==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=26-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER GENE REGULATION 20-SEP-99 1D1N . COMPND 2 MOLECULE: INITIATION FACTOR 2; . SOURCE 2 ORGANISM_SCIENTIFIC: GEOBACILLUS STEAROTHERMOPHILUS; . AUTHOR S.MEUNIER,S.SPURIO,M.CZISCH,R.WECHSELBERGER,M.GUEUNNEUGUES . 98 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6772.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 53 54.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 31 31.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 11 11.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 0 2 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 143 A Y 0 0 232 0, 0.0 2,-0.2 0, 0.0 93,-0.0 0.000 360.0 360.0 360.0 147.3 10.1 -4.9 -14.0 2 144 A E - 0 0 174 91,-0.0 2,-1.4 1,-0.0 90,-0.1 -0.657 360.0-115.2-101.2 157.8 6.8 -3.8 -15.4 3 145 A E + 0 0 111 -2,-0.2 89,-0.2 88,-0.1 3,-0.1 -0.411 53.8 166.3 -88.2 59.2 5.5 -4.4 -18.9 4 146 A K - 0 0 163 -2,-1.4 88,-1.2 1,-0.2 2,-0.0 0.226 49.2 -42.2 -59.2-169.1 5.4 -0.7 -19.9 5 147 A V E +A 91 0A 34 86,-0.2 86,-0.3 1,-0.1 -1,-0.2 -0.318 49.2 174.9 -61.7 141.1 4.9 0.5 -23.4 6 148 A I E S+ 0 0 7 84,-2.9 26,-2.8 -3,-0.1 28,-0.3 0.316 78.1 7.1-126.5 2.2 6.9 -1.3 -26.1 7 149 A G E +A 90 0A 0 83,-1.6 83,-2.9 24,-0.3 2,-0.4 -0.098 67.1 175.8 175.8 74.3 5.5 0.5 -29.2 8 150 A Q E +A 89 0A 43 81,-0.3 21,-3.2 31,-0.1 22,-0.8 -0.744 20.4 151.9 -91.7 132.9 3.2 3.5 -28.8 9 151 A A E -AB 88 28A 0 79,-2.5 79,-1.7 -2,-0.4 2,-0.5 -0.934 42.5-113.5-151.9 174.2 2.2 5.1 -32.0 10 152 A E E -AB 87 27A 79 17,-2.8 17,-3.7 77,-0.3 77,-0.3 -0.969 39.8-110.0-118.7 122.7 -0.4 7.1 -33.9 11 153 A V E - B 0 26A 14 75,-2.3 15,-0.3 -2,-0.5 3,-0.1 -0.227 28.5-177.1 -52.1 132.3 -2.3 5.6 -36.8 12 154 A R - 0 0 76 13,-3.4 2,-0.2 1,-0.5 14,-0.2 0.907 61.9 -62.4 -89.3 -61.5 -1.4 7.1 -40.1 13 155 A Q - 0 0 101 12,-0.3 12,-2.5 70,-0.1 -1,-0.5 -0.846 50.2-116.7-162.4-163.8 -3.9 5.2 -42.1 14 156 A T - 0 0 18 10,-0.3 2,-0.3 -2,-0.2 10,-0.3 -0.874 14.6-123.0-143.8 173.6 -4.8 1.6 -43.0 15 157 A F + 0 0 97 -2,-0.3 2,-2.1 2,-0.1 