==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 05-APR-06 2DJN . COMPND 2 MOLECULE: HOMEOBOX PROTEIN DLX-5; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR A.SASAGAWA,S.OHNISHI,N.TOCHIO,K.SAITO,S.KOSHIBA,M.INOUE, . 70 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5996.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 39 55.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 7.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 41.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 125 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -63.5 18.3 0.5 -15.7 2 2 A S + 0 0 131 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.624 360.0 6.6-125.4 -62.0 16.6 1.3 -19.0 3 3 A S S S- 0 0 124 2,-0.0 3,-0.1 0, 0.0 0, 0.0 0.896 87.4-143.7 -93.2 -55.3 13.7 3.6 -18.7 4 4 A G - 0 0 51 1,-0.1 2,-1.7 0, 0.0 0, 0.0 0.695 16.7-112.0 88.8 110.5 13.8 4.6 -15.0 5 5 A S + 0 0 137 2,-0.0 2,-0.3 0, 0.0 -1,-0.1 -0.548 62.6 144.8 -75.4 87.7 10.7 5.2 -12.9 6 6 A S + 0 0 120 -2,-1.7 2,-0.2 -3,-0.1 0, 0.0 -0.907 7.4 121.0-126.8 154.4 10.9 9.0 -12.5 7 7 A G - 0 0 78 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.742 40.0-132.1 160.7 151.2 8.3 11.7 -12.2 8 8 A R + 0 0 230 -2,-0.2 3,-0.1 0, 0.0 -2,-0.0 -0.981 33.3 151.7-129.4 122.6 6.9 14.5 -10.1 9 9 A K - 0 0 128 -2,-0.4 4,-0.1 1,-0.1 -2,-0.0 -0.998 44.7-136.4-150.0 145.1 3.2 15.1 -9.5 10 10 A P S S+ 0 0 135 0, 0.0 2,-1.4 0, 0.0 -1,-0.1 0.777 90.1 83.8 -69.7 -27.6 1.1 16.6 -6.7 11 11 A R S S- 0 0 174 2,-0.1 4,-0.1 -3,-0.1 0, 0.0 -0.631 89.4-129.2 -82.0 90.6 -1.4 13.8 -6.9 12 12 A T - 0 0 89 -2,-1.4 -1,-0.0 1,-0.2 4,-0.0 0.124 29.2 -98.0 -34.5 151.4 0.2 11.1 -4.7 13 13 A I S S+ 0 0 118 -4,-0.1 2,-0.3 1,-0.1 -1,-0.2 0.694 114.2 37.3 -50.3 -17.5 0.6 7.7 -6.4 14 14 A Y S S- 0 0 28 4,-0.0 -2,-0.1 3,-0.0 -1,-0.1 -0.996 89.5-114.1-140.0 144.0 -2.6 6.9 -4.4 15 15 A S > - 0 0 34 -2,-0.3 4,-2.8 1,-0.1 5,-0.2 -0.222 30.4-112.3 -70.6 163.9 -5.7 8.9 -3.5 16 16 A S H > S+ 0 0 97 2,-0.2 4,-2.8 1,-0.2 5,-0.2 0.877 117.6 52.6 -64.7 -38.5 -6.5 9.9 0.1 17 17 A F H > S+ 0 0 120 2,-0.2 4,-1.3 1,-0.2 -1,-0.2 0.929 114.3 40.9 -63.4 -46.8 -9.6 7.6 0.1 18 