==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION 30-MAR-07 2EQP . COMPND 2 MOLECULE: TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.DANG,Y.MUTO,M.INOUE,T.KIGAWA,M.SHIROUZU,T.TERADA, . 50 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4286.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 20 40.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 4 8.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 4.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 10.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 18.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 2 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 133 0, 0.0 3,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -71.1 -6.0 4.1 -22.9 2 2 A S + 0 0 138 1,-0.3 2,-0.4 0, 0.0 0, 0.0 0.770 360.0 17.9-111.3 -55.6 -2.6 5.6 -22.1 3 3 A S S S+ 0 0 121 1,-0.1 -1,-0.3 2,-0.0 0, 0.0 -0.984 76.8 102.8-127.0 130.1 -2.9 7.1 -18.5 4 4 A G + 0 0 68 -2,-0.4 -1,-0.1 -3,-0.1 0, 0.0 0.193 30.4 119.5 160.1 64.9 -5.5 6.2 -15.9 5 5 A S S S+ 0 0 131 2,-0.1 -2,-0.0 0, 0.0 0, 0.0 0.777 85.4 32.0-107.6 -46.3 -4.5 3.9 -13.1 6 6 A S S S- 0 0 75 1,-0.1 4,-0.5 4,-0.1 2,-0.1 0.958 88.3-177.1 -77.8 -55.9 -5.1 5.9 -10.0 7 7 A G - 0 0 55 2,-0.1 2,-1.8 3,-0.1 -1,-0.1 -0.444 51.9 -11.6 89.4-165.2 -8.0 8.1 -11.1 8 8 A E S S- 0 0 193 1,-0.2 4,-0.1 -2,-0.1 -1,-0.1 -0.527 116.1 -64.5 -74.3 85.4 -9.7 10.9 -9.2 9 9 A Q S >> S+ 0 0 150 -2,-1.8 3,-1.1 1,-0.1 4,-0.6 0.838 80.8 167.7 34.9 47.0 -8.2 10.3 -5.8 10 10 A A H 3> S+ 0 0 62 -4,-0.5 4,-0.6 1,-0.3 3,-0.2 0.969 75.4 36.5 -49.8 -66.1 -10.0 6.9 -5.8 11 11 A P H 34 S+ 0 0 63 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.429 97.5 100.4 -69.8 2.9 -8.1 5.4 -2.8 12 12 A G H <4 S+ 0 0 40 -3,-1.1 -2,-0.2 -4,-0.1 -3,-0.1 0.969 98.5 6.2 -51.6 -83.2 -8.2 8.9 -1.3 13 13 A T H < S+ 0 0 152 -4,-0.6 -1,-0.1 -3,-0.2 -3,-0.1 0.974 119.8 76.9 -67.9 -56.9 -11.0 8.8 1.2 14 14 A A S < S- 0 0 53 -4,-0.6 3,-0.1 1,-0.1 0, 0.0 -0.162 86.4-115.3 -55.4 147.8 -11.8 5.0 0.9 15 15 A P - 0 0 116 0, 0.0 2,-0.3 0, 0.0 -1,-0.1 0.184 45.1 -65.7 -69.7-165.7 -9.4 2.7 2.7 16 16 A C - 0 0 48 4,-0.1 3,-0.1 1,-0.1 6,-0.1 -0.708 50.3-118.6 -91.7 138.9 -7.1 0.1 1.1 17 17 A S > - 0 0 89 -2,-0.3 3,-2.6 1,-0.2 -1,-0.1 -0.380 52.4 -68.1 -73.8 152.3 -8.5 -2.9 -0.8 18 18 A R T 3 S+ 0 0 245 1,-0.3 -1,-0.2 -2,-0.1 3,-0.1 -0.134 127.2 34.7 -41.9 110.4 -7.8 -6.4 0.4 19 19 A G T 3 S+ 0 0 26 1,-0.5 13,-0.4 -3,-0.1 -1,-0.3 -0.137 100.5 80.7 134.0 -40.2 -4.1 -6.8 -0.3 20 20 A S < - 0 0 22 -3,-2.6 -1,-0.5 11,-0.2 2,-0.4 -0.659 60.9-150.3 -99.2 155.6 -2.6 -3.3 0.3 21 21 A S E -A 