6,-0.8 -0.593 30.0 165.4-125.5 75.5 -5.0 -0.7 -46.0 16 158 A K + 0 0 135 -2,-0.3 2,-0.2 6,-0.3 6,-0.2 -0.427 32.7 153.0 -86.2 63.1 -8.4 -2.2 -46.4 17 159 A V - 0 0 68 -2,-2.1 -2,-0.1 4,-0.3 6,-0.0 -0.573 57.7-125.1 -91.7 156.0 -7.6 -3.2 -49.9 18 160 A S S S+ 0 0 128 -2,-0.2 -2,-0.1 1,-0.2 -1,-0.1 -0.081 111.6 37.2 -91.4 34.7 -9.0 -6.1 -51.9 19 161 A K S S+ 0 0 197 2,-0.1 -1,-0.2 0, 0.0 -3,-0.1 0.395 123.0 29.5-150.8 -32.2 -5.5 -7.4 -52.5 20 162 A V S S- 0 0 88 1,-0.2 -4,-0.1 -5,-0.1 2,-0.1 0.620 87.6-115.4-102.1-103.3 -3.5 -6.7 -49.3 21 163 A G - 0 0 31 -6,-0.8 -4,-0.3 2,-0.0 -1,-0.2 -0.178 56.6 -52.2-159.0-100.4 -5.2 -6.6 -45.9 22 164 A T - 0 0 25 -6,-0.2 54,-0.3 -2,-0.1 2,-0.3 -0.120 56.8-173.1-153.9 35.1 -5.5 -3.7 -43.5 23 165 A I - 0 0 27 -8,-0.7 2,-0.6 -9,-0.2 52,-0.3 -0.126 12.9-158.2 -42.1 95.6 -1.9 -2.6 -43.3 24 166 A A E - C 0 74A 0 50,-1.5 50,-2.8 -2,-0.3 -10,-0.3 -0.742 0.3-150.5 -88.1 119.0 -2.3 0.0 -40.6 25 167 A G E - C 0 73A 9 -12,-2.5 -13,-3.4 -2,-0.6 2,-0.3 -0.612 16.1-175.9 -88.1 146.8 0.4 2.7 -40.5 26 168 A C E -BC 11 72A 0 46,-1.2 46,-1.0 -15,-0.3 2,-0.5 -0.984 25.2-133.0-147.2 135.3 1.4 4.3 -37.2 27 169 A Y E -BC 10 71A 87 -17,-3.7 -17,-2.8 -2,-0.3 2,-0.2 -0.743 34.3-132.8 -86.9 124.1 3.7 7.1 -36.2 28 170 A V E +B 9 0A 0 42,-0.6 -19,-0.3 -2,-0.5 39,-0.0 -0.548 35.4 165.7 -85.5 147.1 5.8 5.9 -33.2 29 171 A T + 0 0 69 -21,-3.2 2,-0.2 -2,-0.2 -20,-0.2 0.143 69.1 23.7-139.9 14.3 6.4 7.9 -30.1 30 172 A D S S- 0 0 73 -22,-0.8 38,-0.6 1,-0.1 3,-0.1 -0.537 111.0 -20.2-150.8-144.7 7.7 5.3 -27.7 31 173 A G S S- 0 0 25 -2,-0.2 37,-0.6 1,-0.2 2,-0.3 0.883 96.6 -56.3 -40.3-105.2 9.5 1.9 -27.7 32 174 A K B -G 67 0B 78 -26,-2.8 2,-1.4 35,-0.2 35,-0.2 -0.989 27.5-132.3-151.0 143.3 9.0 0.1 -31.1 33 175 A I + 0 0 1 33,-0.5 2,-0.1 -2,-0.3 -26,-0.1 -0.660 51.9 161.6 -95.4 78.9 6.2 -1.0 -33.3 34 176 A T - 0 0 0 -2,-1.4 3,-0.5 -28,-0.3 31,-0.2 -0.470 53.4-115.9 -98.0 171.1 7.5 -4.5 -33.9 35 177 A R S S+ 0 0 124 29,-1.6 2,-1.3 1,-0.3 18,-0.3 0.866 112.1 59.7 -70.3 -39.5 6.0 -7.7 -35.2 36 178 A D S S+ 0 0 118 28,-0.3 2,-0.3 16,-0.1 -1,-0.3 -0.357 