==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION/DNA 12-JUN-08 3DFV . COMPND 2 MOLECULE: TRANS-ACTING T-CELL-SPECIFIC TRANSCRIPTION . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR D.L.BATES,G.K.KIM,L.GUO,L.CHEN . 112 2 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 9018.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 43.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 7.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 2 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 11 9.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 16.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 311 D R 0 0 202 0, 0.0 2,-0.2 0, 0.0 17,-0.1 0.000 360.0 360.0 360.0-176.4 -6.3 -20.3 39.9 2 312 D R > - 0 0 118 11,-0.2 3,-0.9 3,-0.2 2,-0.5 -0.795 360.0-103.7 178.2 139.5 -9.7 -21.2 41.3 3 313 D A T 3 S+ 0 0 106 -2,-0.2 3,-0.1 1,-0.2 0, 0.0 -0.650 100.1 13.1 -83.7 119.8 -12.7 -23.0 39.7 4 314 D G T 3 S+ 0 0 87 -2,-0.5 2,-0.4 1,-0.3 -1,-0.2 0.514 98.0 113.5 99.3 6.5 -15.7 -20.8 38.7 5 315 D T < + 0 0 26 -3,-0.9 2,-0.3 8,-0.1 -1,-0.3 -0.955 36.2 175.1-119.2 128.5 -14.0 -17.5 39.1 6 316 D S - 0 0 67 -2,-0.4 2,-0.5 -3,-0.1 7,-0.2 -0.928 44.9 -90.6-127.5 148.9 -13.2 -15.0 36.2 7 317 D C > - 0 0 1 5,-2.8 4,-1.7 -2,-0.3 20,-0.2 -0.450 29.9-144.5 -64.1 113.8 -11.7 -11.5 36.4 8 318 D A T 4 S+ 0 0 48 18,-2.4 -1,-0.2 -2,-0.5 19,-0.1 0.476 95.1 19.4 -58.9 0.9 -14.7 -9.2 36.7 9 319 D N T 4 S+ 0 0 23 3,-0.1 -1,-0.2 17,-0.1 35,-0.1 0.593 134.4 29.3-135.0 -52.3 -12.7 -6.8 34.5 10 320 D a T 4 S- 0 0 2 2,-0.1 -2,-0.1 18,-0.1 3,-0.1 0.528 88.3-142.0 -90.9 -1.9 -9.9 -8.2 32.5 11 321 D Q < + 0 0 103 -4,-1.7 -3,-0.1 1,-0.2 16,-0.0 0.433 51.6 142.2 57.2 -2.9 -11.8 -11.6 32.3 12 322 D T - 0 0 30 -6,-0.2 -5,-2.8 1,-0.1 -1,-0.2 -0.189 42.1-155.8 -63.2 169.1 -8.5 -13.4 32.6 13 323 D T S S+ 0 0 56 -7,-0.2 -11,-0.2 1,-0.2 2,-0.1 -0.320 71.6 66.7-143.4 51.8 -8.6 -16.5 34.8 14 324 D T + 0 0 50 -13,-0.1 2,-0.3 3,-0.0 -1,-0.2 -0.552 55.1 149.2-171.9 95.7 -5.0 -16.9 36.0 15 325 D T - 0 0 10 1,-0.2 14,-0.3 -2,-0.1 12,-0.1 -0.835 50.4-125.3-145.8 105.6 -3.7 -14.2 38.3 16 326 D T S S+ 0 0 128 -2,-0.3 2,-0.4 1,-0.1 -1,-0.2 0.574 98.7 9.7 -4.7 -69.6 -1.1 -14.8 41.0 17 327 D L S S- 0 0 90 -3,-0.1 12,-1.1 10,-0.0 2,-0.2 -0.988 76.7-136.0-129.3 128.0 -3.4 -13.4 43.7 18 328 D W E -A 28 0A 28 -2,-0.4 10,-0.2 10,-0.2 2,-0.2 -0.590 22.8-178.0 -84.8 144.3 -7.2 -12.5 43.4 19 329 D R E -A 27 0A 64 8,-3.2 