==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 22-DEC-06 2E5N . COMPND 2 MOLECULE: RNA POLYMERASE II ELONGATION FACTOR ELL2; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 100 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 7137.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 77 77.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 7.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 20 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 41 41.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 0 0 0 0 2 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 137 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 99.1 6.8 27.0 13.7 2 2 A S - 0 0 128 1,-0.1 3,-0.1 3,-0.0 0, 0.0 -0.198 360.0-143.0 -73.7 169.3 9.2 24.1 13.3 3 3 A S - 0 0 133 1,-0.4 2,-0.3 0, 0.0 -1,-0.1 0.866 60.3 -50.5 -98.6 -56.3 12.1 24.0 10.9 4 4 A G - 0 0 61 2,-0.0 -1,-0.4 0, 0.0 2,-0.3 -0.981 44.6-157.3-171.0 176.0 12.3 20.5 9.6 5 5 A S - 0 0 121 -2,-0.3 2,-1.0 -3,-0.1 -3,-0.0 -0.959 35.5 -90.3-158.7 171.9 12.4 16.8 10.4 6 6 A S - 0 0 86 -2,-0.3 2,-1.1 2,-0.0 -2,-0.0 -0.782 38.0-173.9 -96.4 97.5 13.4 13.3 9.1 7 7 A G + 0 0 73 -2,-1.0 2,-0.3 3,-0.0 3,-0.0 -0.743 12.9 171.9 -95.6 93.5 10.5 11.9 7.2 8 8 A T - 0 0 58 -2,-1.1 4,-0.5 1,-0.1 3,-0.1 -0.701 39.8-129.0-101.0 153.3 11.4 8.3 6.2 9 9 A I S > S+ 0 0 32 -2,-0.3 3,-2.1 1,-0.2 8,-0.1 0.910 107.5 60.3 -64.2 -43.6 9.1 5.7 4.7 10 10 A S T 3 S+ 0 0 86 1,-0.3 -1,-0.2 29,-0.1 4,-0.1 0.890 95.4 62.3 -51.2 -43.6 10.1 3.1 7.3 11 11 A Q T 3 S+ 0 0 138 -3,-0.1 -1,-0.3 2,-0.1 -2,-0.2 0.757 93.4 85.5 -55.2 -24.4 8.7 5.4 10.0 12 12 A R S < S- 0 0 97 -3,-2.1 2,-0.2 -4,-0.5 -3,-0.0 -0.460 94.9 -96.0 -80.4 152.3 5.4 5.0 8.3 13 13 A P > - 0 0 59 0, 0.0 4,-1.9 0, 0.0 5,-0.2 -0.453 27.6-125.1 -69.7 134.8 3.0 2.1 9.1 14 14 A Y H > S+ 0 0 15 1,-0.2 4,-2.4 2,-0.2 5,-0.1 0.920 107.7 59.7 -41.8 -61.0 3.3 -0.9 6.7 15 15 A R H >> S+ 0 0 120 1,-0.2 4,-2.5 2,-0.2 3,-0.9 0.877 106.0 46.8 -33.5 -66.9 -0.5 -0.8 6.0 16 16 A D H 3> S+ 0 0 12 1,-0.3 4,-3.3 2,-0.2 5,-0.3 0.921 110.4 52.4 -43.7 -57.5 -0.2 2.8 4.6 17 17 A R H 3< S+ 0 0 17 -4,-1.9 4,-0.5 1,-0.2 -1,-0.3 0.846 114.4 45.8 -49.5 -37.1 2.8 1.9 2.5 18 18 A V H XX S+ 0 0 0 -4,-2.4 3,-2.4 -3,-0.9 4,-2.3 0.992 114.2 42.6 -70.6 -65.5 0.8 -1.0 1.1 19 19 A I H 3X S+ 0 0 0 -4,-2.5 4,-2.7 1,-0.3 -2,-0.2 0.883 107.3 63.3 -48.4 -43.9 -2.5 0.7 0.3 20 20 A H H 3X S+ 0 0 0 -4,-3.3 4,-0.6 -5,-0.3 -1,-0.3 0.782 110.9 39.8 -53.2 -27.5 -0.6 3.6 -1.1 21 21 A L H <> S+ 0 0 28 -3,-2.4 4,-1.1 -4,-0.5 -2,-0.2 0.890 113.9 49.4 -88.4 -47.5 0.7 1.1 -3.7 22 22 A L H < S+ 0 0 1 -4,-2.3 46,-0.8 1,-0.2 -2,-0.2 0.738 100.0 73.8 -64.2 -22.2 -2.5 -0.8 -4.3 23 23 A A H < S+ 0 0 8 -4,-2.7 -1,-0.2 -5,-0.3 -2,-0.2 0.985 95.3 43.8 -54.2 -69.7 -4.3 2.5 -4.7 24 24 A L H < S- 0 0 53 -4,-0.6 2,-0.3 1,-0.1 -1,-0.2 0.879 137.4 -25.2 -43.5 -46.4 -2.9 3.4 -8.2 25 25 A K S < S- 0 0 103 -4,-1.1 2,-0.2 41,-0.0 -1,-0.1 -0.972 79.4 -74.5-161.6 169.9 -3.5 -0.2 -9.2 26 26 A A - 0 0 28 -2,-0.3 2,-0.3 41,-0.1 41,-0.2 -0.476 45.4-165.3 -74.9 143.3 -3.9 -3.8 -8.0 27 27 A Y B -A 66 0A 22 39,-1.5 39,-2.7 -2,-0.2 2,-0.3 -0.924 17.5-117.3-130.1 154.9 -0.8 -5.6 -6.9 28 28 A K >> - 0 0 53 -2,-0.3 4,-2.3 37,-0.2 5,-0.5 -0.648 32.6-108.9 -91.8 147.7 0.1 -9.3 -6.3 29 29 A K H >5S+ 0 0 74 35,-0.4 4,-1.0 -2,-0.3 -1,-0.1 0.875 123.0 34.2 -35.8 -54.7 1.2 -10.6 -2.9 30 30 A P H >5S+ 0 0 91 0, 0.0 4,-2.0 0, 0.0 -1,-0.2 0.943 121.1 48.0 -69.7 -50.5 4.7 -11.0 -4.3 31 31 A E H >5S+ 0 0 78 1,-0.2 4,-1.1 2,-0.2 3,-0.4 0.983 105.4 55.8 -54.5 -67.0 4.7 -8.1 -6.7 32 32 A L H >X5S+ 0 0 0 -4,-2.3 4,-1.4 1,-0.3 3,-0.8 0.823 109.2 51.6 -34.1 -44.2 3.4 -5.5 -4.2 33 33 A L H >XXS+ 0 0 17 -4,-1.0 4,-2.5 -5,-0.5 3,-0.6 0.966 95.5 65.0 -61.2 -55.3 6.4 -6.5 -2.0 34 34 A A H 3<5S+ 0 0 60 -4,-2.0 4,-0.4 -3,-0.4 -1,-0.2 0.737 107.0 48.1 -40.2 -24.8 8.9 -6.0 -4.8 35 35 A R H > - 0 0 95 -2,-0.5 4,-2.4 1,-0.1 3,-0.7 -0.386 13.3-135.9 -64.7 136.2 10.3 -6.1 7.9 43 43 A Q H 3> S+ 0 0 156 1,-0.3 4,-0.9 2,-0.2 -1,-0.1 0.936 106.5 54.6 -57.6 -49.7 10.3 -9.9 8.1 44 44 A K H 3> S+ 0 0 161 1,-0.2 4,-0.7 2,-0.2 -1,-0.3 0.760 113.4 45.1 -56.5 -24.6 7.6 -10.0 10.8 45 45 A D H <> S+ 0 0 38 -3,-0.7 4,-3.2 2,-0.2 -1,-0.2 0.821 92.4 77.2 -87.7 -36.3 5.5 -7.9 8.4 46 46 A K H X S+ 0 0 82 -4,-2.4 4,-0.5 1,-0.3 -2,-0.2 0.809 103.9 41.0 -42.7 -34.2 6.2 -9.9 5.3 47 47 A N H >X S+ 0 0 140 -4,-0.9 4,-0.6 2,-0.2 3,-0.5 0.881 111.4 53.7 -82.8 -42.5 3.7 -12.4 6.8 48 48 