==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 22-APR-06 2DMN . COMPND 2 MOLECULE: HOMEOBOX PROTEIN TGIF2LX; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR N.TOCHIO,S.OHNISHI,A.SASAGAWA,K.SAITO,S.KOSHIBA,M.INOUE, . 83 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7293.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 59.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 3.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 14.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 38.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 132 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 131.3 15.8 -26.8 1.9 2 2 A S + 0 0 129 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.945 360.0 141.9-133.6 154.4 12.4 -26.1 0.3 3 3 A S - 0 0 129 -2,-0.3 2,-0.3 2,-0.0 0, 0.0 -0.976 14.2-177.4-174.4 173.3 8.8 -25.9 1.4 4 4 A G - 0 0 71 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.977 13.6-132.1-170.4 178.2 5.5 -24.1 1.2 5 5 A S - 0 0 123 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.891 10.5-149.1-141.1 170.3 1.9 -23.9 2.3 6 6 A S + 0 0 125 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.907 12.2 174.1-139.0 166.0 -1.7 -23.5 0.9 7 7 A G - 0 0 51 -2,-0.3 2,-0.5 2,-0.0 -2,-0.0 -0.763 10.4-166.7-176.9 127.5 -5.0 -21.9 1.9 8 8 A K + 0 0 201 -2,-0.2 2,-0.3 2,-0.0 -2,-0.0 -0.970 29.4 135.1-125.6 119.2 -8.4 -21.4 0.3 9 9 A K - 0 0 188 -2,-0.5 2,-0.4 2,-0.1 41,-0.1 -0.944 41.4-126.7-152.0 170.6 -11.0 -19.1 1.8 10 10 A R + 0 0 234 -2,-0.3 2,-0.3 0, 0.0 -2,-0.0 -0.986 36.6 146.2-130.9 124.5 -13.5 -16.3 0.9 11 11 A K - 0 0 177 -2,-0.4 -2,-0.1 1,-0.2 3,-0.0 -0.991 37.8-121.0-153.0 155.0 -13.7 -12.9 2.5 12 12 A G S S- 0 0 55 -2,-0.3 -1,-0.2 1,-0.0 0, 0.0 0.454 70.9 -15.8 -72.4-142.5 -14.5 -9.3 1.6 13 13 A N S S- 0 0 117 1,-0.1 -1,-0.0 44,-0.0 40,-0.0 0.140 79.6 -97.4 -51.5 176.6 -12.2 -6.3 1.9 14 14 A L - 0 0 14 39,-0.1 2,-0.2 1,-0.0 -1,-0.1 -0.751 36.2 -99.6-104.4 150.9 -9.0 -6.5 4.0 15 15 A P >> - 0 0 75 0, 0.0 4,-2.6 0, 0.0 3,-1.9 -0.476 30.5-122.1 -69.7 130.6 -8.5 -5.4 7.7 16 16 A