==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 24-APR-06 2DMP . COMPND 2 MOLECULE: ZINC FINGERS AND HOMEOBOXES PROTEIN 2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.OHNISHI,A.SASAGAWA,K.SAITO,S.KOSHIBA,M.INOUE,T.KIGAWA, . 89 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8331.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 49 55.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 4.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 34 38.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 129 0, 0.0 2,-0.3 0, 0.0 3,-0.0 0.000 360.0 360.0 360.0-174.8 -5.5 -17.4 7.1 2 2 A S - 0 0 71 1,-0.1 3,-0.1 4,-0.0 4,-0.0 -0.813 360.0-117.8-127.4 167.9 -6.4 -18.5 3.6 3 3 A S S S+ 0 0 141 -2,-0.3 2,-0.4 1,-0.2 -1,-0.1 0.890 100.2 29.6 -71.9 -40.6 -5.7 -21.5 1.4 4 4 A G S S- 0 0 45 1,-0.0 -1,-0.2 -3,-0.0 3,-0.1 -0.946 87.7-109.3-125.5 145.3 -3.9 -19.4 -1.2 5 5 A S - 0 0 104 -2,-0.4 2,-0.7 1,-0.1 -2,-0.1 -0.118 46.7 -88.4 -62.9 164.5 -1.9 -16.2 -1.0 6 6 A S + 0 0 37 46,-0.1 2,-0.3 -4,-0.0 -1,-0.1 -0.675 61.6 159.9 -81.1 112.1 -3.4 -12.9 -2.4 7 7 A G - 0 0 45 -2,-0.7 46,-0.0 46,-0.1 -3,-0.0 -0.976 39.3-108.5-136.2 149.3 -2.4 -12.6 -6.1 8 8 A A + 0 0 94 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.278 39.3 173.5 -70.4 158.5 -3.6 -10.7 -9.1 9 9 A Y - 0 0 166 2,-0.1 2,-1.2 -2,-0.0 -1,-0.0 -0.983 42.8 -86.3-164.1 154.9 -5.5 -12.4 -11.9 10 10 A P S S+ 0 0 138 0, 0.0 2,-0.3 0, 0.0 -2,-0.0 -0.520 78.8 111.4 -69.7 96.0 -7.4 -11.7 -15.2 11 11 A D - 0 0 92 -2,-1.2 2,-0.6 2,-0.0 -2,-0.1 -0.985 64.2-116.9-162.6 158.8 -10.9 -11.1 -14.0 12 12 A F - 0 0 179 -2,-0.3 0, 0.0 2,-0.0 0, 0.0 -0.903 26.5-148.4-108.5 112.3 -13.6 -8.4 -13.6 13 13 A A - 0 0 73 -2,-0.6 -2,-0.0 1,-0.1 0, 0.0 -0.623 8.4-146.2 -81.4 131.5 -14.6 -7.6 -10.0 14 14 A P S S+ 0 0 139 0, 0.0 2,-0.4 0, 0.0 -1,-0.1 0.621 83.3 74.0 -69.7 -12.8 -18.3 -6.4 -9.6 15 15 A Q S S- 0 0 138 3,-0.0 2,-0.1 0, 0.0 -2,-0.1 -0.881 81.7-130.0-107.9 134.6 -17.1 -4.2 -6.8 16 16 A K - 0 0 176 -2,-0.4 0, 0.0 1,-0.1 0, 0.0 -0.460 41.7 -81.1 -79.6 152.3 -15.2 -0.9 -7.4 17 17 A F - 0 0 196 -2,-0.1 2,-0.3 1,-0.1 -1,-0.1 -0.274 51.9-154.0 -54.1 127.9 -11.9 -0.1 -5.5 18 18 A K - 0 0 168 1,-0.1 3,-0.1 -3,-0.1 -1,-0.1 -0.715 24.1 -88.2-106.4 157.9 -12.7 1.2 -2.1 19 19 A E - 0 0 164 -2,-0.3 -1,-0.1 1,-0.2 2,-0.0 -0.219 62.5 -76.3 -61.0 151.7 -10.7 3.5 0.2 20 20 A K - 0 0 68 1,-0.1 -1,-0.2 4,-0.1 2,-0.1 -0.276 54.2-124.5 -52.5 121.2 -8.2 1.9 2.5 21 21 A T > - 0 0 84 29,-0.2 4,-2.1 -3,-0.1 5,-0.3 -0.435 16.5-116.6 -71.4 142.4 -10.1 0.4 5.4 22 22 A Q H > S+ 0 0 158 1,-0.2 4,-2.8 2,-0.2 5,-0.2 0.896 115.8 53.3 -42.4 -51.9 -9.2 1.6 8.9 23 23 A G H > S+ 0 0 36 2,-0.2 4,-2.2 1,-0.2 -1,-0.2 0.939 109.6 46.8 -51.0 -55.4 -8.2 -2.0 9.8 24 24 A Q H >> S+ 0 0 37 1,-0.2 4,-2.1 2,-0.2 3,-0.8 0.968 113.4 46.7 -51.6 -63.5 -5.8 -2.3 6.8 25 25 A V H 3X S+ 0 0 29 -4,-2.1 4,-3.3 1,-0.3 -1,-0.2 0.879 110.9 54.6 -47.0 -44.2 -4.1 1.0 7.3 26 26 A K H 3X S+ 0 0 133 -4,-2.8 4,-1.8 -5,-0.3 -1,-0.3 0.887 107.1 50.4 -58.8 -40.6 -3.7 0.1 11.0 27 27 A I H X S+ 0 0 0 -4,-2.1 4,-3.2 2,-0.2 3,-0.8 0.945 108.5 56.2 -70.6 -49.9 0.4 -1.3 7.7 29 29 A E H 3X S+ 0 0 56 -4,-3.3 4,-2.6 1,-0.3 5,-0.4 0.901 101.7 58.4 -48.2 -47.3 1.1 1.6 10.1 30 30 A D H 3X S+ 0 0 110 -4,-1.8 4,-0.6 -5,-0.2 -1,-0.3 0.885 115.1 36.3 -51.1 -42.9 2.2 -0.9 12.8 31 31 A S H XX S+ 0 0 14 -4,-0.9 4,-3.1 -3,-0.8 3,-0.6 0.960 120.6 45.0 -75.9 -55.4 4.9 -2.2 10.3 32 32 A F H 3< S+ 0 0 3 -4,-3.2 -3,-0.2 1,-0.2 -2,-0.2 0.969 106.2 58.5 -52.2 -62.9 5.8 1.0 8.7 33 33 A L H 3< S+ 0 0 100 -4,-2.6 -1,-0.2 1,-0.2 3,-0.2 0.812 115.5 39.9 -36.7 -38.8 6.1 3.0 11.9 34 34 A K H << S+ 0 0 166 -4,-0.6 2,-0.4 -3,-0.6 -1,-0.2 0.951 137.1 6.7 -78.2 -54.2 8.7 0.4 12.9 35 35 A S < - 0 0 62 -4,-3.1 -1,-0.3 1,-0.1 -2,-0.1 -0.917 58.6-156.5-137.7 109.3 10.5 0.0 9.6 36 36 A S S S+ 0 0 33 -2,-0.4 -1,-0.1 -3,-0.2 -3,-0.1 0.897 92.6 52.6 -46.8 -47.6 9.7 2.3 6.6 37 37 A F S S- 0 0 133 -5,-0.1 -1,-0.2 -3,-0.1 2,-0.0 -0.808 86.2-152.8 -98.4 102.0 11.0 -0.4 4.3 38 38 A P - 0 0 29 0, 0.0 2,-0.2 0, 0.0 -2,-0.0 -0.261 12.9-120.0 -69.7 157.9 9.3 -3.7 5.1 39 39 A T > - 0 0 91 1,-0.1 4,-2.1 -4,-0.0 5,-0.4 -0.637 29.7 -99.3 -99.5 158.4 10.9 -7.1 4.4 40 40 A Q H > S+ 0 0 130 1,-0.3 4,-2.4 -2,-0.2 5,-0.2 0.876 127.3 46.4 -37.8 -53.5 9.7 -9.9 2.2 41 41 A A H > S+ 0 0 56 2,-0.2 4,-1.5 1,-0.1 -1,-0.3 0.929 114.4 48.2 -58.0 -48.2 8.3 -11.7 5.2 42 42 A E H >> S+ 0 0 36 2,-0.2 4,-1.8 1,-0.2 