==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 30-MAR-07 2EQK . COMPND 2 MOLECULE: TUDOR DOMAIN-CONTAINING PROTEIN 4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6445.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 55 64.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 22 25.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 17 20.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 10.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 109 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-144.9 -18.1 15.6 -20.1 2 2 A S + 0 0 141 1,-0.2 2,-0.7 2,-0.0 0, 0.0 0.882 360.0 157.5 51.9 41.8 -18.7 12.0 -19.1 3 3 A S + 0 0 117 2,-0.0 -1,-0.2 1,-0.0 2,-0.1 -0.875 12.0 115.2-103.3 114.0 -15.2 11.8 -17.7 4 4 A G + 0 0 78 -2,-0.7 2,-0.5 -3,-0.1 -1,-0.0 -0.452 22.3 167.3-179.8 99.9 -14.6 9.2 -15.1 5 5 A S - 0 0 112 -2,-0.1 2,-0.9 0, 0.0 -2,-0.0 -0.817 12.2-171.7-123.9 91.2 -12.3 6.1 -15.3 6 6 A S + 0 0 90 -2,-0.5 5,-0.0 1,-0.2 -2,-0.0 -0.719 29.0 139.2 -86.1 104.1 -11.8 4.4 -11.9 7 7 A G > + 0 0 18 -2,-0.9 4,-3.0 3,-0.2 5,-0.4 0.796 66.0 44.5-109.4 -51.4 -9.2 1.8 -12.3 8 8 A M H > S+ 0 0 58 2,-0.2 4,-3.0 1,-0.2 5,-0.3 0.994 123.1 32.6 -58.2 -75.3 -6.9 1.9 -9.3 9 9 A I H > S+ 0 0 54 1,-0.2 4,-2.8 2,-0.2 5,-0.4 0.882 121.5 54.2 -49.8 -43.0 -9.5 2.2 -6.5 10 10 A A H > S+ 0 0 32 2,-0.2 4,-2.6 3,-0.2 5,-0.3 0.979 114.5 36.8 -56.2 -62.9 -11.9 0.1 -8.6 11 11 A A H X S+ 0 0 39 -4,-3.0 4,-3.0 2,-0.2 -2,-0.2 0.958 122.3 45.3 -55.4 -56.2 -9.5 -2.8 -9.1 12 12 A Y H < S+ 0 0 3 -4,-3.0 -2,-0.2 -5,-0.4 -3,-0.2 0.971 114.4 46.9 -52.1 -64.0 -8.0 -2.6 -5.6 13 13 A E H < S+ 0 0 78 -4,-2.8 -1,-0.2 -5,-0.3 -2,-0.2 0.925 115.6 45.5 -43.6 -59.5 -11.2 -2.2 -3.8 14 14 A N H < S+ 0 0 124 -4,-2.6 -1,-0.3 -5,-0.4 -2,-0.2 0.895 107.8 72.9 -53.2 -43.5 -12.8 -5.1 -5.7 15 15 A S S < S- 0 0 56 -4,-3.0 2,-0.3 -5,-0.3 3,-0.1 -0.122 80.0-131.4 -67.7 169.3 -9.7 -7.2 -5.2 16 16 A K - 0 0 165 1,-0.1 -1,-0.1 0, 0.0 -2,-0.1 -0.939 31.4 -81.3-127.3 149.5 -8.8 -8.7 -1.8 17 17 A W - 0 0 114 -2,-0.3 -1,-0.1 51,-0.2 54,-0.1 0.024 47.8-156.2 -42.3 151.3 -5.6 -8.7 0.2 18 18 A E - 0 0 64 52,-0.3 2,-0.9 2,-0.1 -1,-0.1 -0.995 23.8-104.9-139.9 143.9 -3.0 -11.3 -0.8 19 19 A P + 0 0 115 0, 0.0 2,-0.4 0, 0.0 -2,-0.0 -0.531 58.2 149.8 -69.7 101.3 -0.1 -13.1 0.9 20 20 A V - 0 0 43 -2,-0.9 2,-0.6 2,-0.0 -2,-0.1 -0.998 47.2-120.1-138.7 140.5 3.0 -11.4 -0.5 21 21 A K - 0 0 156 -2,-0.4 2,-0.5 1,-0.0 0, 0.0 -0.679 27.2-141.6 -81.8 120.0 6.5 -10.8 0.9 22 22 A W - 0 0 7 -2,-0.6 2,-0.2 4,-0.0 24,-0.1 -0.706 19.7-165.3 -85.3 124.8 7.3 -7.1 1.0 23 23 A E - 0 0 106 -2,-0.5 3,-0.4 1,-0.1 20,-0.1 -0.687 28.8 -87.8-107.5 161.9 10.9 -6.2 0.2 24 24 A N S S+ 0 0 116 -2,-0.2 20,-0.2 1,-0.2 -1,-0.1 -0.326 108.6 22.9 -66.6 147.9 12.9 -3.1 0.7 25 25 A D S S+ 0 0 117 18,-1.7 2,-0.3 1,-0.2 -1,-0.2 0.954 94.6 138.2 60.7 52.4 12.8 -0.4 -2.1 26 26 A M - 0 0 43 -3,-0.4 17,-1.8 17,-0.3 2,-0.4 -0.858 48.7-126.4-126.2 161.4 9.5 -1.6 -3.5 27 27 A H E +A 42 0A 75 -2,-0.3 46,-0.8 15,-0.2 2,-0.3 -0.862 38.0 142.6-110.6 143.5 6.3 0.0 -4.8 28 28 A C E -AB 41 72A 0 13,-1.6 13,-2.6 -2,-0.4 2,-0.5 -0.959 42.8-106.6-163.2 175.7 2.8 -0.7 -3.6 29 29 A A E -AB 40 71A 0 42,-2.7 42,-1.1 -2,-0.3 2,-0.3 -0.971 25.3-154.8-122.1 126.2 -0.6 0.9 -2.8 30 30 A V E -AB 39 70A 7 9,-3.1 9,-1.7 -2,-0.5 2,-0.6 -0.738 12.3-133.9 -99.4 146.4 -2.0 1.4 0.7 31 31 A K E -A 38 0A 86 38,-0.7 7,-0.2 -2,-0.3 2,-0.1 -0.880 18.7-143.3-103.3 118.0 -5.7 1.6 1.6 32 32 A I - 0 0 47 5,-0.9 33,-0.0 -2,-0.6 6,-0.0 -0.434 4.9-156.3 -77.2 151.5 -6.7 4.5 3.9 33 33 A Q S S+ 0 0 173 -2,-0.1 -1,-0.1 3,-0.1 0, 0.0 0.925 90.8 40.3 -89.9 -71.2 -9.3 4.0 6.6 34 34 A D S S+ 0 0 139 2,-0.1 2,-0.2 0, 0.0 -1,-0.1 0.787 125.0 46.8 -49.6 -28.7 -10.8 7.4 7.4 35 35 A K S S- 0 0 125 2,-0.1 0, 0.0 1,-0.0 0, 0.0 -0.645 73.8-140.8-111.6 170.2 -10.5 8.1 3.7 36 36 A N + 0 0 135 -2,-0.2 2,-0.4 -5,-0.1 -3,-0.1 -0.103 66.3 108.0-121.1 33.3 -11.5 6.1 0.6 37 37 A Q - 0 0 85 -28,-0.0 -5,-0.9 2,-0.0 2,-0.7 -0.937 64.5-132.4-116.7 134.9 -8.5 6.9 -1.6 38 38 A W E -A 31 0A 13 -2,-0.4 2,-0.3 -7,-0.2 -7,-0.2 -0.752 26.9-168.0 -88.0 115.1 -5.7 4.5 -2.5 39 39 A R E -A 30 0A 96 -9,-1.7 -9,-3.1 -2,-0.7 2,-0.3 -0.742 18.4-121.1-103.5 151.3 -2.3 6.1 -2.0 40 40 A R E -A 29 0A 38 -2,-0.3 18,-0.6 -11,-0.3 2,-0.3 -0.709 31.9-176.7 -92.5 140.2 1.0 4.8 -3.2 41 41 A G E -A 28 0A 0 -13,-2.6 -13,-1.6 -2,-0.3 2,-0.5 -0.905 23.5-127.6-134.3 162.8 3.8 4.0 -0.8 42 42 A Q E -AC 27 55A 54 13,-1.2 13,-0.9 -2,-0.3 2,-0.7 -0.945 33.8-112.3-115.9 118.0 7.5 2.9 -0.8 43 43 A I E + C 0 54A 3 -17,-1.8 -18,-1.7 -2,-0.5 -17,-0.3 -0.213 45.0 171.0 -47.5 94.1 8.5 -0.1 1.3 44 44 A I E - 0 0 49 9,-2.4 2,-0.3 -2,-0.7 10,-0.2 0.990 60.4 -28.0 -72.7 -65.8 10.7 1.8 3.8 45 45 A R E - C 0 53A 150 8,-1.3 8,-2.5 -21,-0.1 2,-0.4 -0.914 59.8-117.1-159.4 128.1 11.4 -0.8 6.4 46 46 A M E - C 0 52A 91 -2,-0.3 6,-0.2 6,-0.2 3,-0.1 -0.511 29.1-179.9 -68.7 120.6 9.5 -3.9 7.6 47 47 A V - 0 0 76 4,-0.5 2,-0.2 -2,-0.4 5,-0.2 0.949 60.4 -13.8 -84.6 -61.1 8.6 -3.5 11.3 48 48 A T S S- 0 0 52 3,-1.3 -1,-0.2 0, 0.0 0, 0.0 -0.734 77.8 -85.6-133.9-177.7 6.7 -6.7 12.1 49 49 A D S S+ 0 0 159 -2,-0.2 3,-0.1 1,-0.2 -3,-0.0 0.511 133.1 24.4 -69.9 -2.9 5.1 -9.7 10.4 50 50 A T S S+ 0 0 70 1,-0.1 17,-3.1 17,-0.0 18,-0.4 0.558 115.7 67.9-129.9 -31.0 2.0 -7.5 10.1 51 51 A L E - D 0 66A 71 15,-0.2 -3,-1.3 16,-0.1 -4,-0.5 -0.669 56.1-179.1 -96.9 151.8 3.3 -3.9 10.2 52 52 A V E -CD 46 65A 0 13,-2.0 13,-1.3 -2,-0.3 2,-0.5 -0.956 24.6-129.8-153.7 130.9 5.4 -2.2 7.5 53 53 A E E +CD 45 64A 40 -8,-2.5 -9,-2.4 -2,-0.3 -8,-1.3 -0.695 35.6 172.1 -84.2 123.9 7.0 1.2 7.2 54 54 A V E -CD 43 63A 0 9,-2.0 9,-1.7 -2,-0.5 2,-0.5 -0.865 26.7-131.3-129.0 163.2 6.2 2.9 3.9 55 55 A L E -CD 42 62A 49 -13,-0.9 2,-1.5 -2,-0.3 -13,-1.2 -0.966 7.7-145.7-120.5 126.5 6.8 6.4 2.4 56 56 A L >> + 0 0 8 5,-2.4 4,-2.8 -2,-0.5 3,-2.5 -0.237 32.9 163.8 -81.9 48.9 4.0 8.3 0.6 57 57 A Y T 34 + 0 0 71 -2,-1.5 -1,-0.2 1,-0.3 -16,-0.1 0.782 68.8 70.0 -36.0 -33.9 6.5 9.8 -1.8 58 58 A D T 34 S+ 0 0 106 -18,-0.6 -1,-0.3 -3,-0.3 -2,-0.1 0.924 122.5 8.6 -52.8 -49.3 3.4 10.7 -3.8 59 59 A V T <4 S- 0 0 73 -3,-2.5 -2,-0.2 -19,-0.3 -1,-0.2 0.818 108.6-109.0-100.2 -44.4 2.5 13.3 -1.3 60 60 A G < + 0 0 55 -4,-2.8 2,-0.4 1,-0.3 -3,-0.2 0.752 67.7 130.6 114.0 46.8 5.5 13.4 1.0 61 61 A V - 0 0 75 -5,-0.2 -5,-2.4 2,-0.0 2,-0.6 -0.989 45.8-143.1-134.4 126.1 4.6 11.9 4.3 62 62 A E E +D 55 0A 168 -2,-0.4 2,-0.3 -7,-0.2 -7,-0.2 -0.770 42.2 134.5 -90.6 120.0 6.5 9.2 6.2 63 63 A L E -D 54 0A 66 -9,-1.7 -9,-2.0 -2,-0.6 2,-0.4 -0.916 45.8-120.7-152.1 176.2 4.2 6.7 