96.1 85.4 -88.6 55.1 6.6 -9.5 -31.9 37 179 A S S S- 0 0 3 -2,-1.3 16,-1.7 -3,-0.5 55,-0.1 -0.978 72.3-117.7-150.2 159.6 4.5 -7.0 -29.9 38 180 A K E -D 52 0A 77 53,-0.6 14,-0.4 -2,-0.3 2,-0.3 -0.257 27.1-139.8 -89.1-178.5 0.9 -6.4 -28.9 39 181 A V E +D 51 0A 1 12,-3.4 12,-2.4 51,-0.2 51,-0.3 -0.999 21.0 173.7-149.6 146.2 -1.3 -3.4 -29.9 40 182 A R E -D 50 0A 108 -2,-0.3 10,-0.2 10,-0.2 2,-0.2 -0.748 9.7-178.8-154.5 101.9 -3.8 -1.1 -28.3 41 183 A L E -D 49 0A 1 8,-1.3 7,-0.8 47,-0.3 8,-0.7 -0.475 7.7-158.8 -97.5 170.5 -5.3 1.9 -29.9 42 184 A I E -DE 47 87A 43 45,-2.1 45,-1.4 5,-0.3 5,-0.3 -0.987 7.5-147.1-152.1 141.3 -7.8 4.4 -28.6 43 185 A R - 0 0 140 3,-2.4 5,-0.1 -2,-0.3 43,-0.1 0.105 54.2 -75.0 -86.4-156.2 -10.3 6.9 -30.0 44 186 A Q S S+ 0 0 168 1,-0.1 3,-0.1 3,-0.1 -1,-0.0 0.060 129.3 20.7 -93.6 26.5 -11.2 10.2 -28.3 45 187 A G S S- 0 0 66 1,-0.5 2,-0.2 0, 0.0 -1,-0.1 0.399 126.1 -15.6-154.1 -43.7 -13.4 8.4 -25.8 46 188 A I S S- 0 0 122 0, 0.0 -3,-2.4 0, 0.0 -1,-0.5 -0.727 88.5 -41.4-150.4-159.7 -12.5 4.7 -25.4 47 189 A V E -D 42 0A 42 -5,-0.3 -5,-0.3 -2,-0.2 3,-0.1 -0.646 34.2-169.8 -84.9 133.7 -10.6 1.7 -27.0 48 190 A V E - 0 0 26 -7,-0.8 2,-0.3 1,-0.4 33,-0.3 0.830 69.9 -27.0 -88.3 -38.4 -10.9 1.4 -30.8 49 191 A Y E -D 41 0A 50 -8,-0.7 -8,-1.3 31,-0.1 -1,-0.4 -0.972 57.7-158.5-169.6 162.4 -9.3 -2.0 -30.9 50 192 A E E +D 40 0A 95 -2,-0.3 2,-0.4 -10,-0.2 -10,-0.2 -0.985 41.4 73.6-150.1 158.0 -6.9 -4.3 -29.0 51 193 A G E S-D 39 0A 13 -12,-2.4 -12,-3.4 -2,-0.3 2,-0.2 -0.965 73.4 -50.2 146.3-126.4 -4.7 -7.3 -29.6 52 194 A E E -D 38 0A 76 -14,-0.4 2,-0.3 -2,-0.4 -14,-0.2 -0.773 57.7 -74.3-139.9-176.9 -1.4 -7.7 -31.5 53 195 A I - 0 0 3 -16,-1.7 23,-0.3 -18,-0.3 3,-0.1 -0.658 27.6-165.0 -86.8 141.4 0.3 -6.9 -34.7 54 196 A D S S- 0 0 87 21,-3.4 2,-0.3 1,-0.4 22,-0.2 0.894 70.1 -13.1 -89.1 -47.5 -0.7 -8.9 -37.8 55 197 A S E -F 75 0A 49 20,-0.8 20,-0.6 22,-0.1 2,-0.4 -0.970 54.1-140.1-151.2 163.4 2.2 -8.0 -40.0 56 198 A L E +F 74 0A 2 -2,-0.3 2,-0.3 18,-0.2 18,-0.2 -0.923 35.7 142.4-134.4 108.8 5.1 -5.4 -40.3 57 199 A K E -F 73 0A 82 16,-2.1 16,-0.6 -2,-0.4 5,-0.2 -0.915 22.1-169.6-150.1 118.6 6.0 -3.9 -43.7 58 200 A R - 0 0 70 3,-2.4 14,-0.1 -2,-0.3 -2,-0.0 0.026 47.6 -86.0 -88.2-160.5 7.1 -0.4 -44.4 59 201 A Y S S+ 0 0 230 1,-0.1 3,-0.1 3,-0.0 13,-0.1 0.572 126.2 39.6 -87.4 -9.8 7.5 1.4 -47.8 60 202 A K S S- 0 0 183 1,-0.4 2,-0.2 0, 0.0 -1,-0.1 0.851 125.7 -36.0-101.5 -57.7 11.1 0.0 -48.1 61 203 A D S S- 0 0 88 0, 0.0 -3,-2.4 0, 0.0 2,-1.6 -0.833 74.6 -66.1-152.3-170.6 11.0 -3.5 -46.8 62 204 A D - 0 0 90 -5,-0.2 -5,-0.2 -2,-0.2 -6,-0.1 -0.565 60.8-170.8 -89.7 72.6 9.5 -5.9 -44.2 63 205 A V - 0 0 23 -2,-1.6 3,-0.1 1,-0.1 -28,-0.0 -0.206 24.3-142.3 -64.4 154.8 11.1 -4.2 -41.1 64 206 A R S S+ 0 0 131 1,-0.1 -29,-1.6 -30,-0.1 -28,-0.3 0.778 77.5 6.7 -89.6 -29.7 10.8 -5.9 -37.8 65 207 A E - 0 0 68 -31,-0.2 -31,-0.2 -30,-0.1 -1,-0.1 -0.856 52.3-146.2-142.9 178.2 10.3 -2.7 -35.7 66 208 A V + 0 0 4 -2,-0.3 -33,-0.5 -3,-0.1 2,-0.1 -0.554 35.3 158.8-151.2 75.8 9.8 1.1 -36.0 67 209 A A B > +G 32 0B 41 -35,-0.2 2,-1.8 2,-0.1 3,-0.5 -0.452 50.0 32.0 -98.2 172.8 11.5 3.0 -33.1 68 210 A Q T 3 S- 0 0 173 -38,-0.6 -1,-0.1 -37,-0.6 -36,-0.0 -0.561 130.9 -44.5 83.9 -73.5 12.6 6.6 -32.7 69 211 A G T 3 S+ 0 0 21 -2,-1.8 2,-0.4 -40,-0.1 -1,-0.2 0.185 91.3 135.8 178.5 37.7 10.0 8.2 -34.8 70 212 A Y < - 0 0 137 -3,-0.5 -42,-0.6 -4,-0.1 2,-0.5 -0.790 43.9-136.3-102.2 143.0 9.5 6.2 -38.0 71 213 A E E +C 27 0A 105 -2,-0.4 2,-0.3 -44,-0.2 -44,-0.2 -0.833 25.6 176.6-100.2 131.7 6.1 5.3 -39.5 72 214 A C E -C 26 0A 3 -46,-1.0 -46,-1.2 -2,-0.5 2,-0.8 -0.972 32.4-116.0-133.9 148.2 5.5 1.8 -40.9 73 215 A G E +CF 25 57A 14 -16,-0.6 -16,-2.1 -2,-0.3 2,-0.4 -0.744 47.2 157.1 -88.5 111.5 2.5 0.0 -42.4 74 216 A L E -CF 24 56A 0 -50,-2.8 -50,-1.5 -2,-0.8 -18,-0.2 -0.990 38.9-122.6-135.7 144.8 1.5 -2.9 -40.2 75 217 A T E - F 0 55A 8 -20,-0.6 -21,-3.4 -2,-0.4 -20,-0.8 -0.536 19.6-139.5 -82.4 149.0 -1.7 -4.8 -39.7 76 218 A I > - 0 0 0 -54,-0.3 3,-0.6 -23,-0.3 -23,-0.3 -0.784 44.6 -88.5-114.0 88.2 -3.2 -4.9 -36.2 77 219 A K T 3 S- 0 0 93 -2,-0.7 2,-1.6 1,-0.2 -1,-0.3 -0.071 99.4 -16.2 45.5-144.7 -4.5 -8.5 -35.6 78 220 A N T 