==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 02-AUG-00 1FHM . COMPND 2 MOLECULE: RUBREDOXIN; . SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM PASTEURIANUM; . AUTHOR T.MIN,C.E.ERGENEKAN,M.K.EIDSNESS,T.ICHIYE,C.KANG . 53 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3507.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 60.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 20.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 5.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 6 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 17.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 4 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 143 0, 0.0 2,-0.2 0, 0.0 15,-0.1 0.000 360.0 360.0 360.0 149.6 19.2 26.7 7.4 2 2 A K - 0 0 71 1,-0.1 28,-0.4 13,-0.1 2,-0.1 -0.585 360.0-113.8 -97.7 159.0 16.1 27.0 9.4 3 3 A K - 0 0 98 49,-0.3 49,-2.7 -2,-0.2 2,-0.3 -0.470 27.4-154.7 -77.5 154.3 15.5 28.3 12.9 4 4 A Y E -AB 13 51A 37 9,-1.9 9,-3.5 47,-0.2 2,-0.4 -0.978 4.8-148.8-129.3 145.6 14.3 25.8 15.6 5 5 A T E -AB 12 50A 29 45,-2.7 45,-2.6 -2,-0.3 2,-0.6 -0.911 20.0-118.1-120.7 146.5 12.4 26.7 18.7 6 6 A C E > - B 0 49A 2 5,-3.6 4,-2.1 -2,-0.4 43,-0.2 -0.685 21.2-155.5 -72.2 121.0 12.3 25.1 22.1 7 7 A T T 4 S+ 0 0 72 41,-2.4 -1,-0.1 -2,-0.6 42,-0.1 0.542 88.3 55.2 -83.6 -2.5 8.7 24.0 22.5 8 8 A V T 4 S+ 0 0 83 40,-0.1 -1,-0.2 3,-0.1 41,-0.1 0.865 130.1 5.0 -90.3 -43.7 9.0 24.1 26.3 9 9 A C T 4 S- 0 0 61 2,-0.1 -2,-0.2 35,-0.0 -4,-0.0 0.605 94.8-112.7-118.4 -13.3 10.2 27.6 26.8 10 10 A G < + 0 0 44 -4,-2.1 -3,-0.1 1,-0.3 0, 0.0 0.366 56.4 157.5 97.4 -10.0 10.2 29.4 23.4 11 11 A Y - 0 0 28 -6,-0.1 -5,-3.6 1,-0.1 2,-0.6 -0.246 35.3-136.2 -49.7 144.0 14.0 29.8 23.0 12 12 A I E -A 5 0A 99 -7,-0.2 2,-0.8 37,-0.1 -7,-0.2 -0.913 7.2-151.0-112.4 114.9 15.0 30.1 19.5 13 13 A Y E -A 4 0A 0 -9,-3.5 -9,-1.9 -2,-0.6 17,-0.1 -0.758 15.7-169.7 -82.7 117.3 17.9 28.3 18.0 14 14 A N >> - 0 0 25 -2,-0.8 4,-2.0 4,-0.4 3,-1.2 -0.923 15.0-153.7-108.6 114.1 19.2 30.5 15.2 15 15 A P T 34 S+ 0 0 4 0, 0.0 12,-4.0 0, 0.0 13,-0.6 0.828 94.1 60.4 -61.4 -28.6 21.9 28.7 13.0 16 16 A E T 34 S+ 0 0 151 10,-0.2 13,-0.0 1,-0.2 -3,-0.0 0.841 116.9 32.0 -65.4 -29.6 23.5 32.0 12.0 17 17 A D T <4 S- 0 0 100 -3,-1.2 -1,-0.2 9,-0.1 7,-0.1 0.718 91.7-172.2 -95.7 -23.5 24.3 32.7 15.7 18 18 A G < - 0 0 6 -4,-2.0 -4,-0.4 7,-0.2 7,-0.2 -0.173 43.2 -87.8 