==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 26-APR-06 2DNP . COMPND 2 MOLECULE: RNA-BINDING PROTEIN 14; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR M.KUSUHARA,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, . 90 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6737.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 51 56.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 19 21.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 2.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 6.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 5.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 18 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 70 A G 0 0 123 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 173.2 -29.1 11.0 -2.8 2 71 A S - 0 0 132 2,-0.0 2,-0.3 1,-0.0 0, 0.0 -0.120 360.0-177.5 -63.8 165.2 -25.6 10.0 -1.9 3 72 A S - 0 0 120 5,-0.0 2,-0.2 0, 0.0 -1,-0.0 -0.979 20.8-161.9-163.8 153.1 -24.9 7.5 0.8 4 73 A G + 0 0 40 -2,-0.3 4,-0.2 1,-0.1 3,-0.2 -0.716 7.7 178.1-146.8 92.5 -22.0 5.8 2.7 5 74 A S S S- 0 0 133 1,-0.3 2,-0.3 -2,-0.2 -1,-0.1 0.917 78.7 -16.4 -57.6 -46.1 -22.6 2.6 4.6 6 75 A S S S+ 0 0 110 1,-0.1 -1,-0.3 3,-0.1 0, 0.0 -0.957 126.0 4.5-162.7 142.3 -18.9 2.4 5.5 7 76 A G - 0 0 47 -2,-0.3 -1,-0.1 -3,-0.2 -2,-0.1 0.943 60.9-167.2 44.4 69.4 -15.6 3.8 4.4 8 77 A N + 0 0 131 -4,-0.2 -1,-0.1 -3,-0.1 -3,-0.1 0.929 62.5 85.4 -49.2 -52.9 -17.0 6.2 1.9 9 78 A T S S- 0 0 39 1,-0.1 42,-0.2 40,-0.1 -3,-0.1 -0.005 93.4 -94.4 -48.1 156.6 -13.6 6.9 0.4 10 79 A W - 0 0 57 40,-2.4 2,-0.3 68,-0.0 -1,-0.1 -0.131 34.3-146.2 -69.7 170.9 -12.3 4.5 -2.2 11 80 A K - 0 0 75 38,-0.2 67,-2.3 2,-0.0 68,-0.8 -0.953 11.4-171.6-147.1 123.4 -10.1 1.5 -1.4 12 81 A I E -AB 48 77A 0 36,-2.4 36,-2.1 -2,-0.3 2,-0.4 -0.956 16.2-144.5-120.2 117.1 -7.4 -0.1 -3.5 13 82 A F E -AB 47 76A 62 63,-2.1 63,-2.0 -2,-0.5 2,-0.5 -0.652 15.1-166.6 -81.5 126.9 -5.8 -3.4 -2.5 14 83 A V E +AB 46 75A 0 32,-1.7 32,-1.4 -2,-0.4 61,-0.2 -0.950 10.2 177.4-119.4 115.6 -2.1 -3.7 -3.2 15 84 A G E + B 0 74A 9 59,-3.0 59,-2.2 -2,-0.5 3,-0.1 -0.506 54.8 46.1-108.1 178.6 -0.4 -7.1 -3.0 16 85 A N S S+ 0 0 84 57,-0.2 2,-0.7 1,-0.2 -1,-0.2 0.894 71.2 176.0 56.3 42.4 3.1 -8.4 -3.7 17 86 A V - 0 0 20 27,-1.6 -1,-0.2 -3,-0.2 4,-0.1 -0.714 33.5-114.6 -84.6 113.9 4.6 -5.4 -1.7 18 87 A S > - 0 0 12 -2,-0.7 3,-1.0 53,-0.2 -1,-0.1 0.014 