A H 3> S+ 0 0 67 1,-0.3 4,-2.8 2,-0.2 5,-0.3 0.878 112.6 58.0 -33.6 -66.7 -6.8 -2.0 8.0 17 17 A E H 34 S+ 0 0 166 1,-0.3 4,-0.5 2,-0.2 -1,-0.3 0.826 115.4 38.8 -34.9 -44.0 -4.0 -3.5 10.1 18 18 A S H X> S+ 0 0 21 -3,-1.9 3,-1.6 2,-0.2 4,-0.9 0.925 110.4 57.9 -75.9 -47.5 -3.4 -5.8 7.2 19 19 A V H >X S+ 0 0 11 -4,-2.6 4,-3.0 1,-0.3 3,-1.1 0.900 92.4 70.1 -49.0 -47.0 -4.0 -3.2 4.5 20 20 A K H 3X S+ 0 0 137 -4,-2.8 4,-2.6 1,-0.3 -1,-0.3 0.843 96.0 54.7 -39.4 -42.9 -1.3 -1.0 5.9 21 21 A I H <> S+ 0 0 42 -3,-1.6 4,-0.8 -4,-0.5 -1,-0.3 0.916 114.5 38.5 -60.1 -45.1 1.2 -3.6 4.7 22 22 A L H < S+ 0 0 112 -4,-2.4 3,-1.7 2,-0.2 4,-0.3 0.991 108.6 40.4 -71.6 -65.0 2.7 4.4 -1.9 28 28 A K H 3< S+ 0 0 117 -4,-1.2 3,-0.3 1,-0.3 -2,-0.2 0.841 129.0 35.8 -53.1 -35.1 6.4 4.1 -2.6 29 29 A H T >X S+ 0 0 63 -4,-2.3 4,-3.1 1,-0.2 3,-2.8 0.351 80.3 119.7 -99.7 3.3 5.4 2.2 -5.8 30 30 A R T <4 + 0 0 66 -3,-1.7 -1,-0.2 1,-0.3 -2,-0.1 0.784 57.5 82.6 -37.1 -33.4 2.3 4.4 -6.3 31 31 A F T 34 S- 0 0 171 -4,-0.3 -1,-0.3 -3,-0.3 -2,-0.1 0.873 121.3 -0.6 -40.4 -48.5 4.0 5.3 -9.6 32 32 A K T <4 S- 0 0 118 -3,-2.8 -2,-0.2 -6,-0.1 -1,-0.2 0.592 82.7-152.7-116.8 -23.7 2.6 2.1 -11.1 33 33 A A < + 0 0 0 -4,-3.1 -3,-0.1 -7,-0.2 -7,-0.1 0.835 58.3 120.1 50.4 35.3 0.8 0.7 -8.0 34 34 A Y - 0 0 125 -5,-0.4 -1,-0.1 -8,-0.0 21,-0.0 -0.830 47.9-161.8-135.0 96.1 1.3 -2.8 -9.5 35 35 A P - 0 0 13 0, 0.0 2,-0.3 0, 0.0 -9,-0.0 -0.157 19.1-114.6 -69.8 167.5 3.4 -5.3 -7.4 36 36 A S >> - 0 0 69 1,-0.1 4,-2.1 0, 0.0 3,-0.5 -0.751 33.1 -97.6-106.8 154.1 5.0 -8.4 -8.8 37 37 A E H 3> S+ 0 0 145 -2,-0.3 4,-1.6 1,-0.3 5,-0.1 0.764 129.9 50.0 -35.9 -30.8 4.3 -12.0 -8.1 38 38 A E H 3> S+ 0 0 133 2,-0.2 4,-2.0 3,-0.1 -1,-0.3 0.941 108.7 47.7 -76.6 -50.9 7.2 -11.6 -5.6 39 39 A E H <> S+ 0 0 60 -3,-0.5 4,-2.5 2,-0.2 5,-0.2 0.939 115.5 45.8 -55.4 -51.2 6.0 -8.5 -3.9 40 40 A K H X S+ 0 0 40 -4,-2.1 4,-3.3 1,-0.2 5,-0.3 0.976 111.7 49.1 -56.6 -61.2 2.5 -9.8 -3.4 41 41 A Q H < S+ 0 0 81 -4,-1.6 4,-0.5 -5,-0.3 -1,-0.2 0.818 112.3 52.9 -49.0 -33.3 3.6 -13.2 -2.1 42 42 A M H >X S+ 0 0 65 -4,-2.0 