3 S- 0 0 131 -3,-0.1 -1,-0.2 -25,-0.1 2,-0.2 -0.393 83.5-167.8 -87.1 61.4 -8.1 -8.9 -36.7 79 221 A F < - 0 0 21 -2,-1.6 -2,-0.1 -3,-0.6 -30,-0.1 -0.295 17.5-177.9 -55.2 118.8 -8.8 -5.1 -36.9 80 222 A N S S+ 0 0 132 -2,-0.2 2,-0.3 -32,-0.1 -1,-0.2 0.913 71.4 60.1 -81.6 -47.5 -12.5 -4.4 -37.2 81 223 A D S S+ 0 0 50 -33,-0.3 2,-0.2 1,-0.0 4,-0.1 -0.618 73.6 179.9 -83.6 139.2 -12.1 -0.7 -37.5 82 224 A I + 0 0 40 -2,-0.3 -2,-0.0 1,-0.1 -60,-0.0 -0.746 36.1 54.4-132.3 179.3 -10.0 0.6 -40.4 83 225 A K S S- 0 0 122 -2,-0.2 -1,-0.1 1,-0.1 -70,-0.1 0.832 117.1 -35.9 58.0 115.9 -8.6 3.8 -42.0 84 226 A E S S+ 0 0 100 1,-0.1 -1,-0.1 -74,-0.1 -2,-0.1 0.557 78.5 166.7 3.6 66.6 -6.6 6.1 -39.6 85 227 A G - 0 0 30 1,-0.1 2,-0.2 -4,-0.1 -1,-0.1 0.988 48.8 -71.3 -63.3 -62.6 -8.9 5.3 -36.7 86 228 A D S S- 0 0 46 -43,-0.1 -75,-2.3 -73,-0.1 2,-0.4 -0.767 71.5 -25.4-165.0-148.4 -6.8 6.7 -33.9 87 229 A V E -AE 10 42A 38 -45,-1.4 -45,-2.1 -77,-0.3 -77,-0.3 -0.748 54.5-149.3 -90.4 132.2 -3.6 6.3 -31.7 88 230 A I E -A 9 0A 0 -79,-1.7 -79,-2.5 -2,-0.4 2,-0.3 -0.606 6.7-159.6 -98.6 158.8 -2.2 2.8 -31.3 89 231 A E E -A 8 0A 41 -81,-0.3 2,-0.5 -2,-0.2 -81,-0.3 -0.850 3.3-159.8-145.9 109.5 -0.3 1.4 -28.3 90 232 A A E +A 7 0A 0 -83,-2.9 -84,-2.9 -2,-0.3 -83,-1.6 -0.723 19.1 179.1 -88.1 126.9 2.0 -1.6 -28.3 91 233 A Y E +A 5 0A 102 -2,-0.5 -53,-0.6 -86,-0.3 2,-0.3 -0.989 18.6 108.1-132.6 140.1 2.5 -3.1 -24.9 92 234 A V - 0 0 31 -88,-1.2 -55,-0.1 -2,-0.4 4,-0.1 -0.931 59.1 -60.4-176.6-162.3 4.5 -6.2 -23.7 93 235 A M - 0 0 75 -2,-0.3 3,-0.2 -90,-0.1 -1,-0.1 -0.026 62.1 -82.7 -89.5-163.5 7.6 -7.3 -21.9 94 236 A Q S S+ 0 0 161 1,-0.2 -1,-0.0 -93,-0.0 -91,-0.0 -0.126 106.1 89.5 -96.5 36.8 11.3 -6.6 -22.6 95 237 A E + 0 0 165 -59,-0.1 2,-0.2 2,-0.0 -1,-0.2 -0.265 57.5 127.4-125.8 44.7 11.5 -9.4 -25.2 96 238 A V + 0 0 13 -3,-0.2 2,-3.1 2,-0.1 -59,-0.1 -0.654 68.9 5.7-101.9 159.4 10.6 -7.6 -28.3 97 239 A A 0 0 28 1,-0.2 -1,-0.1 -2,-0.2 -62,-0.1 -0.322 360.0 360.0 70.5 -62.7 12.4 -7.4 -31.7 98 240 A R 0 0 278 -2,-3.1 -1,-0.2 -62,-0.1 -2,-0.1 0.467 360.0 360.0 -89.2 360.0 15.0 -9.9 -30.6