16.4-126.5 -42.6 149.9 8.4 -5.8 -1.5 19 88 A A T 3 S+ 0 0 96 1,-0.3 -1,-0.1 50,-0.1 -2,-0.0 0.846 110.6 52.4 -70.9 -34.9 9.7 -6.3 2.1 20 89 A A T 3 S+ 0 0 62 49,-0.1 2,-0.4 2,-0.1 -1,-0.3 -0.000 87.5 118.6 -90.6 29.1 12.1 -3.4 1.8 21 90 A C < - 0 0 24 -3,-1.0 2,-0.4 -4,-0.1 3,-0.0 -0.822 53.6-147.3-100.7 134.5 9.2 -1.1 0.7 22 91 A T >> - 0 0 78 -2,-0.4 3,-2.0 1,-0.1 4,-1.0 -0.806 20.4-123.8-102.5 140.8 8.2 2.0 2.7 23 92 A S H 3> S+ 0 0 62 -2,-0.4 4,-2.3 1,-0.3 3,-0.3 0.908 110.8 64.2 -43.0 -54.8 4.6 3.3 2.9 24 93 A Q H 3> S+ 0 0 151 1,-0.2 4,-2.8 2,-0.2 -1,-0.3 0.825 100.0 56.1 -39.5 -39.3 5.8 6.7 1.7 25 94 A E H <> S+ 0 0 92 -3,-2.0 4,-2.1 2,-0.2 -1,-0.2 0.978 108.7 42.7 -59.8 -59.5 6.6 4.9 -1.6 26 95 A L H X S+ 0 0 8 -4,-1.0 4,-2.1 -3,-0.3 5,-0.3 0.938 116.3 48.9 -52.8 -52.7 3.2 3.4 -2.1 27 96 A R H X S+ 0 0 113 -4,-2.3 4,-2.7 1,-0.2 -1,-0.2 0.943 106.9 55.4 -53.2 -53.7 1.4 6.6 -1.2 28 97 A S H X S+ 0 0 60 -4,-2.8 4,-3.0 -5,-0.3 -1,-0.2 0.899 108.5 49.9 -46.6 -48.2 3.7 8.7 -3.5 29 98 A L H X S+ 0 0 28 -4,-2.1 4,-1.9 1,-0.2 5,-0.2 0.980 114.1 41.1 -55.9 -63.4 2.7 6.5 -6.4 30 99 A F H X S+ 0 0 0 -4,-2.1 4,-0.6 1,-0.2 -1,-0.2 0.771 115.5 56.2 -57.0 -25.8 -1.1 6.7 -5.8 31 100 A E H >< S+ 0 0 62 -4,-2.7 3,-0.7 -5,-0.3 -1,-0.2 0.935 105.1 47.5 -72.5 -48.4 -0.5 10.4 -5.1 32 101 A R H 3< S+ 0 0 212 -4,-3.0 -2,-0.2 1,-0.3 -1,-0.2 0.833 112.8 50.9 -62.1 -32.8 1.2 11.2 -8.4 33 102 A R H 3< S- 0 0 90 -4,-1.9 2,-0.3 1,-0.2 -1,-0.3 0.682 132.2 -50.8 -78.2 -18.7 -1.6 9.4 -10.2 34 103 A G S << S- 0 0 14 -3,-0.7 -1,-0.2 -4,-0.6 2,-0.1 -0.982 83.2 -32.0 169.3-174.5 -4.2 11.4 -8.2 35 104 A R - 0 0 148 -2,-0.3 16,-0.6 -3,-0.1 2,-0.4 -0.421 48.1-163.6 -68.8 139.3 -5.4 12.6 -4.9 36 105 A V E +C 50 0A 6 14,-0.2 14,-0.2 1,-0.2 3,-0.1 -0.906 16.3 174.0-131.1 105.0 -4.8 10.3 -1.9 37 106 A I E S+ 0 0 81 12,-0.8 2,-0.4 -2,-0.4 13,-0.2 0.979 74.7 14.4 -70.8 -59.0 -6.8 10.8 1.3 38 107 A E E +C 49 0A 99 11,-1.6 11,-3.0 2,-0.0 2,-0.3 -0.933 61.8 176.6-122.6 144.8 -5.6 7.8 3.2 39 108 A C E +C 48 0A 17 -2,-0.4 2,-0.3 9,-0.2 9,-0.2 -0.831 9.1 166.2-150.9 106.8 -2.8 5.4 2.5 40 109 A D E -C 47 0A 113 7,-2.5 7,-2.5 -2,-0.3 2,-0.4 -0.843 23.0-141.0-120.8 157.9 -1.8 2.5 4.8 41 110 A V E -C 46 0A 56 -2,-0.3 5,-0.3 5,-0.2 2,-0.2 -0.972 13.4-158.8-123.1 132.3 0.4 -0.6 4.3 42 111 A V - 0 0 40 3,-2.2 -25,-0.1 -2,-0.4 5,-0.0 -0.490 43.3 -79.0-101.1 173.0 -0.2 -4.1 5.6 43 112 