3,-1.0 2,-0.2 4,-0.6 0.952 112.0 41.4 -68.9 -51.3 5.8 -11.3 0.2 43 43 A L H >X>S+ 0 0 6 -4,-2.5 4,-3.1 1,-0.3 3,-1.6 0.890 103.1 68.3 -63.9 -40.4 3.1 -9.1 1.6 44 44 A S H 3X5S+ 0 0 14 -4,-3.3 4,-1.6 1,-0.3 5,-0.5 0.758 95.8 58.6 -50.8 -24.8 0.7 -12.0 1.8 45 45 A E H <45S+ 0 0 149 -3,-1.0 -1,-0.3 -4,-0.5 -2,-0.2 0.840 112.5 36.6 -74.8 -34.5 3.0 -13.3 4.5 46 46 A K H <<5S+ 0 0 134 -3,-1.6 -2,-0.2 -4,-0.6 -1,-0.1 0.860 127.5 36.0 -84.8 -40.2 2.5 -10.2 6.7 47 47 A T H <5S- 0 0 7 -4,-3.1 -3,-0.2 -28,-0.1 -2,-0.2 0.752 99.8-135.1 -83.6 -26.5 -1.1 -9.7 5.9 48 48 A N << + 0 0 147 -4,-1.6 -3,-0.2 -5,-0.5 2,-0.1 0.868 58.3 131.8 73.1 37.8 -1.9 -13.4 5.7 49 49 A L - 0 0 23 -5,-0.5 2,-0.4 -6,-0.1 -1,-0.2 -0.440 59.8 -95.3-109.8-174.9 -3.9 -13.1 2.5 50 50 A S >> - 0 0 37 -2,-0.1 4,-2.3 1,-0.1 3,-1.5 -0.894 27.9-120.2-109.6 133.9 -4.0 -14.9 -0.8 51 51 A L H 3> S+ 0 0 65 -2,-0.4 4,-1.9 1,-0.3 5,-0.3 0.815 117.5 56.3 -34.2 -42.2 -2.2 -13.7 -3.9 52 52 A L H 3> S+ 0 0 120 1,-0.2 4,-2.0 2,-0.2 -1,-0.3 0.930 109.3 43.4 -59.5 -47.8 -5.6 -13.5 -5.5 53 53 A Q H <> S+ 0 0 35 -3,-1.5 4,-3.0 2,-0.2 5,-0.2 0.894 109.5 59.7 -65.5 -41.1 -6.9 -11.2 -2.8 54 54 A I H X S+ 0 0 0 -4,-2.3 4,-1.8 2,-0.2 3,-0.3 0.972 112.5 34.6 -50.4 -69.0 -3.7 -9.1 -2.9 55 55 A S H X S+ 0 0 36 -4,-1.9 4,-2.0 1,-0.2 -1,-0.2 0.905 115.6 58.8 -54.4 -44.9 -3.9 -8.1 -6.5 56 56 A N H X S+ 0 0 75 -4,-2.0 4,-1.2 -5,-0.3 5,-0.3 0.911 105.7 48.6 -51.5 -47.5 -7.7 -7.9 -6.3 57 57 A W H X S+ 0 0 19 -4,-3.0 4,-2.9 -3,-0.3 -1,-0.2 0.894 106.5 56.9 -61.1 -41.5 -7.5 -5.3 -3.5 58 58 A F H X S+ 0 0 2 -4,-1.8 4,-2.8 -5,-0.2 -1,-0.2 0.884 99.9 61.9 -57.8 -40.4 -5.0 -3.3 -5.5 59 59 A I H >< S+ 0 0 97 -4,-2.0 3,-0.5 2,-0.2 -2,-0.2 0.970 117.5 24.4 -49.1 -72.3 -7.5 -3.1 -8.4 60 60 A N H >X S+ 0 0 88 -4,-1.2 3,-1.9 1,-0.2 4,-0.7 0.846 120.2 61.8 -64.2 -34.4 -10.3 -1.2 -6.5 61 61 A A H >X>S+ 0 0 2 -4,-2.9 4,-2.7 -5,-0.3 5,-1.5 0.842 96.6 58.6 -60.6 -34.4 -7.7 0.2 -4.1 62 62 A R H <<5S+ 0 0 31 -4,-2.8 -1,-0.3 -3,-0.5 -2,-0.2 0.470 102.9 56.1 -74.7 -0.5 -6.0 1.9 -7.0 63 63 A R H <45S+ 0 0 163 -3,-1.9 -1,-0.2 -5,-0.1 -2,-0.2 0.605 128.1 11.2-103.5 -18.6 -9.3 3.7 -7.6 64 64 A R H <<5S+ 0 0 188 -3,-0.8 4,-0.4 -4,-0.7 -2,-0.2 0.630 135.8 37.8-125.3 -43.1 -9.6 5.2 -4.1 65 65 A I T >X5S+ 0 0 31 -4,-2.7 4,-2.6 -5,-0.3 3,-1.5 0.982 115.2 48.3 -76.3 -65.5 -6.2 4.7 -2.4 66 66 A L H 3>XS+ 0 0 21 -5,-1.5 4,-3.3 1,-0.3 5,-0.5 0.893 118.9 42.5 -40.4 -52.2 -3.8 5.3 -5.3 67 67 A P H 345S+ 0 0 53 0, 0.0 4,-0.4 0, 0.0 -1,-0.3 0.717 112.8 55.1 -69.7 -21.5 -5.7 8.5 -6.2 68 68 A D H <45S+ 0 0 117 -3,-1.5 -2,-0.2 -4,-0.4 -3,-0.2 0.809 119.2 30.7 -81.1 -32.2 -6.0 9.3 -2.5 69 69 A M H <5S+ 0 0 36 -4,-2.6 -3,-0.2 -3,-0.2 -1,-0.1 0.869 129.8 36.3 -91.7 -46.2 -2.2 9.1 -1.9 70 70 A L T <5S- 0 0 51 -4,-3.3 3,-0.1 -5,-0.4 -2,-0.1 0.898 81.0-165.3 -74.0 -42.3 -0.9 10.2 -5.3 71 71 A Q < + 0 0 156 -5,-0.5 2,-1.2 -4,-0.4 -3,-0.1 0.908 19.2 169.6 55.4 45.0 -3.7 12.8 -5.9 72 72 A Q - 0 0 127 -6,-0.2 2,-2.2 1,-0.1 3,-0.2 -0.727 23.5-157.8 -92.5 91.9 -2.8 13.0 -9.6 73 73 A R + 0 0 236 -2,-1.2 -1,-0.1 1,-0.2 -2,-0.0 -0.456 23.3 166.6 -70.5 80.1 -5.7 14.9 -11.1 74 74 A R - 0 0 151 -2,-2.2 -1,-0.2 2,-0.1 0, 0.0 0.960 21.4-161.5 -60.3 -54.2 -5.2 13.7 -14.7 75 75 A N + 0 0 146 -3,-0.2 -2,-0.1 1,-0.2 -1,-0.0 0.947 35.8 142.1 69.0 50.3 -8.5 15.0 -15.9 76 76 A D - 0 0 98 2,-0.0 2,-0.9 3,-0.0 -1,-0.2 -0.790 37.4-158.3-127.1 88.8 -8.7 12.7 -19.0 77 77 A P - 0 0 115 0, 0.0 2,-0.1 0, 0.0 0, 0.0 -0.533 22.4-130.2 -69.7 103.1 -12.2 11.5 -19.7 78 78 A S - 0 0 112 -2,-0.9 -2,-0.0 1,-0.1 0, 0.0 -0.327 33.3-100.5 -56.9 124.4 -11.7 8.3 -21.9 79 79 A G - 0 0 65 -2,-0.1 -1,-0.1 1,-0.1 -3,-0.0 -0.038 42.0-109.2 -46.1 146.7 -14.0 8.6 -24.9 80 80 A P - 0 0 131 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.013 12.5-130.4 -69.8-178.6 -17.2 6.6 -24.8 81 81 A S - 0 0 111 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 0.795 17.6-160.1-103.0 -43.3 -18.1 3.5 -26.7 82 82 A S 0 0 124 1,-0.1 0, 0.0 0, 0.0 0, 0.0 0.901 360.0 360.0 60.8 42.4 -21.5 4.4 -28.2 83 83 A G 0 0 115 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 0.525 360.0 360.0-137.8 360.0 -22.3 0.7 -28.8