3,-1.4 0.988 113.1 44.1 -56.2 -68.3 6.7 -8.5 6.5 43 43 A L H >X S+ 0 0 24 -4,-2.1 4,-2.9 1,-0.3 3,-0.6 0.897 107.1 62.1 -43.4 -50.7 5.0 -7.4 3.3 44 44 A D H 3X S+ 0 0 80 -4,-2.4 4,-1.5 -5,-0.4 -1,-0.3 0.872 109.4 41.0 -44.3 -44.6 3.8 -11.0 2.8 45 45 A R H S+ 0 0 51 -4,-2.9 5,-2.3 2,-0.2 4,-1.1 0.976 118.5 42.7 -57.6 -60.2 -0.8 -8.0 1.8 48 48 A V H <5S+ 0 0 32 -4,-1.5 -1,-0.2 -5,-0.3 -2,-0.2 0.935 120.0 44.0 -52.3 -52.4 -2.6 -11.1 3.1 49 49 A E H <5S+ 0 0 85 -4,-1.9 -2,-0.2 1,-0.2 -3,-0.2 0.984 122.1 36.0 -57.4 -63.7 -3.7 -9.4 6.3 50 50 A T H <5S- 0 0 1 -4,-3.1 -1,-0.2 -5,-0.3 -2,-0.2 0.540 110.0-127.1 -68.8 -4.9 -4.8 -6.1 4.7 51 51 A K T <5 + 0 0 128 -4,-1.1 -3,-0.2 -5,-0.3 2,-0.2 0.914 66.4 125.9 58.2 45.3 -6.0 -8.2 1.8 52 52 A L < - 0 0 12 -5,-2.3 2,-0.3 -6,-0.3 -1,-0.2 -0.698 56.9-111.3-124.8 177.6 -4.0 -6.1 -0.7 53 53 A S > - 0 0 28 -2,-0.2 4,-2.4 -3,-0.1 5,-0.3 -0.722 33.1-103.2-110.8 161.7 -1.5 -6.7 -3.4 54 54 A R H > S+ 0 0 113 -2,-0.3 4,-3.1 1,-0.2 5,-0.1 0.923 123.6 44.4 -44.9 -56.8 2.2 -5.7 -3.6 55 55 A R H > S+ 0 0 213 2,-0.2 4,-1.6 1,-0.2 -1,-0.2 0.942 109.4 57.0 -55.2 -52.0 1.4 -2.8 -5.9 56 56 A E H >> S+ 0 0 89 1,-0.2 4,-1.1 2,-0.2 3,-0.7 0.932 115.0 36.1 -44.2 -61.0 -1.5 -1.7 -3.8 57 57 A I H 3X S+ 0 0 1 -4,-2.4 4,-2.2 1,-0.2 5,-0.4 0.926 104.0 72.0 -60.8 -47.0 0.6 -1.3 -0.7 58 58 A D H 3X S+ 0 0 95 -4,-3.1 4,-2.6 -5,-0.3 -1,-0.2 0.830 100.4 48.4 -36.0 -43.4 3.6 -0.0 -2.7 59 59 A S H X S+ 0 0 115 -4,-2.7 4,-1.4 2,-0.2 3,-0.8 0.912 106.3 68.4 -75.5 -45.2 3.5 8.1 -0.0 64 64 A R H 3X S+ 0 0 64 -4,-3.2 4,-1.1 -5,-0.3 -2,-0.2 0.829 100.0 53.1 -42.4 -37.8 3.8 7.4 3.7 65 65 A R H >X S+ 0 0 104 -4,-1.9 4,-3.1 1,-0.2 3,-0.6 0.921 98.0 62.0 -66.2 -45.4 7.5 8.3 3.3 66 66 A K H S+ 0 0 118 -4,-0.8 4,-1.5 -3,-0.8 5,-0.6 0.853 103.8 51.1 -48.8 -38.4 6.7 11.7 1.7 67 67 A L H 3<5S+ 0 0 100 -4,-1.4 -1,-0.3 1,-0.2 -2,-0.2 0.869 112.0 45.8 -68.7 -37.4 4.9 12.6 4.9 68 68 A R H <<5S+ 0 0 155 -4,-1.1 -2,-0.2 -3,-0.6 -1,-0.2 0.873 106.3 59.3 -73.0 -38.6 7.9 11.6 7.0 69 69 A D H <5S- 0 0 45 -4,-3.1 -2,-0.2 -5,-0.1 -1,-0.2 0.897 85.8-158.5 -56.6 -42.8 10.3 13.4 4.7 70 70 A S T <5 - 0 0 93 -4,-1.5 -3,-0.1 -5,-0.2 -4,-0.1 0.902 69.3 -55.2 62.3 42.2 8.5 16.7 5.3 71 71 A M S