8,-2.3 -2,-0.2 2,-0.4 -0.649 23.4-111.8-124.4-178.5 -8.6 -9.3 44.9 20 330 D R E -A 26 0A 136 6,-0.2 4,-0.0 -2,-0.2 2,-0.0 -0.971 18.7-128.6-126.3 136.6 -12.1 -7.9 45.0 21 331 D N > - 0 0 41 4,-2.1 2,-3.0 -2,-0.4 3,-2.5 -0.304 48.4 -87.6 -72.4 164.0 -13.6 -4.9 43.3 22 332 D A T 3 S+ 0 0 85 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.050 130.4 58.5 -64.9 37.0 -15.5 -2.3 45.4 23 333 D N T 3 S- 0 0 124 -2,-3.0 -1,-0.3 2,-0.1 -2,-0.1 0.126 119.4-103.7-148.3 14.0 -18.5 -4.6 44.8 24 334 D G S < S+ 0 0 44 -3,-2.5 -2,-0.1 1,-0.2 -4,-0.0 0.649 77.4 138.2 67.7 15.8 -17.2 -7.9 46.3 25 335 D D - 0 0 82 -4,-0.3 -4,-2.1 1,-0.1 -1,-0.2 -0.855 59.5-105.8-103.4 118.9 -16.6 -9.2 42.8 26 336 D P E +A 20 0A 26 0, 0.0 -18,-2.4 0, 0.0 2,-0.3 0.094 41.2 178.0 -37.6 138.6 -13.4 -11.2 42.1 27 337 D V E -A 19 0A 5 -8,-2.3 -8,-3.2 -20,-0.2 2,-0.2 -0.990 32.0-107.8-151.0 140.1 -10.7 -9.5 40.1 28 338 D a E >> -A 18 0A 3 -2,-0.3 4,-1.6 -10,-0.2 3,-0.5 -0.503 43.1-102.0 -73.0 138.3 -7.2 -10.6 39.0 29 339 D N H 3> S+ 0 0 39 -12,-1.1 4,-2.1 -14,-0.3 5,-0.2 0.700 119.4 54.8 -24.2 -55.4 -4.3 -8.9 40.8 30 340 D A H >> S+ 0 0 34 2,-0.2 4,-2.8 1,-0.2 3,-0.7 0.978 114.2 39.6 -49.3 -67.3 -3.5 -6.5 38.0 31 341 D C H <> S+ 0 0 4 -3,-0.5 4,-2.8 1,-0.3 5,-0.3 0.928 110.8 55.9 -45.4 -64.3 -7.1 -5.2 37.8 32 342 D G H 3X S+ 0 0 8 -4,-1.6 4,-1.3 1,-0.2 -1,-0.3 0.831 115.9 40.6 -39.1 -41.9 -7.7 -5.1 41.5 33 343 D L H - 0 0 19 0, 0.0 3,-2.0 0, 0.0 -1,-0.1 -0.168 25.7-152.0 -43.3 103.8 -8.4 -0.4 30.5 44 354 D L G > S+ 0 0 91 1,-0.3 3,-2.1 2,-0.1 -2,-0.0 0.699 82.9 82.7 -57.7 -20.5 -8.7 -4.0 29.3 45 355 D T G 3 S+ 0 0 60 1,-0.3 -1,-0.3 2,-0.0 -35,-0.0 0.754 85.7 56.3 -57.1 -25.0 -6.7 -3.1 26.2 46 356 D M G < S+ 0 0 59 -3,-2.0 2,-0.7 2,-0.1 -1,-0.3 0.072 77.8 142.1 -93.9 24.6 -3.5 -3.4 28.1 47 357 D K < - 0 0 98 -3,-2.1 2,-0.1 -5,-0.0 -3,-0.1 -0.553 42.8-148.6 -68.6 109.2 -4.7 -6.9 28.9 48 358 D K - 0 0 144 -2,-0.7 -2,-0.1 1,-0.1 -1,-0.0 -0.433 6.0-136.6 -80.1 157.2 -1.5 -8.9 28.8 49 359 D E S S+ 0 0 179 -2,-0.1 -1,-0.1 -37,-0.0 2,-0.0 0.979 77.5 13.5 -75.3 -79.8 -1.4 -12.6 27.6 50 360 D G S S- 0 0 45 1,-0.0 2,-0.4 0, 0.0 -36,-0.0 -0.138 83.7-103.5 -87.1-171.8 0.8 -14.5 30.0 51 361 D I - 0 0 94 -2,-0.0 2,-0.2 -3,-0.0 -1,-0.0 -0.946 25.4-133.6-119.9 139.7 2.2 -13.5 33.4 52 362 D Q - 0 0 157 -2,-0.4 2,-0.1 1,-0.1 0, 0.0 -0.523 12.6-138.6 -87.6 155.3 5.8 -12.4 34.1 53 363 D T - 0 0 129 -2,-0.2 2,-0.3 1,-0.0 -1,-0.1 -0.392 23.3-157.8 -97.9-176.6 7.9 -13.6 37.0 54 364 D R - 0 0 222 -2,-0.1 2,-0.3 2,-0.0 -1,-0.0 -0.897 7.0-130.6-153.6-179.3 10.1 -11.3 39.0 55 365 D N 0 0 151 -2,-0.3 0, 0.0 1,-0.0 0, 0.0 -0.982 360.0 360.0-143.7 155.2 13.1 -11.0 41.4 56 366 D R 0 0 290 -2,-0.3 -1,-0.0 0, 0.0 -2,-0.0 -0.210 360.0 360.0-114.2 360.0 14.1 -9.5 44.7 57 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 58 311 C R 0 0 185 0, 0.0 2,-0.2 0, 0.0 13,-0.1 0.000 360.0 360.0 360.0-171.3 3.1 22.3 18.2 59 312 C R > - 0 0 123 11,-0.3 3,-0.9 3,-0.2 2,-0.7 -0.703 360.0-102.4 168.4 140.4 1.7 23.7 14.9 60 313 C A T 3 S+ 0 0 106 1,-0.2 3,-0.1 -2,-0.2 10,-0.0 -0.664 103.2 14.8 -84.0 111.5 -1.4 25.5 13.7 61 314 C G T 3 S+ 0 0 88 -2,-0.7 2,-0.4 1,-0.3 -1,-0.2 0.401 100.5 107.9 109.0 2.5 -4.0 23.4 11.8 62 315 C T < + 0 0 24 -3,-0.9 2,-0.3 8,-0.1 -1,-0.3 -0.955 38.8 175.1-119.7 129.0 -2.6 20.0 12.9 63 316 C S - 0 0 67 -2,-0.4 2,-0.5 -3,-0.1 7,-0.2 -0.929 45.0 -90.5-128.0 149.3 -4.2 17.6 15.4 64 317 C C > - 0 0 1 5,-2.8 4,-0.9 -2,-0.3 20,-0.2 -0.459 29.6-145.0 -64.3 114.0 -3.1 14.1 16.4 65 318 C A T 4 S+ 0 0 47 18,-2.4 -1,-0.2 -2,-0.5 19,-0.1 0.475 94.8 19.2 -59.0 0.0 -4.9 11.8 14.0 66 319 C N T 4 S+ 0 0 22 3,-0.1 -1,-0.2 17,-0.1 35,-0.1 0.605 136.0 26.8-134.9 -51.8 -5.1 9.4 17.0 67 320 C C T 4 S- 0 0 2 2,-0.1 -2,-0.1 18,-0.1 3,-0.1 0.555 89.3-146.1 -90.5 -14.7 -4.7 10.8 20.5 68 321 C Q < + 0 0 95 -4,-0.9 -3,-0.1 1,-0.2 16,-0.0 0.375 47.5 142.2 66.5 4.7 -5.9 14.0 19.0 69 322 C T - 0 0 29 -6,-0.2 -5,-2.8 1,-0.1 -1,-0.2 -0.053 44.0-149.6 -63.8 169.6 -3.7 16.0 21.3 70 323 C T S S+ 0 0 56 -7,-0.2 -11,-0.3 1,-0.2 2,-0.1 -0.325 73.8 67.6-144.1 51.9 -2.1 19.1 19.8 71 324 C T + 0 0 48 -13,-0.1 2,-0.3 3,-0.0 -1,-0.2 -0.560 54.6 149.4-171.0 95.8 1.2 19.5 21.6 72 325 C T - 0 0 10 1,-0.2 14,-0.3 -2,-0.1 12,-0.1 -0.837 50.5-125.0-145.6 106.0 3.8 16.8 21.0 73 326 C T S S+ 0 0 123 -2,-0.3 2,-0.4 1,-0.1 -1,-0.2 0.575 98.7 9.1 -4.8 -69.5 7.6 17.3 21.1 74 327 C L S S- 0 0 92 -3,-0.1 12,-1.1 10,-0.0 2,-0.2 -0.989 76.7-135.5-129.7 128.4 7.9 15.9 17.5 75 328 C W E -B 85 0B 29 -2,-0.4 10,-0.2 10,-0.2 2,-0.2 -0.599 23.0-177.8 -84.8 144.5 5.2 15.1 15.0 76 329 C R E -B 84 0B 68 8,-3.2 8,-2.3 -2,-0.2 2,-0.4 -0.645 23.4-111.9-124.2-178.7 5.3 11.8 13.0 77 330 C R E -B 83 0B 136 6,-0.2 4,-0.0 -2,-0.2 2,-0.0 -0.971 18.8-128.5-126.0 136.6 3.0 10.4 10.2 78 331 C N > - 0 0 40 4,-2.1 2,-3.0 -2,-0.4 3,-2.5 -0.301 48.5 -87.5 -72.3 164.4 0.7 7.4 10.3 79 332 C A T 3 S+ 0 0 83 