30 0A 20 9,-2.6 9,-2.9 -2,-0.2 2,-0.1 -0.964 23.4-106.3-128.0 143.5 -1.8 -1.8 3.7 22 22 A W E -A 29 0A 127 -2,-0.4 2,-0.6 7,-0.3 7,-0.3 -0.428 28.6-157.0 -67.6 135.9 -1.8 1.8 4.9 23 23 A S E > -A 28 0A 0 5,-1.5 5,-1.9 1,-0.2 4,-0.4 -0.884 13.4-175.3-120.9 100.0 1.7 3.4 5.3 24 24 A A T > 5S+ 0 0 76 -2,-0.6 3,-0.8 1,-0.2 -1,-0.2 0.884 87.5 58.4 -58.0 -40.5 1.8 6.3 7.6 25 25 A D T 3 5S+ 0 0 138 1,-0.3 -1,-0.2 2,-0.1 -2,-0.0 0.891 120.0 28.4 -57.0 -41.7 5.5 6.9 6.7 26 26 A L T 3 5S- 0 0 79 -3,-0.3 -1,-0.3 2,-0.3 -2,-0.2 0.257 102.4-131.6-102.8 9.7 4.5 7.3 3.1 27 27 A D T < 5S+ 0 0 122 -3,-0.8 2,-0.3 -4,-0.4 -3,-0.2 0.811 78.8 89.5 42.7 34.4 1.1 8.6 3.9 28 28 A K E > - 0 0 83 -2,-0.3 3,-3.0 -11,-0.3 4,-0.7 -0.607 24.4-112.7 -90.2 150.4 0.3 -3.0 -2.4 32 32 A C H >> S+ 0 0 54 -13,-0.4 4,-3.0 1,-0.3 3,-0.6 0.824 109.5 82.3 -47.6 -34.6 1.5 -6.5 -1.6 33 33 A A H 3> S+ 0 0 40 1,-0.3 4,-0.6 2,-0.2 -1,-0.3 0.725 97.3 43.5 -44.6 -22.1 3.5 -6.3 -4.8 34 34 A S H <> S+ 0 0 19 -3,-3.0 4,-1.9 2,-0.1 -1,-0.3 0.798 111.0 51.2 -93.7 -35.9 6.0 -4.4 -2.6 35 35 A C H << S+ 0 0 32 -4,-0.7 -2,-0.2 -3,-0.6 -3,-0.1 0.847 103.2 61.0 -69.9 -35.0 5.8 -6.7 0.4 36 36 A R H < S+ 0 0 195 -4,-3.0 -1,-0.2 1,-0.2 -2,-0.1 0.928 119.1 26.6 -57.7 -48.1 6.5 -9.8 -1.8 37 37 A A H < S+ 0 0 81 -4,-0.6 -1,-0.2 -5,-0.3 -2,-0.2 0.686 134.5 38.7 -87.9 -21.2 9.8 -8.4 -2.9 38 38 A R < + 0 0 133 -4,-1.9 3,-0.4 -6,-0.3 -1,-0.2 -0.722 58.5 169.7-133.6 83.8 10.3 -6.4 0.2 39 39 A P + 0 0 93 0, 0.0 -4,-0.1 0, 0.0 -1,-0.1 0.536 68.3 84.3 -69.8 -5.5 9.1 -8.2 3.4 40 40 A H + 0 0 182 -3,-0.1 2,-0.3 -5,-0.0 -5,-0.1 -0.054 63.7 135.6 -88.3 33.3 10.8 -5.5 5.4 41 41 A S > - 0 0 9 -3,-0.4 4,-0.9 1,-0.1 5,-0.1 -0.646 44.0-163.1 -86.0 138.5 7.7 -3.3 5.0 42 42 A D H > S+ 0 0 83 -2,-0.3 4,-2.1 2,-0.2 5,-0.4 0.722 88.3 63.9 -89.6 -25.5 6.3 -1.4 8.0 43 43 A F H 4 S+ 0 0 10 1,-0.2 -1,-0.2 2,-0.2 -21,-0.1 0.746 116.1 31.0 -69.6 -23.5 3.0 -0.7 6.4 44 44 A C H > S+ 0 0 31 3,-0.1 4,-1.3 -23,-0.1 -1,-0.2 0.656 123.8 47.2-105.3 -24.7 2.3 -4.5 6.4 45 45 A L H < S+ 0 0 104 -4,-0.9 -3,-0.2 2,-0.2 -2,-0.2 0.934 115.6 41.1 -82.4 -52.5 4.3 -5.4 9.5 46 46 A G T < S+ 0 0 70 -4,-2.1 -3,-0.2 1,-0.2 -1,-0.1 0.758 119.9 47.7 -67.4 -24.3 3.1 -2.8 11.9 47 47 A C T 4 S+ 0 0 80 -5,-0.4 2,-0.2 -25,-0.1 -1,-0.2 0.888 104.9 65.4 -82.5 -43.6 -0.5 -3.3 10.6 48 48 A A S < S- 0 0 54 -4,-1.3 -4,-0.0 1,-0.1 -27,-0.0 -0.536 92.0-115.7 -82.1 147.2 -0.5 -7.1 10.7 49 49 A A 0 0 121 1,-0.3 -1,-0.1 -2,-0.2 -4,-0.0 0.901 360.0 360.0 -44.7 -50.8 -0.3 -8.9 14.0 50 50 A A 0 0 104 -6,-0.1 -1,-0.3 -3,-0.0 -4,-0.1 0.409 360.0 360.0-102.4 360.0 3.1 -10.4 13.0