==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 21-DEC-06 2E5H . COMPND 2 MOLECULE: ZINC FINGER CCHC-TYPE AND RNA-BINDING MOTIF- . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.IIBUCHI,K.TSUDA,Y.MUTO,M.INOUE,T.KIGAWA,T.TERADA, . 94 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6371.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 60 63.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 20 21.3 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 12.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 16.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -6 A G 0 0 134 0, 0.0 2,-0.7 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-136.4 10.7 2.4 -22.9 2 -5 A S - 0 0 126 1,-0.2 3,-0.0 2,-0.0 0, 0.0 -0.871 360.0-172.5-102.6 114.1 12.2 4.2 -19.9 3 -4 A S - 0 0 131 -2,-0.7 -1,-0.2 1,-0.1 3,-0.2 0.944 29.0-138.7 -67.4 -49.7 9.9 4.4 -16.9 4 -3 A G - 0 0 55 1,-0.2 -1,-0.1 2,-0.1 -2,-0.0 -0.389 17.8-167.2 122.5 -55.7 12.2 6.6 -14.9 5 -2 A S + 0 0 120 1,-0.1 3,-0.2 2,-0.0 -1,-0.2 0.814 24.4 162.9 34.5 41.6 12.0 5.2 -11.4 6 -1 A S + 0 0 108 1,-0.2 -1,-0.1 -3,-0.2 -2,-0.1 0.900 11.1 153.1 -53.5 -44.4 13.7 8.5 -10.4 7 0 A G + 0 0 50 1,-0.2 -1,-0.2 2,-0.1 38,-0.0 -0.255 12.2 140.1 52.1-123.7 12.7 7.9 -6.8 8 1 A M + 0 0 192 -3,-0.2 -1,-0.2 1,-0.1 -2,-0.1 0.865 36.4 121.7 53.4 38.6 15.1 9.7 -4.5 9 2 A S + 0 0 66 35,-0.1 -1,-0.1 0, 0.0 -2,-0.1 -0.182 34.6 155.4-122.5 39.0 12.2 10.7 -2.3 10 3 A G + 0 0 52 1,-0.1 35,-0.0 2,-0.0 -3,-0.0 0.091 36.9 74.7 -57.3 177.1 13.3 9.2 1.0 11 4 A G S S- 0 0 74 1,-0.0 -1,-0.1 2,-0.0 0, 0.0 0.902 71.3-154.9 81.7 44.1 12.1 10.4 4.3 12 5 A L - 0 0 81 1,-0.1 -2,-0.0 2,-0.1 34,-0.0 0.038 13.5-168.0 -46.0 159.4 8.6 9.1 4.3 13 6 A A - 0 0 42 2,-0.1 5,-0.3 0, 0.0 -1,-0.1 -0.982 38.6-107.7-152.2 160.3 6.0 10.9 6.4 14 7 A P + 0 0 89 0, 0.0 6,-0.1 0, 0.0 -2,-0.1 0.412 65.1 153.0 -69.8 4.2 2.4 10.5 7.7 15 8 A S > - 0 0 74 1,-0.1 3,-0.9 2,-0.1 78,-0.2 0.118 66.4 -95.1 -33.8 148.6 1.4 13.2 5.1 16 9 A K T 3 S+ 0 0 96 1,-0.3 77,-0.3 76,-0.1 -1,-0.1 0.868 124.2 65.0 -35.0 -56.3 -2.2 13.0 4.0 17 10 A S T 3 S+ 0 0 20 49,-0.1 -1,-0.3 75,-0.1 49,-0.1 0.877 81.7 93.4 -34.1 -63.0 -1.1 10.9 1.0 18 11 A T S < S- 0 0 2 -3,-0.9 75,-0.6 -5,-0.3 2,-0.5 0.081 71.1-143.5 -34.6 143.4 0.1 8.1 3.2 19 12 A V E -AB 63 92A 0 44,-2.4 44,-2.3 73,-0.2 2,-0.9 -0.964 4.3-138.4-123.5 118.3 -2.6 5.4 3.7 20 13 A Y E +AB 62 91A 92 71,-2.7 71,-1.8 -2,-0.5 2,-0.5 -0.623 30.3 177.7 -76.9 106.1 -3.0 3.6 7.0 21 14 A V E +AB 61 90A 0 40,-2.2 40,-3.3 -2,-0.9 2,-0.3 -0.940 2.5 178.0-115.5 130.8 -3.7 -0.0 6.2 22 15 A S E + B 0 89A 24 67,-2.2 67,-1.0 -2,-0.5 37,-0.2 -0.797 57.1 39.7-125.3 167.8 -4.1 -2.8 8.8 23 16 A N S S+ 0 0 72 35,-0.6 36,-0.2 -2,-0.3 60,-0.2 0.837 78.1 161.5 63.3 33.3 -4.8 -6.5 8.7 24 17 A L - 0 0 8 -3,-0.2 2,-1.8 34,-0.1 -1,-0.2 -0.615 52.0-104.2 -88.3 145.8 -2.5 -6.9 5.7 25 18 A P > - 0 0 5 0, 0.0 3,-3.0 0, 0.0 -1,-0.1 -0.473 32.3-170.8 -69.8 84.4 -1.1 -10.3 4.7 26 19 A F T 3 S+ 0 0 123 -2,-1.8 -2,-0.0 1,-0.3 31,-0.0 0.776 74.7 86.4 -46.9 -27.8 2.5 -9.8 6.0 27 20 A S T 3 S+ 0 0 101 -3,-0.1 -1,-0.3 2,-0.0 -3,-0.0 0.781 83.5 71.2 -45.2 -29.0 3.2 -13.1 4.1 28 21 A L S < S- 0 0 42 -3,-3.0 2,-0.3 1,-0.1 3,-0.0 -0.081 84.2-120.1 -79.5-175.8 3.7 -10.8 1.1 29 22 A T >> - 0 0 75 1,-0.1 4,-1.5 0, 0.0 3,-0.7 -0.888 31.4 -94.4-128.6 159.5 6.6 -8.4 0.6 30 23 A N H 3> S+ 0 0 81 -2,-0.3 4,-2.9 1,-0.3 5,-0.2 0.850 126.5 54.1 -35.0 -50.1 7.0 -4.7 0.0 31 24 A N H 3> S+ 0 0 88 2,-0.2 4,-1.8 1,-0.2 -1,-0.3 0.940 105.0 53.2 -53.0 -52.9 6.9 -5.3 -3.7 32 25 A D H X> S+ 0 0 64 -3,-0.7 4,-3.2 1,-0.2 3,-0.8 0.951 113.2 41.5 -47.1 -63.4 3.6 -7.2 -3.4 33 26 A L H 3X S+ 0 0 11 -4,-1.5 4,-3.0 1,-0.3 5,-0.5 0.935 106.2 63.7 -51.5 -52.6 1.9 -4.4 -1.6 34 27 A Y H 3< S+ 0 0 79 -4,-2.9 4,-0.3 -5,-0.3 -1,-0.3 0.849 115.5 32.6 -40.0 -43.5 3.4 -1.8 -3.8 35 28 A R H XX S+ 0 0 165 -4,-1.8 3,-1.2 -3,-0.8 4,-0.9 0.930 111.6 60.6 -81.3 -50.9 1.5 -3.4 -6.7 36 29 A I H 3< S+ 0 0 47 -4,-3.2 3,-0.3 1,-0.3 -2,-0.2 0.826 115.6 37.6 -45.5 -35.7 -1.6 -4.5 -4.8 37 30 A F T >X S+ 0 0 3 -4,-3.0 4,-1.7 -5,-0.2 3,-1.6 0.626 99.7 77.2 -91.3 -16.6 -2.1 -0.8 -4.0 38 31 A S T <4 S+ 0 0 52 -3,-1.2 -2,-0.2 -5,-0.5 -1,-0.2 0.643 77.9 76.5 -67.4 -13.4 -0.9 0.3 -7.5 39 32 A K T 3< S+ 0 0 153 -4,-0.9 -1,-0.3 -3,-0.3 -2,-0.1 0.743 106.8 30.3 -68.8 -23.0 -4.3 -0.8 -8.7 40 33 A Y T <4 S- 0 0 55 -3,-1.6 2,-0.3 1,-0.4 -2,-0.2 0.851 133.0 -10.9-100.1 -54.1 -5.8 2.4 -7.2 41 34 A G S < S- 0 0 6 -4,-1.7 -1,-0.4 30,-0.1 2,-0.1 -0.962 79.0 -79.8-147.1 163.4 -3.0 4.9 -7.4 42 35 A K - 0 0 132 -2,-0.3 24,-1.3 -3,-0.1 2,-0.4 -0.405 44.1-145.0 -65.7 135.3 0.7 5.3 -8.1 43 36 A V E +C 65 0A 2 22,-0.2 22,-0.2 -9,-0.2 3,-0.1 -0.859 23.0 176.6-107.0 138.1 3.0 4.3 -5.2 44 37 A V E S+ 0 0 47 20,-1.9 2,-0.3 -2,-0.4 21,-0.1 0.799 71.3 5.2-103.1 -44.4 6.2 6.0 -4.4 45 38 A K E -C 64 0A 97 19,-1.0 19,-2.1 -38,-0.0 2,-0.6 -0.998 60.8-140.8-145.1 146.2 7.3 4.3 -1.1 46 39 A V E -C 63 0A 25 -2,-0.3 2,-0.3 17,-0.2 17,-0.2 -0.929 20.0-170.4-112.9 116.1 6.0 1.4 0.9 47 40 A T E -C 62 0A 31 15,-2.8 15,-1.8 -2,-0.6 2,-0.4 -0.820 1.3-170.9-106.4 144.3 6.2 1.7 4.7 48 41 A I E -C 61 0A 31 -2,-0.3 13,-0.2 13,-0.3 2,-0.1 -0.997 17.0-130.3-136.6 138.9 5.5 -1.1 7.2 49 42 A M - 0 0 74 11,-2.3 2,-0.3 -2,-0.4 10,-0.1 -0.452 21.3-163.6 -83.7 158.2 5.1 -1.1 11.0 50 43 A K - 0 0 135 -2,-0.1 7,-0.2 8,-0.1 2,-0.0 -0.999 12.9-129.0-145.6 141.4 7.0 -3.5 13.3 51 44 A D - 0 0 58 5,-1.5 7,-0.0 -2,-0.3 6,-0.0 -0.256 12.4-134.9 -81.5 172.6 6.5 -4.5 17.0 52 45 A K S S+ 0 0 179 3,-0.1 -1,-0.1 2,-0.0 0, 0.0 0.882 97.3 26.5 -93.8 -51.9 9.2 -4.5 19.7 53 46 A D S S+ 0 0 145 1,-0.1 -2,-0.0 3,-0.0 0, 0.0 0.986 133.8 30.1 -74.6 -73.9 8.7 -7.9 21.3 54 47 A T S S- 0 0 77 1,-0.1 -1,-0.1 2,-0.1 3,-0.1 0.884 91.6-150.3 -53.9 -41.7 7.2 -10.1 18.6 55 48 A R + 0 0 189 1,-0.2 2,-0.3 2,-0.1 -3,-0.1 0.922 47.3 130.7 68.9 45.6 9.0 -8.1 16.0 56 49 A K - 0 0 130 1,-0.1 -5,-1.5 2,-0.0 -1,-0.2 -0.852 67.8-121.4-127.3 163.2 6.4 -8.7 13.3 57 50 A S > - 0 0 23 -2,-0.3 3,-0.5 -7,-0.2 -8,-0.2 0.926 29.5-161.3 -68.4 -46.1 4.4 -6.5 10.8 58 51 A K T 3 - 0 0 96 1,-0.3 2,-0.8 -36,-0.1 -35,-0.6 0.762 62.3 -75.6 68.1 25.0 1.0 -7.5 12.2 59 52 A G T 3 S+ 0 0 1 1,-0.2 2,-0.5 -36,-0.2 -1,-0.3 -0.060 100.0 131.5 79.7 -37.5 -0.5 -6.3 9.0 60 53 A V < + 0 0 25 -2,-0.8 -11,-2.3 -3,-0.5 2,-0.3 -0.302 31.7 155.1 -52.8 102.5 -0.1 -2.7 10.1 61 54 A A E -AC 21 48A 1 -40,-3.3 -40,-2.2 -2,-0.5 2,-0.5 -0.992 36.8-140.6-137.4 143.9 1.5 -1.2 7.0 62 55 A F E -AC 20 47A 24 -15,-1.8 -15,-2.8 -2,-0.3 2,-0.6 -0.903 12.6-155.8-108.0 126.5 1.6 2.4 5.7 63 56 A I E -AC 19 46A 0 -44,-2.3 -44,-2.4 -2,-0.5 2,-0.6 -0.886 6.3-149.8-104.6 122.2 1.3 3.0 1.9 64 57 A L E - C 0 45A 22 -19,-2.1 -20,-1.9 -2,-0.6 -19,-1.0 -0.802 18.2-170.4 -93.7 118.1 2.8 6.2 0.5 65 58 A F E - C 0 43A 2 -2,-0.6 -22,-0.2 -22,-0.2 -47,-0.2 -0.493 27.4-129.1-100.8 172.4 1.0 7.5 -2.5 66 59 A L S S+ 0 0 126 -24,-1.3 2,-0.5 1,-0.3 -49,-0.1 0.899 94.4 28.2 -86.6 -47.9 1.8 10.3 -5.0 67 60 A D >> - 0 0 62 -25,-0.3 4,-1.7 1,-0.1 