==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER DNA BINDING PROTEIN 22-DEC-06 2E5R . COMPND 2 MOLECULE: DYSTROBREVIN ALPHA; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 63 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5716.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 23 36.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 12.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 12.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 6.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 127 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 167.9 -19.2 5.8 3.1 2 2 A S + 0 0 130 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.813 360.0 132.5-170.9 125.9 -19.1 9.2 1.4 3 3 A S - 0 0 114 -2,-0.2 2,-0.3 5,-0.0 0, 0.0 -0.980 41.0-108.7-166.6 167.3 -16.8 11.0 -1.0 4 4 A G - 0 0 54 -2,-0.3 4,-0.2 1,-0.0 3,-0.2 -0.740 14.1-135.9-108.8 157.7 -16.5 12.9 -4.2 5 5 A S S S+ 0 0 119 -2,-0.3 4,-0.1 1,-0.2 -1,-0.0 -0.225 83.3 90.9-102.5 42.3 -15.2 12.0 -7.7 6 6 A S S S- 0 0 123 2,-0.1 -1,-0.2 0, 0.0 3,-0.1 -0.217 101.3 -0.5-128.7 42.1 -13.3 15.3 -8.2 7 7 A G S S+ 0 0 69 1,-0.4 2,-0.2 -3,-0.2 -2,-0.1 -0.326 111.8 54.4 179.5 -88.5 -9.9 14.4 -6.8 8 8 A V - 0 0 101 -4,-0.2 2,-0.4 -2,-0.0 -1,-0.4 -0.530 57.6-171.8 -76.7 138.6 -9.0 11.0 -5.3 9 9 A F - 0 0 170 -2,-0.2 -4,-0.1 1,-0.1 -1,-0.0 -0.968 65.7 -17.7-137.1 119.7 -9.6 7.9 -7.5 10 10 A H S S- 0 0 177 -2,-0.4 -1,-0.1 2,-0.0 3,-0.1 0.946 87.1-176.6 52.3 54.3 -9.3 4.3 -6.3 11 11 A P - 0 0 54 0, 0.0 2,-1.6 0, 0.0 -1,-0.0 0.049 43.9 -59.2 -69.7-175.8 -7.2 5.3 -3.3 12 12 A V S S+ 0 0 26 8,-0.2 2,-0.4 12,-0.0 12,-0.1 -0.523 75.6 157.5 -72.0 89.6 -5.6 3.0 -0.7 13 13 A E - 0 0 100 -2,-1.6 7,-0.1 -3,-0.1 5,-0.1 -0.962 35.5-129.6-121.1 133.8 -8.7 1.2 0.5 14 14 A C - 0 0 8 -2,-0.4 23,-0.1 5,-0.4 12,-0.0 -0.007 14.2-127.4 -67.7 179.2 -8.9 -2.2 2.2 15 15 A S S S+ 0 0 71 21,-0.5 22,-0.1 3,-0.1 -1,-0.1 0.787 99.2 16.4 -98.9 -37.7 -11.2 -5.0 1.2 16 16 A Y S S+ 0 0 174 20,-0.4 21,-0.1 1,-0.0 -2,-0.0 0.862 137.6 30.1 -98.6 -72.2 -12.8 -5.8 4.5 17 17 A C S S- 0 0 54 1,-0.1 20,-0.1 21,-0.0 -3,-0.0 0.652 89.6-152.3 -64.5 -13.8 -12.2 -2.9 7.0 18 18 A H - 0 0 114 -5,-0.1 -1,-0.1 1,-0.1 -3,-0.1 0.884 