.2 -44.4 9.8 0.4 -0.6 6 29 A N H < S+ 0 0 97 -4,-0.6 -1,-0.2 -3,-0.4 -2,-0.2 0.884 97.8 50.0 -37.1 -59.7 13.2 2.3 -0.7 7 30 A L H >> S+ 0 0 71 -4,-0.3 3,-2.0 1,-0.3 4,-1.5 0.945 114.9 41.1 -49.4 -58.5 13.6 2.2 3.1 8 31 A I H 3X S+ 0 0 118 -4,-1.2 4,-0.5 1,-0.3 -1,-0.3 0.759 115.2 56.1 -64.2 -22.1 12.9 -1.5 3.5 9 32 A E H 3< S+ 0 0 61 -4,-2.3 -1,-0.3 -5,-0.2 -2,-0.2 0.344 100.9 57.0 -92.0 5.9 15.0 -1.9 0.3 10 33 A R H X4 S+ 0 0 166 -3,-2.0 3,-0.8 -5,-0.2 -2,-0.2 0.789 86.6 78.2-100.0 -43.8 18.0 -0.1 1.9 11 34 A Q H 3< S+ 0 0 150 -4,-1.5 -2,-0.1 1,-0.3 -3,-0.1 0.820 115.1 16.0 -29.8 -66.4 18.3 -2.4 4.9 12 35 A R T 3< 0 0 235 -4,-0.5 -1,-0.3 1,-0.2 -2,-0.1 0.510 360.0 360.0 -91.8 -4.4 20.1 -5.3 3.0 13 36 A Y < 0 0 230 -3,-0.8 -1,-0.2 -5,-0.1 -2,-0.2 -0.615 360.0 360.0-132.1 360.0 20.9 -2.9 0.1