A K S S- 0 0 187 1,-0.2 3,-0.0 -2,-0.2 -1,-0.0 0.869 118.7 -17.3 -31.7 -75.9 2.1 -7.0 6.2 44 113 A D S S+ 0 0 117 -28,-0.0 -27,-1.6 2,-0.0 -1,-0.2 0.708 137.2 52.9-106.7 -32.2 2.4 -8.1 2.6 45 114 A Y - 0 0 94 -30,-0.1 -3,-2.2 -29,-0.1 2,-0.3 -0.364 69.1-149.7 -97.4 179.4 -0.6 -6.3 1.1 46 115 A A E -AC 14 41A 0 -32,-1.4 -32,-1.7 -5,-0.3 2,-0.3 -0.902 7.5-142.1-144.1 171.5 -1.7 -2.6 1.3 47 116 A F E -AC 13 40A 53 -7,-2.5 -7,-2.5 -2,-0.3 2,-0.5 -0.887 15.7-177.2-145.1 109.6 -4.8 -0.4 1.3 48 117 A V E -AC 12 39A 0 -36,-2.1 -36,-2.4 -2,-0.3 2,-0.5 -0.921 9.4-158.6-111.5 129.0 -5.0 3.0 -0.4 49 118 A H E - C 0 38A 30 -11,-3.0 -11,-1.6 -2,-0.5 -12,-0.8 -0.919 13.5-177.0-109.7 121.7 -8.0 5.2 -0.3 50 119 A M E - C 0 36A 0 -2,-0.5 -40,-2.4 -14,-0.2 -14,-0.2 -0.740 23.0-148.2-113.7 162.8 -8.6 7.8 -2.9 51 120 A E S S+ 0 0 98 -16,-0.6 2,-0.4 -2,-0.3 -1,-0.1 0.915 81.2 62.7 -91.9 -63.6 -11.3 10.5 -3.4 52 121 A K > - 0 0 122 1,-0.2 4,-1.8 -17,-0.1 -1,-0.1 -0.527 66.8-157.3 -69.6 119.3 -11.6 10.9 -7.2 53 122 A E H > S+ 0 0 97 -2,-0.4 4,-1.9 2,-0.2 5,-0.3 0.944 90.4 58.0 -61.6 -50.2 -12.9 7.6 -8.7 54 123 A A H > S+ 0 0 74 1,-0.3 4,-2.2 2,-0.2 -1,-0.2 0.913 110.0 43.6 -45.5 -53.0 -11.6 8.4 -12.2 55 124 A D H > S+ 0 0 52 2,-0.2 4,-2.4 1,-0.2 -1,-0.3 0.867 107.9 62.7 -62.6 -37.3 -8.0 8.8 -10.8 56 125 A A H X S+ 0 0 0 -4,-1.8 4,-2.0 2,-0.2 3,-0.3 0.970 110.3 35.2 -51.5 -65.0 -8.5 5.7 -8.7 57 126 A K H X S+ 0 0 70 -4,-1.9 4,-1.9 1,-0.2 5,-0.2 0.951 112.5 60.4 -55.9 -53.7 -9.0 3.3 -11.6 58 127 A A H X S+ 0 0 55 -4,-2.2 4,-1.8 -5,-0.3 -1,-0.2 0.867 108.3 46.3 -41.3 -46.5 -6.5 5.2 -13.8 59 128 A A H X S+ 0 0 0 -4,-2.4 4,-2.0 -3,-0.3 5,-0.4 0.974 104.8 57.1 -63.0 -57.3 -3.8 4.4 -11.2 60 129 A I H X S+ 0 0 21 -4,-2.0 4,-2.4 1,-0.3 15,-0.2 0.789 110.1 49.6 -44.8 -30.5 -4.7 0.8 -10.7 61 130 A A H < S+ 0 0 71 -4,-1.9 -1,-0.3 2,-0.2 -2,-0.2 0.915 116.1 38.0 -76.7 -45.9 -4.1 0.5 -14.5 62 131 A Q H < S+ 0 0 133 -4,-1.8 -2,-0.2 -3,-0.3 -1,-0.2 0.477 128.7 38.2 -83.4 -2.9 -0.7 2.3 -14.5 63 132 A L H >< S+ 0 0 0 -4,-2.0 3,-2.0 -5,-0.2 2,-0.4 0.761 83.9 99.1-111.0 -49.6 0.1 0.6 -11.2 64 133 A N T 3< S+ 0 0 87 -4,-2.4 10,-0.2 -5,-0.4 3,-0.1 -0.190 108.8 3.5 -45.9 97.1 -1.3 -2.9 -11.5 65 134 A G T 3 S+ 0 0 27 8,-2.3 -1,-0.3 -2,-0.4 3,-0.1 -0.125 88.7 148.9 114.6 -36.6 2.0 -4.7 -12.4 66 135 A K < - 0 0 95 -3,-2.0 7,-1.6 6,-0.2 2,-0.5 0.006 55.0-114.8 -34.2 123.7 4.4 -1.8 -12.2 67 136 A E E -D 72 0B 138 5,-0.2 2,-0.4 -3,-0.1 5,-0.3 -0.554 41.0-179.5 -71.6 118.6 7.7 -3.2 -11.1 68 137 A V E > -D 71 0B 15 3,-2.4 3,-2.4 -2,-0.5 -50,-0.2 -0.981 64.5 -14.7-125.8 129.3 8.6 -1.9 -7.6 69 138 A K T 3 S- 0 0 117 -2,-0.4 -49,-0.1 1,-0.3 -1,-0.1 0.825 126.4 -58.6 51.8 33.4 11.7 -2.7 -5.7 70 139 A G T 3 S+ 0 0 59 1,-0.2 2,-0.5 -52,-0.1 -1,-0.3 0.155 125.3 99.5 84.7 -21.0 12.3 -5.5 -8.1 71 140 A K E < S-D 68 0B 99 -3,-2.4 -3,-2.4 -4,-0.0 2,-0.7 -0.872 76.0-127.5-104.4 129.2 8.9 -7.0 -7.2 72 141 A R E -D 67 0B 166 -2,-0.5 -5,-0.2 -5,-0.3 -6,-0.2 -0.631 26.4-142.2 -77.0 111.4 5.9 -6.4 -9.4 73 142 A I - 0 0 3 -7,-1.6 -8,-2.3 -2,-0.7 2,-0.7 -0.463 4.7-139.2 -74.6 144.5 3.1 -5.1 -7.2 74 143 A N E -B 15 0A 78 -59,-2.2 -59,-3.0 -10,-0.2 2,-0.4 -0.887 22.0-175.0-110.1 105.0 -0.5 -6.2 -7.8 75 144 A V E +B 14 0A 2 -2,-0.7 2,-0.3 -15,-0.2 -61,-0.2 -0.802 11.2 157.9-101.4 139.9 -3.0 -3.4 -7.5 76 145 A E E -B 13 0A 116 -63,-2.0 -63,-2.1 -2,-0.4 2,-0.2 -0.975 48.5 -89.5-159.8 144.5 -6.8 -4.0 -7.8 77 146 A L E -B 12 0A 56 -2,-0.3 -65,-0.2 -65,-0.2 -20,-0.0 -0.360 30.9-156.8 -58.1 120.9 -10.0 -2.3 -6.8 78 147 A S S S+ 0 0 44 -67,-2.3 -66,-0.2 -2,-0.2 2,-0.2 0.954 71.7 84.5 -64.9 -51.8 -10.9 -3.5 -3.3 79 148 A T + 0 0 67 -68,-0.8 -2,-0.0 1,-0.2 -68,-0.0 -0.343 51.7 175.5 -57.1 120.7 -14.6 -2.7 -3.6 80 149 A K + 0 0 192 -2,-0.2 2,-0.2 2,-0.0 -1,-0.2 0.847 57.0 72.5 -94.9 -44.8 -16.3 -5.6 -5.4 81 150 A G - 0 0 49 2,-0.0 2,-0.4 1,-0.0 0, 0.0 -0.475 67.7-154.8 -75.5 143.7 -19.9 -4.5 -5.2 82 151 A Q - 0 0 156 -2,-0.2 2,-0.4 2,-0.0 -2,-0.0 -0.971 12.1-171.6-123.6 133.7 -21.1 -1.7 -7.5 83 152 A K + 0 0 182 -2,-0.4 2,-1.3 2,-0.0 -2,-0.0 -0.739 9.5 173.3-124.9 83.1 -24.1 0.6 -6.8 84 153 A K - 0 0 161 -2,-0.4 2,-0.1 2,-0.0 -2,-0.0 -0.693 17.1-164.4 -92.6 86.4 -24.7 2.8 -9.9 85 154 A S + 0 0 93 -2,-1.3 -2,-0.0 0, 0.0 0, 0.0 -0.381 49.7 30.0 -70.5 147.4 -27.9 4.6 -9.0 86 155 A G S S- 0 0 58 -2,-0.1 -2,-0.0 2,-0.0 0, 0.0 -0.027 95.3 -58.6 89.9 163.2 -29.9 6.3 -11.8 87 156 A P - 0 0 131 0, 0.0 2,-0.3 0, 0.0 0, 0.0 -0.005 61.3 -88.1 -69.7-180.0 -30.2 5.6 -15.5 88 157 A S - 0 0 110 1,-0.1 -2,-0.0 2,-0.0 -4,-0.0 -0.700 44.3-100.4 -95.8 146.4 -27.4 5.4 -18.0 89 158 A S 0 0 129 -2,-0.3 -1,-0.1 1,-0.1 0, 0.0 -0.276 360.0 360.0 -62.3 146.7 -26.1 8.5 -19.9 90 159 A G 0 0 127 0, 0.0 -1,-0.1 0, 0.0 -2,-0.0 0.507 360.0 360.0-131.3 360.0 -27.3 8.9 -23.5