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.049 130.5 58.4 -65.2 36.9 1.0 4.9 7.5 80 333 C N T 3 S- 0 0 123 -2,-3.0 -1,-0.3 2,-0.1 -2,-0.1 0.121 119.2-103.8-148.3 14.3 -1.4 7.1 5.7 81 334 C G S < S+ 0 0 44 -3,-2.5 -2,-0.1 1,-0.2 -4,-0.0 0.647 77.4 138.0 67.5 15.0 0.5 10.4 5.7 82 335 C D - 0 0 83 -4,-0.3 -4,-2.1 1,-0.1 -1,-0.2 -0.853 59.6-105.8-102.8 119.0 -1.7 11.7 8.5 83 336 C P E +B 77 0B 26 0, 0.0 -18,-2.4 0, 0.0 2,-0.3 0.099 41.2 177.7 -37.8 138.6 -0.0 13.7 11.3 84 337 C V E -B 76 0B 7 -8,-2.3 -8,-3.2 -20,-0.2 2,-0.2 -0.990 32.1-107.5-150.9 140.4 0.4 12.0 14.7 85 338 C C E > -B 75 0B 2 -2,-0.3 4,-1.6 -10,-0.2 3,-0.5 -0.512 43.1-101.7 -73.6 138.5 1.9 13.1 18.0 86 339 C N H > S+ 0 0 40 -12,-1.1 4,-2.2 -14,-0.3 5,-0.3 0.702 119.5 54.6 -23.4 -56.6 5.2 11.4 18.8 87 340 C A H >> S+ 0 0 35 2,-0.2 4,-2.8 1,-0.2 3,-0.8 0.972 114.2 39.7 -48.1 -69.0 3.7 9.1 21.3 88 341 C C H 3> S+ 0 0 4 -3,-0.5 4,-2.8 1,-0.3 5,-0.4 0.923 110.7 56.4 -43.3 -65.1 1.2 7.7 18.8 89 342 C G H 3X S+ 0 0 9 -4,-1.6 4,-1.2 1,-0.2 -1,-0.3 0.822 115.9 40.1 -38.1 -42.6 3.5 7.6 15.9 90 343 C L H - 0 0 19 0, 0.0 3,-1.9 0, 0.0 -1,-0.1 -0.150 24.6-148.9 -42.3 104.3 -5.2 3.0 22.8 101 354 C L G > S+ 0 0 98 1,-0.3 3,-1.7 2,-0.1 -2,-0.0 0.679 83.8 83.2 -56.8 -16.1 -6.2 6.5 23.5 102 355 C T G 3 S+ 0 0 59 1,-0.3 -1,-0.3 2,-0.0 -35,-0.0 0.736 84.0 56.8 -61.1 -24.6 -7.0 5.6 27.1 103 356 C M G < S+ 0 0 58 -3,-1.9 2,-0.7 2,-0.1 -1,-0.3 0.076 77.2 142.3 -94.2 24.4 -3.4 6.0 28.1 104 357 C K < - 0 0 101 -3,-1.7 2,-0.1 -5,-0.0 -3,-0.1 -0.552 42.9-148.2 -68.2 109.6 -3.6 9.5 26.8 105 358 C K - 0 0 147 -2,-0.7 -2,-0.1 1,-0.1 -1,-0.0 -0.438 5.7-136.4 -80.4 157.2 -1.6 11.5 29.2 106 359 C E S S+ 0 0 181 -2,-0.1 -1,-0.1 -37,-0.0 2,-0.0 0.980 77.5 12.9 -74.9 -79.9 -2.4 15.1 30.1 107 360 C G S S- 0 0 46 1,-0.0 2,-0.4 0, 0.0 -2,-0.0 -0.146 83.9-102.7 -87.6-171.4 0.8 17.1 30.1 108 361 C I - 0 0 95 -2,-0.0 2,-0.2 -3,-0.0 -1,-0.0 -0.944 25.4-133.6-119.7 139.9 4.3 16.1 28.9 109 362 C Q - 0 0 157 -2,-0.4 2,-0.1 1,-0.1 0, 0.0 -0.529 12.7-138.9 -87.7 154.8 7.3 15.0 30.9 110 363 C T - 0 0 129 -2,-0.2 2,-0.3 1,-0.0 -1,-0.1 -0.390 23.2-157.8 -97.6-176.7 10.8 16.3 30.5 111 364 C R - 0 0 219 -2,-0.1 2,-0.3 2,-0.0 -1,-0.0 -0.895 6.9-130.6-153.5-179.1 13.8 14.0 30.6 112 365 C N 0 0 153 -2,-0.3 0, 0.0 1,-0.0 0, 0.0 -0.981 360.0 360.0-143.5 155.5 17.6 13.7 31.2 113 366 C R 0 0 290 -2,-0.3 -1,-0.0 0, 0.0 -2,-0.0 -0.212 360.0 360.0-114.6 360.0 20.7 12.3 29.7