==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSPORT PROTEIN 09-FEB-07 2EBQ . COMPND 2 MOLECULE: NUCLEAR PORE COMPLEX PROTEIN NUP153; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR H.P.ZHANG,C.KUROSAKI,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN . 47 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4577.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 10 21.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 5 10.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 3 6.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 2 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 108 0, 0.0 2,-0.3 0, 0.0 3,-0.2 0.000 360.0 360.0 360.0 -85.2 -17.2 1.9 7.8 2 2 A S + 0 0 117 1,-0.2 0, 0.0 2,-0.1 0, 0.0 -0.724 360.0 35.9-110.5 161.0 -19.0 -0.7 9.8 3 3 A S S S- 0 0 126 -2,-0.3 -1,-0.2 2,-0.0 0, 0.0 0.919 134.4 -17.6 66.1 45.0 -18.3 -4.4 10.5 4 4 A G S S- 0 0 72 -3,-0.2 2,-0.3 2,-0.0 -2,-0.1 0.656 75.0-139.1 92.9 110.6 -14.5 -3.8 10.7 5 5 A S - 0 0 92 -4,-0.1 2,-0.4 1,-0.0 3,-0.0 -0.708 19.2-113.2-101.2 152.5 -12.8 -0.7 9.3 6 6 A S - 0 0 76 -2,-0.3 -2,-0.0 1,-0.1 -1,-0.0 -0.681 49.0 -84.7 -86.5 133.1 -9.6 -0.6 7.3 7 7 A G - 0 0 60 -2,-0.4 -1,-0.1 1,-0.2 0, 0.0 -0.053 37.4-160.4 -37.1 109.7 -6.6 1.2 9.0 8 8 A V + 0 0 139 -3,-0.0 -1,-0.2 0, 0.0 2,-0.1 0.190 60.0 103.3 -82.7 18.0 -7.2 4.8 8.1 9 9 A I S S- 0 0 118 2,-0.1 -3,-0.0 1,-0.1 0, 0.0 -0.353 76.8-119.1 -93.2 176.5 -3.5 5.4 8.9 10 10 A G S S+ 0 0 47 -2,-0.1 -1,-0.1 2,-0.0 -3,-0.0 0.973 89.0 57.2 -79.1 -76.1 -0.6 5.9 6.5 11 11 A T S S- 0 0 57 1,-0.1 2,-0.4 11,-0.1 11,-0.2 -0.192 77.5-138.5 -57.2 148.4 1.9 3.2 7.2 12 12 A W E -A 21 0A 27 9,-1.6 9,-1.5 7,-0.0 2,-0.6 -0.923 8.5-127.2-116.0 138.3 0.7 -0.4 6.8 13 13 A D E -A 20 0A 129 -2,-0.4 7,-0.2 7,-0.2 5,-0.0 -0.726 28.3-131.2 -86.1 118.9 1.5 -3.3 9.1 14 14 A C - 0 0 4 5,-1.9 -1,-0.1 -2,-0.6 21,-0.0 0.014 7.0-150.6 -58.8 172.2 2.8 -6.3 7.2 15 15 A D S S+ 0 0 138 3,-0.1 -1,-0.1 2,-0.0 -2,-0.0 0.683 88.2 42.3-115.9 -37.7 1.4 -9.8 7.7 16 16 A T S S+ 0 0 94 1,-0.1 -2,-0.0 3,-0.1 0, 0.0 0.985 138.2 9.0 -74.9 -65.5 4.4 -12.1 6.9 17 17 A C S S- 0 0 50 2,-0.1 -1,-0.1 16,-0.0 -3,-0.0 0.687 92.8-137.4 -88.8 -21.6 7.2 -10.3 8.6 18 18 A L + 0 0 121 1,-0.2 2,-0.3 -5,-0.0 -3,-0.1 0.918 46.6 156.5 64.4 44.9 4.9 -7.8 10.4 19 19 A V - 0 0 47 -7,-0.0 -5,-1.9 1,-0.0 2,-0.7 -0.700 48.6-108.5-102.6 155.4 7.2 -4.8 9.6 20 20 A Q E +A 13 0A 154 -2,-0.3 2,-0.3 -7,-0.2 -7,-0.2 -0.733 43.5 176.7 -86.3 114.2 6.3 -1.2 9.4 21 21 A N E -A 12 0A 7 -9,-1.5 -9,-1.6 -2,-0.7 7,-0.1 -0.871 31.8-103.0-118.7 151.8 6.4 0.0 5.8 22 22 A K - 0 0 148 -2,-0.3 3,-0.4 -11,-0.2 -11,-0.1 -0.322 27.1-120.0 -69.9 152.5 5.5 3.4 4.2 23 23 A P S S+ 0 0 82 0, 0.0 -1,-0.1 0, 0.0 -12,-0.1 0.533 111.7 61.4 -69.8 -5.3 2.2 3.9 2.4 24 24 A E S S+ 0 0 167 3,-0.0 2,-0.4 2,-0.0 3,-0.0 0.839 81.2 88.4 -88.7 -39.1 4.3 4.8 -0.7 25 25 A A - 0 0 40 -3,-0.4 4,-0.1 1,-0.2 -4,-0.0 -0.477 64.2-156.4 -65.7 118.4 6.1 1.4 -1.1 26 26 A I S S+ 0 0 127 -2,-0.4 9,-1.5 2,-0.1 2,-0.2 0.824 78.9 25.8 -64.5 -31.8 3.9 -0.9 -3.2 27 27 A K B S-B 34 0B 99 7,-0.2 5,-0.0 1,-0.1 -3,-0.0 -0.762 94.3 -87.9-126.6 173.0 5.7 -3.9 -1.6 28 28 A C - 0 0 2 5,-1.9 -1,-0.1 -2,-0.2 -2,-0.1 -0.187 20.1-148.9 -74.9 171.7 7.5 -4.7 1.7 29 29 A V S S+ 0 0 108 3,-0.1 -1,-0.1 -4,-0.1 -8,-0.0 0.708 91.4 41.4-111.2 -35.9 11.2 -4.2 2.3 30 30 A A S S+ 0 0 63 1,-0.1 -2,-0.0 3,-0.1 0, 0.0 0.977 136.8 13.3 -76.9 -63.0 12.0 -7.0 4.7 31 31 A C S S- 0 0 44 2,-0.1 -1,-0.1 -12,-0.0 -2,-0.0 0.673 94.0-137.2 -87.3 -19.9 10.0 -9.9 3.3 32 32 A E + 0 0 134 1,-0.2 -3,-0.1 -5,-0.0 -5,-0.0 0.890 42.9 164.9 63.8 40.6 9.4 -8.0 -0.0 33 33 A T - 0 0 42 1,-0.1 -5,-1.9 -6,-0.0 2,-0.3 -0.709 41.8-108.9 -93.6 140.8 5.8 -9.2 -0.1 34 34 A P B -B 27 0B 101 0, 0.0 -7,-0.2 0, 0.0 -1,-0.1 -0.497 39.1-108.4 -69.7 126.1 3.2 -7.6 -2.4 35 35 A K - 0 0 107 -9,-1.5 -21,-0.0 -2,-0.3 -9,-0.0 -0.210 37.5-116.4 -54.7 139.8 0.6 -5.5 -0.6 36 36 A P S S+ 0 0 102 0, 0.0 -1,-0.1 0, 0.0 -3,-0.0 -0.032 77.9 70.3 -69.9 177.8 -2.8 -7.1 -0.4 37 37 A G - 0 0 63 3,-0.1 4,-0.1 1,-0.0 -2,-0.0 0.945 54.1-157.7 74.0 89.7 -6.0 -5.6 -2.0 38 38 A T S S+ 0 0 148 2,-0.1 2,-0.2 0, 0.0 -1,-0.0 0.911 78.0 61.6 -63.0 -43.9 -5.9 -5.8 -5.8 39 39 A C S S- 0 0 105 1,-0.0 2,-0.6 2,-0.0 3,-0.1 -0.577 87.2-123.3 -86.3 148.3 -8.4 -3.0 -6.2 40 40 A V > - 0 0 102 -2,-0.2 3,-1.9 1,-0.2 4,-0.2 -0.819 6.6-150.0 -96.0 120.9 -7.8 0.5 -4.9 41 41 A K G > S+ 0 0 138 -2,-0.6 3,-2.6 1,-0.3 -1,-0.2 0.895 90.5 79.4 -52.2 -44.0 -10.3 1.8 -2.4 42 42 A R G 3 S+ 0 0 215 1,-0.3 -1,-0.3 -3,-0.1 4,-0.1 0.785 73.6 82.5 -34.0 -36.1 -9.6 5.4 -3.7 43 43 A A G < S+ 0 0 89 -3,-1.9 -1,-0.3 2,-0.1 -2,-0.2 0.872 81.5 72.2 -37.7 -52.4 -11.9 4.3 -6.6 44 44 A L S < S- 0 0 111 -3,-2.6 2,-0.4 -4,-0.2 -4,-0.0 -0.024 102.5 -87.5 -60.6 170.6 -14.9 5.2 -4.4 45 45 A T - 0 0 135 1,-0.1 -1,-0.1 0, 0.0 -2,-0.1 -0.711 43.0-120.6 -87.7 130.0 -15.8 8.8 -3.6 46 46 A L 0 0 141 -2,-0.4 -1,-0.1 -4,-0.1 -4,-0.0 -0.091 360.0 360.0 -61.3 165.3 -14.2 10.3 -0.5 47 47 A T 0 0 181 0, 0.0 -1,-0.1 0, 0.0 0, 0.0 -0.079 360.0 360.0 -65.6 360.0 -16.3 11.6 2.4