A S H >X S+ 0 0 39 -4,-0.7 4,-2.3 1,-0.2 3,-1.5 0.854 92.3 76.8 -60.6 -35.6 1.2 -9.8 8.0 49 49 A L H 3X S+ 0 0 0 -4,-3.2 4,-3.1 1,-0.3 5,-0.3 0.900 89.2 55.1 -39.8 -57.4 1.1 -8.3 4.5 50 50 A G H X>S+ 0 0 27 -4,-2.3 4,-2.7 1,-0.2 3,-1.1 0.929 100.8 63.1 -63.3 -46.9 -3.4 -6.5 5.4 53 53 A L H 3X5S+ 0 0 0 -4,-3.1 4,-1.1 1,-0.3 -1,-0.2 0.811 110.3 41.7 -47.8 -32.4 -4.0 -6.9 1.6 54 54 A Q H <<5S+ 0 0 137 -4,-0.6 -1,-0.3 -3,-0.5 -2,-0.2 0.673 112.7 53.8 -89.0 -20.2 -7.3 -8.4 2.6 55 55 A Q H <<5S+ 0 0 130 -3,-1.1 -2,-0.2 -4,-0.9 -3,-0.2 0.724 132.6 11.5 -84.9 -24.0 -7.9 -5.8 5.3 56 56 A V H <5S+ 0 0 2 -4,-2.7 13,-3.1 -5,-0.1 2,-0.2 0.536 133.0 38.8-124.9 -21.8 -7.4 -2.9 2.9 57 57 A A E <>> -B 65 0A 80 5,-1.7 4,-1.5 -2,-0.4 5,-0.9 -0.878 9.0-153.1-108.6 104.2 -9.3 -11.6 -7.1 61 61 A S T 345S+ 0 0 106 -2,-0.7 -1,-0.1 1,-0.2 -2,-0.0 0.755 90.0 77.7 -43.2 -26.0 -8.9 -15.3 -7.9 62 62 A K T 345S- 0 0 184 1,-0.2 -1,-0.2 3,-0.1 -3,-0.0 0.966 123.3 -4.2 -49.1 -67.6 -9.2 -14.1 -11.5 63 63 A D T <45S- 0 0 108 -3,-0.9 -1,-0.2 2,-0.2 -2,-0.2 0.033 94.2-117.7-117.2 23.6 -5.6 -12.7 -11.8 64 64 A L T <5 + 0 0 117 -4,-1.5 -35,-0.4 1,-0.2 2,-0.4 0.803 69.9 144.1 43.4 33.1 -4.6 -13.4 -8.2 65 65 A S E < - B 0 60A 19 -5,-0.9 -5,-1.7 -37,-0.1 2,-0.4 -0.863 50.4-128.3-106.3 135.7 -4.2 -9.6 -8.0 66 66 A Y E -AB 27 59A 27 -39,-2.7 -39,-1.5 -2,-0.4 2,-0.5 -0.660 19.6-154.6 -83.9 131.4 -5.1 -7.6 -4.9 67 67 A T E - B 0 58A 50 -9,-2.6 -9,-2.0 -2,-0.4 2,-0.2 -0.924 20.3-118.9-111.1 124.5 -7.4 -4.6 -5.4 68 68 A L E - B 0 57A 13 -46,-0.8 -11,-0.3 -2,-0.5 5,-0.1 -0.404 36.6-117.8 -61.4 122.1 -7.3 -1.6 -3.0 69 69 A K - 0 0 44 -13,-3.1 4,-0.2 -2,-0.2 -1,-0.1 0.185 17.2-119.6 -48.8 178.6 -10.7 -1.3 -1.4 70 70 A D S > S+ 0 0 64 2,-0.1 3,-1.9 3,-0.1 4,-0.4 0.924 106.7 46.2 -89.9 -61.5 -12.8 1.9 -1.9 71 71 A Y T >> S+ 0 0 111 1,-0.3 3,-3.0 2,-0.2 4,-0.6 0.887 103.3 66.7 -48.9 -44.3 -13.2 3.3 1.6 72 72 A V H >> S+ 0 0 0 1,-0.3 3,-1.9 2,-0.2 4,-1.4 0.833 83.3 75.0 -46.9 -36.3 -9.5 2.8 2.2 73 73 A F H <4 S+ 0 0 12 -3,-1.9 -1,-0.3 1,-0.3 -2,-0.2 0.811 92.5 54.4 -47.6 -32.5 -8.9 5.4 -0.4 74 74 A K H <4 S+ 0 0 151 -3,-3.0 -1,-0.3 -4,-0.4 -2,-0.2 0.800 103.1 55.0 -73.2 -29.5 -10.0 7.9 2.3 75 75 A E H << S+ 0 0 69 -3,-1.9 -2,-0.2 -4,-0.6 -1,-0.2 0.746 91.6 97.3 -74.7 -24.1 -7.4 6.5 4.7 76 76 A L S < S- 0 0 11 -4,-1.4 2,-0.5 -3,-0.1 -60,-0.0 0.132 78.0-116.5 -54.4 178.7 -4.6 7.2 2.1 77 77 A Q > - 0 0 79 -61,-0.1 3,-1.7 1,-0.1 -1,-0.1 -0.959 10.1-158.1-130.3 114.9 -2.5 10.3 2.2 78 78 A R T 3 S+ 0 0 195 -2,-0.5 -1,-0.1 1,-0.3 14,-0.1 0.695 99.9 55.7 -61.0 -17.6 -2.5 12.9 -0.6 79 79 A D T 3 S+ 0 0 140 -3,-0.0 -1,-0.3 3,-0.0 9,-0.0 -0.078 77.4 148.9-105.6 31.9 0.9 13.9 0.7 80 80 A W X - 0 0 13 -3,-1.7 3,-1.7 1,-0.1 8,-0.1 -0.522 45.6-146.1 -71.5 125.5 2.4 10.4 0.4 81 81 A P T 3 S+ 0 0 88 0, 0.0 -1,-0.1 0, 0.0 -72,-0.1 0.469 94.4 72.0 -69.7 -0.3 6.1 10.5 -0.4 82 82 A G T 3 S+ 0 0 36 2,-0.1 2,-0.7 1,-0.0 5,-0.1 0.538 78.1 87.1 -92.1 -8.1 5.6 7.4 -2.4 83 83 A Y < - 0 0 12 -3,-1.7 -1,-0.0 4,-0.1 -62,-0.0 -0.839 69.8-150.0 -98.2 114.1 3.8 9.2 -5.2 84 84 A S > - 0 0 68 -2,-0.7 4,-2.4 1,-0.1 5,-0.4 -0.081 44.2 -78.4 -71.5 176.7 6.1 10.6 -7.8 85 85 A E T 4 S+ 0 0 170 1,-0.2 4,-0.4 2,-0.2 -1,-0.1 0.759 138.1 34.9 -47.9 -25.5 5.4 13.8 -9.9 86 86 A I T >> S+ 0 0 96 2,-0.1 4,-1.9 3,-0.1 3,-0.7 0.893 111.9 55.5 -94.3 -56.9 3.1 11.5 -11.9 87 87 A D H >> S+ 0 0 40 1,-0.3 4,-2.1 2,-0.2 3,-0.9 0.903 104.2 57.0 -41.8 -55.2 1.7 9.1 -9.3 88 88 A R H 3X S+ 0 0 145 -4,-2.4 4,-2.1 1,-0.3 3,-0.4 0.898 113.0 39.8 -44.5 -50.1 0.4 12.0 -7.2 89 89 A R H <4 S+ 0 0 172 -3,-0.7 4,-0.3 -4,-0.4 -1,-0.3 0.697 114.1 55.9 -74.3 -19.4 -1.6 13.2 -10.2 90 90 A S H > S+ 0 0 50 -4,-0.3 4,-2.0 2,-0.2 3,-1.1 0.996 102.8 44.7 -70.3 -70.4 -8.2 10.7 -9.9 94 94 A V H >X S+ 0 0 35 -4,-0.6 4,-2.9 1,-0.3 3,-1.5 0.906 112.6 51.6 -37.9 -66.4 -9.3 7.5 -8.2 95 95 A L H 3X S+ 0 0 11 -4,-1.4 4,-2.6 1,-0.3 -1,-0.3 0.838 112.0 49.0 -42.0 -39.7 -10.0 9.2 -4.8 96 96 A S H << S+ 0 0 83 -3,-1.1 -1,-0.3 -4,-0.9 -2,-0.2 0.818 112.7 46.8 -71.9 -31.6 -12.1 11.6 -6.9 97 97 A R H << S+ 0 0 198 -4,-2.0 -2,-0.2 -3,-1.5 -1,-0.2 0.781 125.7 30.4 -79.9 -28.9 -13.9 8.8 -8.6 98 98 A K H < S+ 0 0 86 -4,-2.9 2,-1.3 -5,-0.3 -2,-0.2 0.903 107.4 68.2 -93.2 -58.5 -14.5 6.9 -5.4 99 99 A L < 0 0 65 -4,-2.6 -1,-0.2 -5,-0.3 -28,-0.0 -0.500 360.0 360.0 -68.4 94.4 -14.7 9.7 -2.7 100 100 A N 0 0 202 -2,-1.3 -1,-0.2 -3,-0.1 -4,-0.1 0.447 360.0 360.0 -47.8 360.0 -18.0 11.3 -3.8