==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 29-MAR-06 2DIF . COMPND 2 MOLECULE: TRIPARTITE MOTIF PROTEIN 39; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR T.TOMIZAWA,S.KOSHIBA,M.INOUE,T.KIGAWA,S.YOKOYAMA,RIKEN . 53 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4370.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 27 50.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 17.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 17.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 126 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 145.2 -10.1 -30.5 13.3 2 2 A S - 0 0 125 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.947 360.0-176.8-171.1 150.7 -8.5 -27.1 14.0 3 3 A S + 0 0 132 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.991 12.9 165.4-153.3 154.9 -8.5 -23.5 12.7 4 4 A G + 0 0 83 -2,-0.3 2,-0.5 2,-0.0 -1,-0.0 -0.178 16.6 157.9-171.8 66.7 -6.8 -20.2 13.4 5 5 A S - 0 0 125 0, 0.0 2,-0.5 0, 0.0 -2,-0.0 -0.852 32.4-138.2-102.8 130.9 -7.1 -17.5 10.8 6 6 A S - 0 0 104 -2,-0.5 -2,-0.0 1,-0.2 3,-0.0 -0.750 17.7-170.2 -90.0 125.5 -6.6 -13.8 11.7 7 7 A G + 0 0 54 -2,-0.5 -1,-0.2 2,-0.0 0, 0.0 0.818 60.4 38.3 -77.6-106.5 -9.1 -11.4 10.2 8 8 A E S S- 0 0 146 1,-0.1 2,-0.6 9,-0.0 9,-0.0 0.043 80.6-125.5 -43.0 154.9 -8.4 -7.7 10.5 9 9 A S + 0 0 86 9,-0.1 9,-2.0 6,-0.0 2,-0.4 -0.919 35.8 167.7-115.1 109.2 -4.8 -6.6 10.2 10 10 A L B -A 17 0A 84 -2,-0.6 7,-0.2 7,-0.2 20,-0.0 -0.955 44.4 -92.1-123.3 140.3 -3.4 -4.6 13.1 11 11 A C > - 0 0 8 5,-1.5 4,-1.7 -2,-0.4 18,-0.1 -0.140 28.6-134.0 -47.9 134.5 0.2 -3.7 13.9 12 12 A P T 4 S+ 0 0 100 0, 0.0 -1,-0.2 0, 0.0 -2,-0.0 0.544 106.5 30.5 -69.8 -6.3 1.8 -6.3 16.3 13 13 A Q T 4 S+ 0 0 153 3,-0.1 -2,-0.1 0, 0.0 -3,-0.0 0.681 133.5 28.0-118.5 -41.8 3.2 -3.4 18.3 14 14 A H T 4 S- 0 0 63 2,-0.1 3,-0.1 0, 0.0 -3,-0.0 0.731 84.1-149.7 -93.5 -27.6 0.7 -0.6 17.8 15 15 A H < + 0 0 119 -4,-1.7 2,-0.4 1,-0.2 -5,-0.0 0.823 50.5 136.0 60.3 31.7 -2.3 -2.9 17.3 16 16 A E - 0 0 113 1,-0.1 -5,-1.5 0, 0.0 -1,-0.2 -0.892 69.8 -80.8-114.4 142.7 -3.8 -0.1 15.1 17 17 A A B -A 10 0A 72 -2,-0.4 2,-0.8 -7,-0.2 14,-0.4 -0.079 48.5-127.4 -39.5 120.6 -5.6 -0.6 11.7 18 18 A L + 0 0 39 -9,-2.0 12,-0.2 12,-0.2 -1,-0.1 -0.674 42.8 159.2 -80.8 109.4 -2.8 -0.9 9.1 19 19 A S + 0 0 59 -2,-0.8 28,-0.4 10,-0.2 2,-0.3 0.002 57.5 57.5-117.9 25.8 -3.4 1.7 6.4 20 20 A L E -B 29 0B 30 9,-1.0 9,-1.0 26,-0.2 2,-0.3 -0.954 58.9-154.8-149.3 166.1 0.1 1.8 5.1 21 21 A F E -BC 28 45B 42 24,-1.3 24,-1.8 -2,-0.3 2,-0.6 -0.951 14.8-137.6-151.2 126.7 2.9 -0.3 3.6 22 22 A C E >> -BC 27 44B 0 5,-2.8 4,-1.7 -2,-0.3 5,-1.1 -0.744 11.1-165.5 -87.9 120.0 6.7 0.1 3.6 23 23 A Y T 45S+ 0 0 123 20,-2.0 -1,-0.2 -2,-0.6 21,-0.1 0.994 85.4 52.4 -65.5 -64.9 8.3 -0.8 0.2 24 24 A E T 45S+ 0 0 140 19,-0.3 -1,-0.1 1,-0.3 20,-0.1 0.884 123.1 31.4 -36.0 -60.1 11.9 -1.0 1.3 25 25 A D T 45S- 0 0 61 18,-0.2 -1,-0.3 2,-0.1 -2,-0.2 0.795 100.9-141.4 -71.8 -28.9 11.0 -3.3 4.1 26 26 A Q T <5 + 0 0 126 -4,-1.7 2,-0.3 1,-0.3 -3,-0.2 0.823 60.4 117.7 70.1 31.8 8.2 -4.8 2.0 27 27 A E E < -B 22 0B 99 -5,-1.1 -5,-2.8 0, 0.0 2,-0.4 -0.909 68.8-107.4-129.6 157.3 6.0 -5.0 5.2 28 28 A A E +B 21 0B 50 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.3 -0.694 40.0 178.7 -86.9 132.0 2.7 -3.5 6.3 29 29 A V E -B 20 0B 6 -9,-1.0 -9,-1.0 -2,-0.4 -10,-0.2 -0.865 23.8-114.1-129.7 163.7 2.9 -0.9 9.0 30 30 A C > - 0 0 0 -2,-0.3 4,-1.6 -12,-0.2 -12,-0.2 -0.158 38.6 -94.9 -85.8-175.8 0.4 1.4 10.9 31 31 A L H > S+ 0 0 121 -14,-0.4 4,-1.1 2,-0.2 3,-0.3 0.979 122.4 50.2 -65.2 -58.3 0.1 5.2 10.8 32 32 A I H > S+ 0 0 75 1,-0.2 4,-0.7 2,-0.2 3,-0.4 0.892 107.7 56.3 -46.8 -46.7 2.2 5.9 13.9 33 33 A C H >> S+ 0 0 18 1,-0.2 4,-1.5 2,-0.2 3,-1.1 0.937 94.1 67.0 -52.2 -52.6 5.0 3.6 12.5 34 34 A A H 3X>S+ 0 0 11 -4,-1.6 4,-2.7 -3,-0.3 5,-0.5 0.863 90.2 64.8 -34.1 -57.2 5.1 5.7 9.3 35 35 A I H 3X5S+ 0 0 109 -4,-1.1 4,-1.2 -3,-0.4 -1,-0.3 0.870 106.2 42.3 -34.0 -60.1 6.5 8.6 11.2 36 36 A S H <>S+ 0 0 28 -4,-1.5 3,-1.6 1,-0.3 5,-1.4 0.979 110.7 52.8 -53.2 -66.9 10.0 5.2 8.5 38 38 A T H 3<5S+ 0 0 85 -4,-2.7 3,-0.4 1,-0.3 -1,-0.3 0.754 112.6 50.4 -42.1 -26.5 9.2 8.4 6.7 39 39 A H H 3<