==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIMICROBIAL PROTEIN 19-JAN-06 2DD6 . COMPND 2 MOLECULE: DERMASEPTIN-4; . SOURCE 2 SYNTHETIC: YES; . AUTHOR D.E.SHALEV,S.ROTEM,A.FISH,A.MOR . 13 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 1253.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 6 46.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 3 23.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 63 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 147.3 -1.3 2.4 3.7 2 2 A L - 0 0 69 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.474 360.0 -17.4-157.4 1.4 -3.3 3.8 0.7 3 3 A W S S+ 0 0 174 0, 0.0 7,-0.0 0, 0.0 0, 0.0 0.243 134.8 44.3 177.3 -24.7 -1.2 4.9 -2.2 4 4 A K S S+ 0 0 118 3,-0.1 0, 0.0 4,-0.0 0, 0.0 0.420 141.1 6.4-110.9 -4.3 2.4 5.3 -1.1 5 5 A T S >> S+ 0 0 25 3,-0.0 4,-3.3 2,-0.0 3,-0.8 0.419 115.6 74.9-144.8 -35.5 2.4 2.1 0.9 6 6 A L H 3> S+ 0 0 55 1,-0.3 4,-0.6 2,-0.2 6,-0.1 0.680 95.7 59.3 -60.2 -12.5 -1.0 0.4 0.1 7 7 A L H 3> S+ 0 0 53 2,-0.2 4,-0.6 3,-0.2 -1,-0.3 0.849 108.8 40.5 -83.8 -35.4 0.7 -0.4 -3.2 8 8 A K H <4 S+ 0 0 119 -3,-0.8 3,-0.3 1,-0.2 -2,-0.2 0.854 124.5 39.7 -77.8 -31.3 3.3 -2.3 -1.4 9 9 A K H >< S+ 0 0 91 -4,-3.3 3,-2.5 1,-0.2 -2,-0.2 0.693 93.9 85.9 -85.4 -21.7 0.5 -3.6 0.8 10 10 A V H >< S+ 0 0 71 -4,-0.6 3,-3.9 -5,-0.4 -1,-0.2 0.887 75.1 69.8 -48.7 -36.4 -1.6 -3.8 -2.3 11 11 A L T 3< S+ 0 0 139 -4,-0.6 -1,-0.3 -3,-0.3 -2,-0.2 0.921 118.2 23.5 -48.3 -37.7 -0.0 -7.3 -2.7 12 12 A K T < 0 0 166 -3,-2.5 -1,-0.3 -4,-0.2 -2,-0.3 -0.103 360.0 360.0-114.8 28.1 -2.1 -8.0 0.4 13 13 A A < 0 0 110 -3,-3.9 -3,-0.2 -6,-0.1 -6,-0.1 0.656 360.0 360.0 17.9 360.0 -4.5 -5.1 -0.5