==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=30-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 27-OCT-05 2ESZ . COMPND 2 MOLECULE: ENVELOPE POLYPROTEIN GP160; . SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS 1; . AUTHOR O.ROSEN,M.SHARON,A.O.SAMSON,S.R.QUADT,J.ANGLISTER . 19 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2160.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 10 52.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 15.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 26.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 1 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 3 A T 0 0 155 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 56.5 11.7 -3.7 -3.6 2 4 A R + 0 0 194 2,-0.0 16,-3.3 0, 0.0 17,-0.4 -0.734 360.0 163.6 -90.2 130.5 9.7 -3.7 -0.3 3 5 A K - 0 0 122 -2,-0.4 2,-0.7 14,-0.3 14,-0.2 -0.998 32.3-140.8-147.8 145.3 6.2 -2.1 -0.4 4 6 A S + 0 0 74 -2,-0.3 12,-0.9 12,-0.2 2,-0.7 -0.864 25.7 172.1-111.3 99.4 3.1 -2.2 1.8 5 7 A I E +A 15 0A 93 -2,-0.7 2,-0.5 10,-0.2 10,-0.1 -0.901 1.7 169.4-111.9 107.0 -0.1 -2.4 -0.3 6 8 A H E -A 14 0A 151 8,-0.9 2,-0.7 -2,-0.7 8,-0.7 -0.946 10.4-172.8-121.6 112.4 -3.3 -3.0 1.7 7 9 A I + 0 0 84 -2,-0.5 6,-0.1 1,-0.1 3,-0.1 -0.888 19.2 152.0-107.7 108.1 -6.7 -2.6 0.0 8 10 A G + 0 0 52 -2,-0.7 -1,-0.1 4,-0.0 4,-0.0 0.773 56.4 12.5 -96.5 -94.6 -9.6 -2.8 2.4 9 11 A P S > S- 0 0 86 0, 0.0 3,-0.6 0, 0.0 2,-0.3 0.093 92.1 -85.0 -72.7-169.5 -12.9 -0.9 1.5 10 12 A G T 3 S+ 0 0 70 1,-0.2 -3,-0.0 -3,-0.1 0, 0.0 -0.201 122.5 42.0 -94.7 43.2 -13.8 0.6 -1.8 11 13 A R T 3 S+ 0 0 225 -2,-0.3 2,-0.4 1,-0.1 -1,-0.2 0.105 88.0 101.5-175.3 37.0 -12.0 3.9 -1.2 12 14 A A < + 0 0 25 -3,-0.6 2,-0.3 2,-0.0 -1,-0.1 -0.998 32.0 169.3-136.2 136.2 -8.6 3.1 0.5 13 15 A F + 0 0 160 -2,-0.4 2,-0.6 -6,-0.1 -6,-0.1 -0.823 4.3 179.4-150.0 105.1 -5.1 3.1 -0.9 14 16 A Y E +A 6 0A 174 -8,-0.7 -8,-0.9 -2,-0.3 2,-0.5 -0.925 6.3 168.8-112.1 114.9 -2.0 2.8 1.3 15 17 A T E +A 5 0A 87 -2,-0.6 2,-0.3 -10,-0.1 -10,-0.2 -0.852 18.3 135.7-129.0 96.6 1.4 2.8 -0.5 16 18 A T + 0 0 100 -12,-0.9 -12,-0.2 -2,-0.5 2,-0.2 -0.918 25.9 99.2-145.4 114.5 4.4 3.2 1.8 17 19 A G S S- 0 0 51 -2,-0.3 -14,-0.3 1,-0.2 -2,-0.0 -0.625 75.7 -53.4-158.1-142.3 7.6 1.1 1.6 18 20 A E 0 0 111 -16,-3.3 -1,-0.2 -2,-0.2 -15,-0.1 0.945 360.0 360.0 -80.2 -83.5 11.1 1.1 0.3 19 21 A I 0 0 146 -17,-0.4 -16,-0.1 -3,-0.1 -2,-0.1 0.616 360.0 360.0-127.8 360.0 11.1 1.9 -3.5