7.9 64 64 A V E -D 53 0A 69 -2,-0.3 -11,-0.2 -11,-0.3 2,-0.2 -0.986 26.6-179.8-132.8 124.9 3.7 3.0 8.6 65 65 A V E -D 52 0A 24 -13,-1.3 -13,-2.0 -2,-0.4 2,-0.3 -0.595 33.7 -90.4-114.0 176.7 0.6 1.0 7.7 66 66 A N E >> -D 51 0A 50 -15,-0.2 3,-2.4 -2,-0.2 4,-1.1 -0.691 25.6-127.7 -91.4 141.0 -0.5 -2.7 8.1 67 67 A V T 34 S+ 0 0 13 -17,-3.1 -16,-0.1 -2,-0.3 -1,-0.1 0.712 107.4 72.6 -57.0 -19.4 0.2 -5.2 5.4 68 68 A D T 34 S+ 0 0 97 -18,-0.4 -1,-0.3 1,-0.2 -51,-0.2 0.790 104.8 36.3 -66.5 -27.8 -3.5 -6.0 5.6 69 69 A C T <4 S+ 0 0 33 -3,-2.4 -38,-0.7 -52,-0.1 -1,-0.2 0.608 99.7 100.1 -98.2 -17.0 -4.2 -2.7 3.8 70 70 A L E < -B 30 0A 2 -4,-1.1 2,-0.3 -40,-0.2 -52,-0.3 -0.341 52.9-169.8 -69.9 151.3 -1.2 -2.9 1.6 71 71 A R E -B 29 0A 15 -42,-1.1 -42,-2.7 -54,-0.1 2,-0.2 -0.999 27.1-103.6-145.8 145.1 -1.6 -4.0 -2.0 72 72 A K E -B 28 0A 73 -2,-0.3 2,-1.1 -44,-0.2 -44,-0.2 -0.450 39.4-113.4 -69.0 135.5 0.8 -5.0 -4.9 73 73 A L - 0 0 28 -46,-0.8 -1,-0.1 -2,-0.2 2,-0.1 -0.576 33.7-143.2 -73.5 99.1 1.2 -2.4 -7.6 74 74 A E > - 0 0 99 -2,-1.1 4,-1.5 1,-0.1 3,-0.1 -0.389 8.2-133.4 -65.1 136.5 -0.4 -4.0 -10.6 75 75 A E H >> S+ 0 0 149 1,-0.2 4,-1.9 2,-0.2 3,-0.7 0.941 104.7 57.9 -54.7 -52.0 1.3 -3.2 -13.9 76 76 A N H 34 S+ 0 0 91 1,-0.3 3,-0.4 2,-0.2 -1,-0.2 0.908 105.4 50.0 -44.5 -52.5 -2.0 -2.4 -15.6 77 77 A L H >4 S+ 0 0 10 1,-0.2 3,-0.6 -70,-0.1 -1,-0.3 0.861 105.9 58.0 -56.6 -37.1 -2.7 0.3 -13.1 78 78 A K H << S+ 0 0 117 -4,-1.5 2,-0.5 -3,-0.7 -1,-0.2 0.904 116.4 33.4 -60.5 -42.9 0.8 1.7 -13.6 79 79 A T T 3< S+ 0 0 61 -4,-1.9 2,-0.6 -3,-0.4 -1,-0.3 -0.703 78.5 172.6-117.8 78.9 0.1 2.2 -17.3 80 80 A M < - 0 0 90 -3,-0.6 2,-0.7 -2,-0.5 -3,-0.1 -0.776 62.9 -10.5 -91.0 120.0 -3.6 3.1 -17.7 81 81 A G S S+ 0 0 64 -2,-0.6 2,-0.6 -5,-0.1 -2,-0.1 -0.861 124.2 43.5 103.2-110.9 -4.7 4.1 -21.2 82 82 A R S S- 0 0 235 -2,-0.7 2,-0.5 2,-0.0 -2,-0.1 -0.648 74.4-152.8 -78.8 115.6 -1.8 4.6 -23.6 83 83 A L + 0 0 144 -2,-0.6 2,-0.2 2,-0.0 -3,-0.0 -0.775 31.5 143.0 -93.1 128.6 0.8 1.9 -23.2 84 84 A S 0 0 102 -2,-0.5 -2,-0.0 0, 0.0 0, 0.0 -0.767 360.0 360.0-167.8 116.5 4.4 2.7 -24.1 85 85 A L 0 0 219 -2,-0.2 -2,-0.0 0, 0.0 0, 0.0 -0.626 360.0 360.0 -77.1 360.0 7.6 1.6 -22.5