3,-1.5 -0.970 69.5-141.6-121.8 123.8 -1.4 12.3 -4.9 68 61 A K H 3> S+ 0 0 81 -2,-0.5 4,-2.6 1,-0.3 3,-0.2 0.891 104.0 61.6 -44.4 -48.4 -3.7 12.3 -1.9 69 62 A D H 3> S+ 0 0 100 1,-0.3 4,-1.3 2,-0.2 -1,-0.3 0.869 105.6 47.3 -47.5 -41.9 -6.7 12.2 -4.2 70 63 A S H <> S+ 0 0 43 -3,-1.5 4,-1.1 2,-0.2 -1,-0.3 0.881 109.1 54.1 -69.1 -39.3 -5.4 8.9 -5.5 71 64 A A H >X S+ 0 0 0 -4,-1.7 4,-2.4 -3,-0.2 3,-0.9 0.948 101.2 58.3 -59.9 -51.6 -4.9 7.6 -1.9 72 65 A Q H 3X S+ 0 0 95 -4,-2.6 4,-1.1 1,-0.3 5,-0.3 0.915 98.9 58.8 -43.6 -56.2 -8.5 8.3 -0.9 73 66 A N H >X S+ 0 0 76 -4,-1.3 4,-1.5 1,-0.3 3,-0.7 0.875 110.9 42.7 -41.8 -47.3 -9.9 6.1 -3.6 74 67 A C H S+ 0 0 0 -4,-1.1 4,-2.4 -3,-0.9 5,-0.8 0.905 107.3 59.0 -68.3 -42.8 -7.9 3.2 -2.1 75 68 A T H 3<5S+ 0 0 15 -4,-2.4 15,-0.2 1,-0.2 -1,-0.2 0.613 118.3 34.2 -62.5 -10.3 -8.8 4.2 1.5 76 69 A R H <<5S+ 0 0 181 -4,-1.1 -1,-0.2 -3,-0.7 -2,-0.2 0.552 114.4 57.1-117.1 -19.1 -12.4 3.7 0.3 77 70 A A H <5S+ 0 0 22 -4,-1.5 -3,-0.2 -5,-0.3 -2,-0.2 0.920 122.8 22.7 -79.2 -47.7 -11.9 0.8 -2.1 78 71 A I T ><5S+ 0 0 6 -4,-2.4 3,-0.5 -5,-0.1 10,-0.2 0.734 98.8 110.2 -90.2 -26.6 -10.3 -1.6 0.3 79 72 A N T 3 -D 86 0B 42 3,-1.8 3,-1.5 -2,-0.5 -2,-0.0 -0.956 66.0 -3.4-131.9 150.4 -8.7 -9.6 1.4 84 77 A F T 3 S- 0 0 115 -2,-0.3 -1,-0.1 1,-0.3 3,-0.1 0.765 131.6 -57.7 41.2 27.9 -6.4 -12.6 1.5 85 78 A G T 3 S+ 0 0 78 1,-0.1 -1,-0.3 -60,-0.0 2,-0.2 0.914 121.2 97.5 72.3 43.9 -8.9 -13.9 3.9 86 79 A R E < S-D 83 0B 88 -3,-1.5 -3,-1.8 -61,-0.0 2,-0.2 -0.814 79.3-111.6-165.7 120.0 -8.7 -11.1 6.4 87 80 A V E -D 82 0B 66 -2,-0.2 2,-0.4 -5,-0.2 -5,-0.3 -0.339 37.8-154.9 -55.6 114.9 -10.8 -7.9 6.9 88 81 A I E -D 81 0B 1 -7,-1.5 -7,-1.1 -10,-0.2 -8,-0.6 -0.794 3.7-154.6 -98.8 136.6 -8.5 -5.0 5.9 89 82 A K E -B 22 0A 93 -67,-1.0 -67,-2.2 -2,-0.4 2,-0.4 -0.934 8.3-167.9-113.7 129.6 -9.0 -1.5 7.3 90 83 A A E +B 21 0A 2 -2,-0.5 2,-0.3 -15,-0.2 -69,-0.2 -0.926 14.2 158.0-118.3 140.9 -7.9 1.6 5.5 91 84 A S E -B 20 0A 74 -71,-1.8 -71,-2.7 -2,-0.4 2,-0.5 -0.946 47.3 -99.7-161.6 137.6 -7.7 5.1 6.8 92 85 A I E -B 19 0A 48 -2,-0.3 2,-1.5 -73,-0.2 -73,-0.2 -0.432 38.5-130.0 -61.9 111.9 -5.8 8.3 6.0 93 86 A A 0 0 12 -75,-0.6 -1,-0.1 -2,-0.5 -75,-0.1 -0.478 360.0 360.0 -67.4 91.0 -2.9 8.5 8.4 94 87 A I 0 0 143 -2,-1.5 -79,-0.1 -74,-0.0 -74,-0.0 -0.973 360.0 360.0-149.0 360.0 -3.4 12.1 9.7