22.9-167.7 39.0 53.4 -12.2 -0.7 3.9 19 19 A S - 0 0 45 1,-0.1 -5,-0.4 2,-0.0 -1,-0.1 -0.045 22.0-163.9 -62.8 171.0 -9.9 1.7 5.8 20 20 A E + 0 0 175 -7,-0.1 -8,-0.2 -9,-0.0 -1,-0.1 0.631 56.7 94.5-125.3 -44.1 -9.2 5.2 4.5 21 21 A S S S- 0 0 72 1,-0.1 2,-1.3 2,-0.0 3,-0.4 -0.190 77.5-122.2 -55.0 144.6 -6.1 6.5 6.3 22 22 A M S S+ 0 0 150 1,-0.2 -1,-0.1 -9,-0.0 -9,-0.1 -0.638 81.7 96.1 -93.1 79.0 -2.8 6.0 4.5 23 23 A M + 0 0 137 -2,-1.3 -1,-0.2 2,-0.0 -2,-0.0 0.607 68.4 59.3-128.4 -49.8 -0.9 4.0 7.1 24 24 A G S S- 0 0 12 -3,-0.4 2,-0.2 -12,-0.1 14,-0.1 0.053 70.5-136.8 -73.8-171.1 -1.3 0.3 6.3 25 25 A F - 0 0 123 12,-0.1 2,-0.9 -3,-0.0 14,-0.1 -0.816 31.4 -73.6-140.4 179.5 -0.2 -1.5 3.1 26 26 A R E -A 60 0A 32 34,-0.7 34,-2.6 -2,-0.2 2,-0.7 -0.708 47.0-178.9 -84.1 107.5 -1.4 -4.1 0.6 27 27 A Y E -AB 59 37A 41 10,-2.5 10,-2.7 -2,-0.9 2,-0.6 -0.892 4.9-169.8-112.6 104.2 -1.1 -7.5 2.2 28 28 A R E -AB 58 36A 109 30,-2.3 30,-2.8 -2,-0.7 8,-0.2 -0.825 27.4-115.3 -96.8 122.4 -2.1 -10.4 -0.0 29 29 A C E -A 57 0A 4 6,-2.4 28,-0.3 -2,-0.6 3,-0.3 0.057 22.8-119.3 -46.5 162.1 -2.4 -13.8 1.7 30 30 A Q S S+ 0 0 106 26,-2.3 2,-0.7 1,-0.3 27,-0.1 0.996 96.5 17.8 -70.2 -73.2 -0.1 -16.6 0.6 31 31 A Q S S+ 0 0 160 25,-0.2 2,-0.3 26,-0.0 -1,-0.3 -0.878 98.7 94.3-108.2 104.6 -2.4 -19.3 -0.8 32 32 A C - 0 0 39 -2,-0.7 3,-0.1 -3,-0.3 19,-0.0 -0.974 68.0-115.6-174.6 168.1 -5.8 -18.0 -1.6 33 33 A H S S- 0 0 168 -2,-0.3 2,-0.3 1,-0.2 -1,-0.2 0.973 98.9 -7.3 -79.9 -69.9 -8.1 -16.6 -4.3 34 34 A N S S+ 0 0 135 2,-0.0 2,-0.4 -6,-0.0 -1,-0.2 -0.747 80.9 140.6-135.0 87.0 -8.9 -13.0 -3.2 35 35 A Y + 0 0 46 -2,-0.3 -6,-2.4 -3,-0.1 2,-0.4 -0.885 15.3 161.7-133.0 102.4 -7.6 -12.2 0.2 36 36 A Q E +B 28 0A 79 -2,-0.4 -21,-0.5 -8,-0.2 -20,-0.4 -0.975 6.3 167.3-124.6 133.7 -6.1 -8.7 0.9 37 37 A L E -B 27 0A 8 -10,-2.7 -10,-2.5 -2,-0.4 2,-0.2 -0.863 22.6-129.2-136.8 170.5 -5.6 -7.0 4.2 38 38 A C > - 0 0 4 -2,-0.3 4,-2.7 -12,-0.2 5,-0.3 -0.601 43.1 -83.4-115.0 177.1 -3.8 -4.0 5.7 39 39 A Q H > S+ 0 0 72 -2,-0.2 4,-3.2 2,-0.2 5,-0.2 0.912 128.8 44.5 -44.4 -54.0 -1.5 -3.4 8.7 40 40 A D H > S+ 0 0 100 2,-0.2 4,-2.4 1,-0.2 5,-0.5 0.988 110.2 50.9 -55.6 -69.5 -4.5 -3.2 11.0 41 41 A C H > S+ 0 0 3 1,-0.3 4,-2.6 2,-0.2 -1,-0.2 0.830 116.3 45.6 -37.0 -42.5 -6.5 -6.2 9.7 42 42 A F H < S+ 0 0 100 -4,-2.7 -1,-0.3 2,-0.2 -2,-0.2 0.958 106.8 55.7 -68.9 -52.9 -3.2 -8.2 10.1 43 43 A W H < S+ 0 0 204 -4,-3.2 -2,-0.2 -5,-0.3 -1,-0.2 0.882 119.9 33.6 -46.6 -44.7 -2.3 -6.8 13.6 44 44 A R H < S- 0 0 216 -4,-2.4 -1,-0.2 -5,-0.2 -2,-0.2 0.861 113.6-127.8 -80.8 -38.9 -5.7 -8.0 14.8 45 45 A G < - 0 0 48 -4,-2.6 2,-0.3 -5,-0.5 -3,-0.2 0.572 23.2-155.4 92.2 118.5 -5.9 -11.1 12.5 46 46 A H + 0 0 59 6,-0.1 2,-0.3 7,-0.1 -9,-0.0 -0.878 23.8 137.0-125.1 157.6 -8.8 -11.9 10.2 47 47 A A - 0 0 52 -2,-0.3 2,-0.3 7,-0.1 5,-0.2 -0.967 16.2-176.8-175.3-175.7 -10.1 -15.2 8.7 48 48 A G - 0 0 46 3,-3.2 5,-0.0 -2,-0.3 -2,-0.0 -0.983 57.0 -50.6 179.4 179.9 -13.1 -17.3 7.8 49 49 A G S S+ 0 0 99 -2,-0.3 3,-0.1 1,-0.2 -1,-0.0 0.797 137.7 32.1 -39.1 -35.6 -14.5 -20.5 6.4 50 50 A S S S+ 0 0 106 1,-0.1 2,-0.2 2,-0.0 -1,-0.2 0.940 116.3 51.6 -87.1 -71.6 -12.3 -19.8 3.4 51 51 A H S S- 0 0 6 1,-0.0 -3,-3.2 2,-0.0 2,-0.4 -0.473 77.6-142.9 -71.4 137.0 -9.2 -18.0 4.7 52 52 A S > - 0 0 39 -5,-0.2 3,-1.8 -2,-0.2 -6,-0.1 -0.857 17.3-128.6-105.8 136.2 -7.4 -19.7 7.6 53 53 A N T 3 S+ 0 0 128 -2,-0.4 -1,-0.1 1,-0.3 -7,-0.1 0.725 109.6 69.3 -51.0 -20.8 -5.8 -17.8 10.5 54 54 A Q T 3 S+ 0 0 165 2,-0.1 2,-0.5 0, 0.0 -1,-0.3 0.087 78.3 107.8 -86.8 24.0 -2.8 -19.9 9.7 55 55 A H < - 0 0 59 -3,-1.8 2,-0.1 -25,-0.1 -26,-0.0 -0.912 61.8-143.9-108.5 122.6 -2.4 -18.1 6.4 56 56 A Q - 0 0 111 -2,-0.5 -26,-2.3 -27,-0.1 2,-0.4 -0.420 12.1-134.3 -80.7 157.5 0.5 -15.6 6.1 57 57 A M E -A 29 0A 15 -28,-0.3 2,-0.4 -2,-0.1 -28,-0.3 -0.895 9.5-144.1-116.0 144.5 0.3 -12.4 4.1 58 58 A K E -A 28 0A 88 -30,-2.8 -30,-2.3 -2,-0.4 2,-0.5 -0.838 18.7-120.0-108.3 144.5 2.7 -11.0 1.6 59 59 A E E +A 27 0A 158 -2,-0.4 2,-0.3 -32,-0.2 -32,-0.2 -0.701 39.3 170.5 -85.3 125.4 3.6 -7.3 1.1 60 60 A Y E -A 26 0A 88 -34,-2.6 -34,-0.7 -2,-0.5 2,-0.6 -0.945 32.4-137.4-134.4 155.2 2.8 -6.0 -2.4 61 61 A T + 0 0 144 -2,-0.3 -2,-0.0 1,-0.1 -34,-0.0 -0.781 66.8 99.8-115.7 87.0 2.7 -2.5 -4.1 62 62 A S 0 0 102 -2,-0.6 -1,-0.1 0, 0.0 0, 0.0 0.589 360.0 360.0-130.3 -49.9 -0.3 -2.3 -6.3 63 63 A W 0 0 78 -3,-0.2 -50,-0.1 -51,-0.0 -2,-0.1 0.166 360.0 360.0 -75.8 360.0 -3.1 -0.4 -4.5