18 A Q H > S+ 0 0 40 2,-0.2 4,-2.2 1,-0.1 -2,-0.2 0.907 118.5 47.1 -68.4 -43.2 -7.5 4.6 -1.1 19 19 A L H X>S+ 0 0 32 -4,-2.8 4,-2.6 2,-0.2 5,-0.6 0.980 104.1 59.4 -62.4 -59.1 -4.6 5.4 1.2 20 20 A A H X5S+ 0 0 44 -4,-2.8 4,-2.4 1,-0.3 -1,-0.2 0.874 114.0 37.3 -34.0 -62.1 -6.6 6.0 4.3 21 21 A A H X5S+ 0 0 25 -4,-1.3 4,-1.4 -5,-0.2 -1,-0.3 0.919 117.9 52.8 -60.2 -45.7 -8.0 2.5 4.2 22 22 A L H >X5S+ 0 0 0 -4,-2.2 4,-2.7 2,-0.2 3,-1.5 0.981 114.8 37.8 -53.7 -67.2 -4.7 1.1 3.0 23 23 A Q H 3X5S+ 0 0 116 -4,-2.6 4,-2.4 1,-0.3 5,-0.2 0.874 114.3 57.6 -53.3 -40.1 -2.5 2.5 5.7 24 24 A R H 3< - 0 0 50 -2,-0.4 4,-2.7 3,-0.1 5,-0.3 0.142 40.2 -88.4 -57.8-177.6 -4.8 -13.0 3.4 34 34 A L H > S+ 0 0 118 1,-0.2 4,-1.7 2,-0.2 5,-0.2 0.981 130.4 34.7 -59.9 -60.1 -6.4 -13.9 0.1 35 35 A P H > S+ 0 0 68 0, 0.0 4,-0.8 0, 0.0 -1,-0.2 0.661 117.9 58.0 -69.8 -16.3 -9.8 -12.4 1.0 36 36 A E H > S+ 0 0 74 2,-0.2 4,-0.9 1,-0.1 -2,-0.2 0.912 107.6 42.3 -79.9 -46.6 -8.1 -9.6 2.9 37 37 A R H X S+ 0 0 55 -4,-2.7 4,-1.2 1,-0.2 3,-0.2 0.850 115.1 51.5 -68.6 -35.1 -5.9 -8.3 0.1 38 38 A A H X S+ 0 0 26 -4,-1.7 4,-3.0 -5,-0.3 5,-0.3 0.793 98.1 67.5 -71.8 -28.6 -8.8 -8.5 -2.3 39 39 A E H X S+ 0 0 103 -4,-0.8 4,-2.5 1,-0.2 5,-0.3 0.894 102.4 45.7 -58.2 -41.8 -11.0 -6.6 0.1 40 40 A L H X S+ 0 0 5 -4,-0.9 4,-2.1 -3,-0.2 6,-0.8 0.881 114.9 47.0 -69.5 -39.1 -8.9 -3.5 -0.5 41 41 A A H < S+ 0 0 12 -4,-1.2 -2,-0.2 4,-0.2 4,-0.2 0.856 119.4 40.0 -70.6 -36.1 -8.9 -4.0 -4.3 42 42 A A H < S+ 0 0 85 -4,-3.0 -2,-0.2 3,-0.2 -1,-0.2 0.809 125.7 37.0 -81.8 -32.5 -12.6 -4.6 -4.3 43 43 A S H < S+ 0 0 74 -4,-2.5 -3,-0.2 -5,-0.3 -2,-0.2 0.953 124.0 37.2 -82.9 -59.9 -13.4 -1.9 -1.8 44 44 A L S < S- 0 0 7 -4,-2.1 -3,-0.2 -5,-0.3 -2,-0.1 0.671 113.0-117.1 -67.0 -15.9 -10.9 0.8 -2.7 45 45 A G S S+ 0 0 61 -5,-0.4 -4,-0.2 1,-0.3 -3,-0.2 0.644 73.9 124.5 87.5 15.9 -11.5 -0.1 -6.3 46 46 A L - 0 0 15 -6,-0.8 2,-0.3 -8,-0.1 -1,-0.3 -0.384 58.0-109.8 -99.4 180.0 -7.9 -1.2 -6.8 47 47 A T >> - 0 0 70 -2,-0.1 4,-2.5 -3,-0.1 3,-1.9 -0.760 25.6-111.4-111.9 158.8 -6.4 -4.5 -8.1 48 48 A Q H 3> S+ 0 0 84 1,-0.3 4,-1.2 -2,-0.3 5,-0.2 0.801 120.1 59.0 -55.6 -29.5 -4.4 -7.2 -6.3 49 49 A T H 3> S+ 0 0 89 2,-0.2 4,-0.9 3,-0.2 -1,-0.3 0.731 111.0 41.2 -72.5 -22.3 -1.4 -6.1 -8.4 50 50 A Q H <> S+ 0 0 81 -3,-1.9 4,-2.0 2,-0.2 -2,-0.2 0.898 114.9 46.2 -89.7 -50.9 -1.8 -2.6 -6.9 51 51 A V H X S+ 0 0 1 -4,-2.5 4,-1.4 1,-0.2 -2,-0.2 0.741 112.7 55.8 -64.2 -22.5 -2.5 -3.4 -3.3 52 52 A K H X S+ 0 0 114 -4,-1.2 4,-2.1 -5,-0.4 -1,-0.2 0.949 108.9 42.1 -74.8 -52.1 0.3 -5.9 -3.4 53 53 A I H X S+ 0 0 86 -4,-0.9 4,-2.6 1,-0.2 5,-0.3 0.812 113.4 56.1 -64.8 -30.3 3.1 -3.5 -4.6 54 54 A W H X S+ 0 0 11 -4,-2.0 4,-1.8 2,-0.2 -1,-0.2 0.908 110.1 43.0 -68.4 -43.3 1.8 -0.9 -2.1 55 55 A F H X S+ 0 0 14 -4,-1.4 4,-1.5 2,-0.2 -2,-0.2 0.850 117.7 47.4 -71.1 -35.4 2.1 -3.3 0.9 56 56 A Q H X S+ 0 0 138 -4,-2.1 4,-1.0 2,-0.2 -2,-0.2 0.974 112.4 46.0 -69.7 -57.3 5.5 -4.5 -0.3 57 57 A N H >X S+ 0 0 100 -4,-2.6 3,-1.8 1,-0.2 4,-1.7 0.940 109.1 56.3 -50.5 -54.7 7.1 -1.1 -1.1 58 58 A K H >< S+ 0 0 49 -4,-1.8 3,-0.8 1,-0.3 -1,-0.2 0.914 97.7 61.6 -43.5 -55.5 5.8 0.4 2.2 59 59 A R H >< S+ 0 0 109 -4,-1.5 3,-0.7 1,-0.3 -1,-0.3 0.824 108.3 45.3 -41.9 -37.3 7.6 -2.3 4.2 60 60 A S H << S+ 0 0 84 -3,-1.8 -1,-0.3 -4,-1.0 -2,-0.2 0.840 120.2 39.1 -77.3 -35.2 10.8 -0.9 2.7 61 61 A K T << S+ 0 0 177 -4,-1.7 2,-0.8 -3,-0.8 -1,-0.2 -0.280 79.4 161.6-109.4 45.5 9.8 2.7 3.4 62 62 A I < - 0 0 27 -3,-0.7 6,-0.2 1,-0.2 -3,-0.1 -0.560 41.1-140.2 -71.4 108.0 8.3 2.1 6.8 63 63 A K S S+ 0 0 205 -2,-0.8 2,-0.3 2,-0.1 -1,-0.2 0.789 85.5 86.8 -35.4 -35.4 8.2 5.5 8.5 64 64 A K S S- 0 0 130 1,-0.1 4,-0.4 -3,-0.0 2,-0.3 -0.536 80.1-135.7 -74.0 132.2 9.2 3.5 11.6 65 65 A S S S+ 0 0 109 -2,-0.3 -2,-0.1 1,-0.1 -1,-0.1 -0.671 71.2 58.1 -90.6 142.7 12.9 3.0 12.0 66 66 A G S S+ 0 0 62 -2,-0.3 -1,-0.1 2,-0.2 -2,-0.0 -0.543 97.9 45.8 145.9 -76.1 14.4 -0.3 12.9 67 67 A P S S+ 0 0 101 0, 0.0 -2,-0.1 0, 0.0 -8,-0.0 0.804 92.0 97.5 -69.7 -30.5 13.5 -3.2 10.6 68 68 A S S S- 0 0 39 -4,-0.4 -2,-0.2 -6,-0.2 -8,-0.1 -0.267 78.6-116.9 -61.0 145.6 14.3 -1.1 7.5 69 69 A S 0 0 118 -9,-0.1 -3,-0.1 -4,-0.1 -1,-0.1 -0.105 360.0 360.0 -75.3 178.3 17.8 -1.6 6.0 70 70 A G 0 0 129 0, 0.0 -2,-0.0 0, 0.0 -1,-0.0 -0.588 360.0 360.0-160.9 360.0 20.5 1.1 5.8