==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER OXIDOREDUCTASE 28-MAR-07 2EO2 . COMPND 2 MOLECULE: ADULT MALE HYPOTHALAMUS CDNA, RIKEN FULL-LENGTH . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR C.KUROSAKI,T.NAGASHIMA,M.YOSHIDA,F.HAYASHI,S.YOKOYAMA,RIKEN . 71 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5847.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 57.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 10 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 7 9.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 22 31.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 123 0, 0.0 2,-0.3 0, 0.0 13,-0.0 0.000 360.0 360.0 360.0-174.0 -6.9 -3.4 8.6 2 2 A S - 0 0 124 2,-0.0 2,-0.5 0, 0.0 0, 0.0 -0.946 360.0-148.8-147.5 121.8 -8.5 0.1 8.2 3 3 A S + 0 0 127 -2,-0.3 2,-0.2 3,-0.0 3,-0.1 -0.777 51.7 89.6 -93.4 128.1 -8.5 2.4 5.2 4 4 A G + 0 0 64 1,-0.5 3,-0.1 -2,-0.5 -1,-0.0 -0.681 62.8 32.2-172.1-131.7 -8.6 6.1 5.9 5 5 A S S S- 0 0 114 -2,-0.2 2,-1.1 1,-0.2 -1,-0.5 0.004 84.1 -98.5 -46.1 154.7 -6.2 9.0 6.4 6 6 A S - 0 0 115 -3,-0.1 -1,-0.2 1,-0.1 3,-0.1 -0.689 45.0-156.7 -84.2 99.7 -2.9 8.8 4.5 7 7 A G - 0 0 41 -2,-1.1 2,-0.4 1,-0.2 3,-0.3 0.313 33.3 -67.9 -57.4-163.5 -0.3 7.5 7.0 8 8 A S S S- 0 0 102 1,-0.2 -1,-0.2 3,-0.0 3,-0.1 -0.781 105.3 -20.0 -98.1 137.5 3.4 8.1 6.8 9 9 A T S S+ 0 0 112 -2,-0.4 2,-1.3 1,-0.2 3,-0.3 0.809 86.8 163.4 34.9 40.9 5.5 6.5 4.0 10 10 A Q + 0 0 113 -3,-0.3 -1,-0.2 1,-0.2 -3,-0.1 -0.682 28.2 105.3 -91.1 86.7 2.6 4.0 3.7 11 11 A T S > S+ 0 0 76 -2,-1.3 4,-0.9 -3,-0.1 -1,-0.2 0.642 86.1 20.8-124.3 -60.4 3.2 2.4 0.3 12 12 A D H > S+ 0 0 32 -3,-0.3 4,-3.0 2,-0.2 5,-0.2 0.914 116.6 63.2 -80.7 -47.5 4.5 -1.1 0.6 13 13 A K H > S+ 0 0 113 -4,-0.3 4,-1.4 1,-0.2 -1,-0.1 0.906 103.3 50.2 -42.0 -55.5 3.4 -1.8 4.2 14 14 A A H >> S+ 0 0 26 1,-0.2 4,-1.2 2,-0.2 3,-0.6 0.933 112.2 46.8 -50.5 -53.4 -0.3 -1.4 3.1 15 15 A L H 3X S+ 0 0 43 -4,-0.9 4,-2.3 1,-0.2 5,-0.2 0.935 100.0 67.5 -55.7 -50.3 0.2 -3.9 0.2 16 16 A Y H 3X S+ 0 0 20 -4,-3.0 4,-2.8 1,-0.2 -1,-0.2 0.853 99.4 52.8 -37.1 -47.8 2.1 -6.4 2.4 17 17 A N H << S+ 0 0 61 -4,-1.4 -1,-0.2 -3,-0.6 -2,-0.2 0.965 107.9 48.2 -55.4 -58.0 -1.2 -6.9 4.2 18 18 A R H < S+ 0 0 174 -4,-1.2 -2,-0.2 -3,-0.2 -1,-0.2 0.922 113.2 48.9 -48.9 -51.8 -3.2 -7.6 1.0 19 19 A L H < S+ 0 0 35 -4,-2.3 -1,-0.2 1,-0.3 -2,-0.2 0.957 123.9 29.9 -53.9 -56.8 -0.5 -10.1 -0.2 20 20 A V S < S- 0 0 3 -4,-2.8 -1,-0.3 -5,-0.2 -2,-0.1 -0.716 87.1-178.6-109.5 81.2 -0.4 -11.9 3.1 21 21 A P - 0 0 76 0, 0.0 2,-0.5 0, 0.0 7,-0.4 -0.062 26.3-121.2 -69.8 175.4 -3.9 -11.6 4.6 22 22 A L + 0 0 92 1,-0.1 5,-0.1 5,-0.1 -2,-0.0 -0.864 60.3 122.2-127.3 97.9 -5.1 -13.0 8.0 23 23 A V S S+ 0 0 126 -2,-0.5 -1,-0.1 3,-0.3 4,-0.1 0.611 75.7 50.7-122.4 -31.5 -8.0 -15.5 7.8 24 24 A N S S- 0 0 143 2,-0.3 -2,-0.1 -3,-0.2 3,-0.1 0.250 115.9-106.3 -93.0 11.7 -6.5 -18.6 9.5 25 25 A G S S+ 0 0 67 1,-0.1 2,-0.3 0, 0.0 -3,-0.1 0.639 99.3 81.9 73.4 13.3 -5.4 -16.5 12.4 26 26 A V S S- 0 0 70 -5,-0.1 2,-0.6 2,-0.1 -2,-0.3 -0.879 75.4-134.4-154.5 117.0 -1.8 -16.9 11.2 27 27 A R + 0 0 102 -2,-0.3 2,-0.3 -5,-0.1 21,-0.2 -0.596 41.0 155.1 -74.5 116.6 -0.0 -14.8 8.6 28 28 A E - 0 0 110 -2,-0.6 18,-0.1 -7,-0.4 -2,-0.1 -0.985 39.6-117.5-147.6 133.2 1.9 -17.2 6.3 29 29 A F - 0 0 15 16,-1.1 2,-0.3 -2,-0.3 -9,-0.0 0.106 32.5-121.7 -56.3 178.1 3.1 -16.9 2.7 30 30 A S > - 0 0 58 1,-0.0 4,-2.7 0, 0.0 5,-0.3 -0.861 26.3-100.6-126.4 161.0 1.8 -19.2 -0.1 31 31 A E H > S+ 0 0 167 -2,-0.3 4,-1.0 1,-0.2 -2,-0.1 0.720 125.4 51.4 -50.6 -20.4 3.4 -21.7 -2.5 32 32 A I H > S+ 0 0 94 2,-0.2 4,-1.0 3,-0.1 -1,-0.2 0.945 110.1 42.6 -82.3 -56.0 2.9 -18.8 -5.0 33 33 A Q H >> S+ 0 0 10 2,-0.2 4,-2.4 1,-0.2 3,-0.7 0.930 116.9 49.6 -56.5 -48.9 4.5 -15.9 -3.1 34 34 A L H >X S+ 0 0 32 -4,-2.7 4,-2.5 1,-0.3 3,-0.6 0.981 103.0 56.4 -54.2 -66.5 7.4 -18.1 -2.0 35 35 A S H 3X S+ 0 0 65 -4,-1.0 4,-0.7 -5,-0.3 -1,-0.3 0.751 114.7 44.7 -38.4 -27.3 8.3 -19.6 -5.4 36 36 A R H S+ 0 0 1 -4,-2.4 4,-1.5 -3,-0.6 5,-1.4 0.916 101.2 62.2 -60.7 -44.8 10.6 -14.8 -3.2 38 38 A K H ><5S+ 0 0 105 -4,-2.5 3,-0.9 1,-0.3 -1,-0.2 0.915 94.8 61.0 -46.5 -52.1 13.2 -17.5 -3.8 39 39 A K H 3<5S+ 0 0 172 -4,-0.7 -1,-0.3 -5,-0.3 -2,-0.2 0.870 106.1 47.3 -43.8 -44.4 14.1 -16.0 -7.1 40 40 A L H <<5S- 0 0 83 -3,-1.0 -1,-0.3 -4,-0.9 -2,-0.2 0.823 121.0-112.1 -69.0 -31.8 15.1 -12.8 -5.2 41 41 A G T <<5 + 0 0 51 -4,-1.5 2,-1.1 -3,-0.9 -3,-0.2 0.621 67.2 143.9 107.2 19.2 17.1 -14.9 -2.7 42 42 A I < - 0 0 6 -5,-1.4 2,-2.6 -8,-0.1 -1,-0.2 -0.733 30.5-168.4 -94.7 90.6 14.9 -14.3 0.3 43 43 A H + 0 0 179 -2,-1.1 2,-0.3 -5,-0.1 -1,-0.1 -0.383 44.4 124.3 -76.6 64.7 15.0 -17.6 2.2 44 44 A K + 0 0 67 -2,-2.6 -2,-0.1 1,-0.1 -7,-0.1 -0.956 36.0 175.8-128.4 146.7 12.1 -16.6 4.5 45 45 A T + 0 0 89 -2,-0.3 -16,-1.1 1,-0.1 -1,-0.1 0.744 66.7 63.9-112.9 -47.2 8.8 -18.2 5.3 46 46 A D S > S- 0 0 73 -18,-0.1 4,-0.8 1,-0.1 3,-0.3 -0.593 75.9-133.3 -84.9 143.3 7.2 -16.0 8.1 47 47 A P T 4 S+ 0 0 18 0, 0.0 -1,-0.1 0, 0.0 -19,-0.1 0.568 101.1 69.8 -69.8 -8.2 6.3 -12.4 7.4 48 48 A S T 4 S+ 0 0 108 -21,-0.2 -4,-0.0 1,-0.2 0, 0.0 0.950 94.3 49.2 -74.7 -52.2 8.0 -11.5 10.6 49 49 A T T 4 S+ 0 0 77 -3,-0.3 -1,-0.2 2,-0.1 -5,-0.0 0.819 92.9 101.4 -57.1 -31.6 11.6 -12.2 9.6 50 50 A L < - 0 0 14 -4,-0.8 2,-0.3 4,-0.1 3,-0.0 -0.173 63.5-149.9 -55.0 147.2 10.9 -10.1 6.5 51 51 A T >> - 0 0 69 1,-0.1 4,-2.9 0, 0.0 3,-1.5 -0.899 31.3-100.7-123.9 152.8 12.3 -6.5 6.6 52 52 A E H 3> S+ 0 0 108 -2,-0.3 4,-2.8 1,-0.3 5,-0.3 0.820 125.9 55.3 -34.5 -43.1 11.1 -3.2 5.0 53 53 A E H 3> S+ 0 0 115 1,-0.2 4,-1.1 2,-0.2 -1,-0.3 0.923 114.0 37.9 -59.8 -46.5 13.8 -3.9 2.4 54 54 A E H <> S+ 0 0 34 -3,-1.5 4,-3.2 2,-0.2 5,-0.3 0.905 115.5 53.9 -72.0 -43.2 12.4 -7.3 1.6 55 55 A V H X S+ 0 0 12 -4,-2.9 4,-2.0 1,-0.2 5,-0.2 0.957 108.5 47.5 -55.6 -55.9 8.8 -6.2 1.9 56 56 A R H X S+ 0 0 125 -4,-2.8 4,-2.4 -5,-0.3 -1,-0.2 0.838 114.9 49.4 -55.5 -34.1 9.2 -3.3 -0.6 57 57 A K H X S+ 0 0 99 -4,-1.1 4,-1.9 -5,-0.3 5,-0.2 0.954 108.1 49.8 -70.9 -51.9 10.9 -5.8 -2.9 58 58 A F H < S+ 0 0 0 -4,-3.2 4,-0.3 1,-0.2 -2,-0.2 0.805 117.5 43.9 -57.1 -29.8 8.3 -8.5 -2.7 59 59 A A H >< S+ 0 0 6 -4,-2.0 3,-1.0 -5,-0.3 -1,-0.2 0.879 105.4 60.7 -82.5 -42.2 5.7 -5.8 -3.5 60 60 A R H 3< S+ 0 0 147 -4,-2.4 -2,-0.2 1,-0.3 -3,-0.2 0.942 100.4 54.0 -49.6 -56.5 7.7 -4.1 -6.2 61 61 A L T 3< S+ 0 0 79 -4,-1.9 2,-0.7 1,-0.2 -1,-0.3 0.787 105.1 65.6 -50.3 -28.5 7.7 -7.2 -8.4 62 62 A N < + 0 0 54 -3,-1.0 2,-0.5 -4,-0.3 -1,-0.2 -0.861 66.7 172.8-103.1 106.9 4.0 -7.2 -8.0 63 63 A I - 0 0 123 -2,-0.7 5,-0.1 5,-0.0 -3,-0.1 -0.942 18.6-150.0-118.7 113.4 2.3 -4.2 -9.6 64 64 A D - 0 0 60 -2,-0.5 5,-0.1 3,-0.3 -2,-0.0 -0.544 12.3-139.2 -81.4 143.9 -1.5 -4.0 -9.8 65 65 A P S > S+ 0 0 108 0, 0.0 3,-0.7 0, 0.0 -1,-0.1 0.825 101.8 58.5 -69.7 -33.0 -3.2 -2.2 -12.6 66 66 A A T 3 S+ 0 0 97 1,-0.3 2,-0.4 -3,-0.0 -3,-0.0 0.894 116.3 33.2 -64.3 -41.1 -5.8 -0.6 -10.3 67 67 A T T 3 S+ 0 0 84 2,-0.1 2,-1.0 0, 0.0 -3,-0.3 -0.586 77.2 170.1-117.2 68.5 -3.1 1.1 -8.2 68 68 A I < + 0 0 93 -3,-0.7 2,-0.6 -2,-0.4 -5,-0.0 -0.699 7.0 178.2 -84.1 103.5 -0.4 1.9 -10.7 69 69 A T - 0 0 88 -2,-1.0 2,-1.2 -5,-0.1 -2,-0.1 -0.924 18.9-153.9-111.8 115.8 2.1 4.1 -8.9 70 70 A W 0 0 224 -2,-0.6 -2,-0.0 1,-0.1 0, 0.0 -0.722 360.0 360.0 -90.1 94.3 5.2 5.3 -10.8 71 71 A Q 0 0 164 -2,-1.2 -1,-0.1 0, 0.0 -2,-0.0 -0.016 360.0 360.0 -34.5 360.0 7.8 6.0 -8.1