55.9-157.9 24.8 29.1 16.9 19 19 A D B > > +C 24 0B 13 5,-2.3 5,-2.1 -6,-0.1 3,-1.8 -0.566 54.2 172.1-143.5 67.6 25.1 28.6 20.7 20 20 A P G > 5 + 0 0 73 0, 0.0 3,-1.9 0, 0.0 5,-0.1 0.795 69.5 64.6 -59.7 -29.6 28.9 29.1 20.9 21 21 A D G 3 5S+ 0 0 151 1,-0.3 4,-0.1 2,-0.1 -3,-0.0 0.734 109.5 42.1 -64.8 -23.8 29.1 29.2 24.8 22 22 A N G < 5S- 0 0 96 -3,-1.8 -1,-0.3 2,-0.2 3,-0.1 0.012 130.2 -92.7-111.1 24.8 27.9 25.6 24.6 23 23 A G T < 5S+ 0 0 57 -3,-1.9 2,-0.7 1,-0.2 -2,-0.1 0.617 86.9 122.6 83.6 11.0 30.1 24.5 21.8 24 24 A V B < -C 19 0B 5 -5,-2.1 -5,-2.3 9,-0.1 -1,-0.2 -0.903 51.4-147.6-112.9 112.3 27.8 25.1 18.8 25 25 A N > - 0 0 103 -2,-0.7 3,-1.6 -7,-0.2 -7,-0.2 -0.399 28.5 -85.8 -76.8 153.9 29.4 27.4 16.3 26 26 A P T 3 S+ 0 0 82 0, 0.0 -10,-0.2 0, 0.0 -9,-0.1 -0.255 115.9 34.9 -44.2 136.4 27.6 29.9 14.1 27 27 A G T 3 S+ 0 0 43 -12,-4.0 2,-0.6 1,-0.3 -11,-0.2 0.466 80.2 134.5 92.0 1.6 26.5 28.1 11.0 28 28 A T < - 0 0 31 -3,-1.6 -1,-0.3 -13,-0.6 -10,-0.2 -0.753 54.2-130.3 -91.8 127.2 25.7 24.8 12.4 29 29 A D >> - 0 0 36 -2,-0.6 3,-1.1 1,-0.1 4,-0.5 -0.413 22.7-117.3 -58.5 141.3 22.4 23.3 11.2 30 30 A F G >4 S+ 0 0 15 -28,-0.4 3,-1.5 1,-0.2 -1,-0.1 0.885 114.3 61.8 -52.2 -37.9 20.3 22.1 14.2 31 31 A K G 34 S+ 0 0 150 1,-0.3 -1,-0.2 4,-0.0 4,-0.1 0.842 104.3 49.5 -46.2 -45.2 20.5 18.5 12.8 32 32 A D G <4 S+ 0 0 97 -3,-1.1 -1,-0.3 2,-0.1 -2,-0.2 0.384 79.9 112.8 -84.5 -5.1 24.2 18.7 13.3 33 33 A I S << S- 0 0 3 -3,-1.5 -9,-0.1 -4,-0.5 4,-0.0 -0.535 86.9 -92.8 -68.3 135.3 24.2 19.9 16.8 34 34 A P > - 0 0 75 0, 0.0 3,-2.4 0, 0.0 -1,-0.1 -0.243 35.9-124.4 -47.4 136.0 25.6 17.1 19.2 35 35 A D T 3 S+ 0 0 136 1,-0.3 11,-0.3 -3,-0.1 -2,-0.1 0.450 106.2 63.3 -73.8 0.0 22.6 15.2 20.4 36 36 A D T 3 S+ 0 0 140 9,-0.1 -1,-0.3 10,-0.1 2,-0.1 0.383 77.2 116.4 -96.8 -0.6 23.5 15.7 24.0 37 37 A W < - 0 0 17 -3,-2.4 9,-0.8 -4,-0.0 2,-0.3 -0.378 50.6-159.1 -61.7 143.6 23.1 19.5 23.7 38 38 A V B -D 45 0C 70 7,-0.2 7,-0.2 8,-0.1 6,-0.1 -0.861 34.3 -75.9-125.2 160.3 20.2 21.0 25.7 39 39 A C > - 0 0 2 5,-3.3 4,-1.9 -2,-0.3 5,-0.0 -0.361 39.8-139.9 -55.5 124.1 18.2 24.2 25.5 40 40 A P T 4 S+ 0 0 46 0, 0.0 -1,-0.2 0, 0.0 -21,-0.0 0.680 97.5 40.0 -64.7 -14.7 20.5 27.0 26.8 41 41 A L T 4 S+ 0 0 125 3,-0.1 -2,-0.1 0, 0.0 -3,-0.0 0.867 133.2 12.7-106.0 -45.0 17.6 28.7 28.6 42 42 A C T 4 S- 0 0 52 2,-0.1 -3,-0.0 0, 0.0 0, 0.0 0.561 90.6-126.5-112.8 -6.7 15.5 25.9 30.1 43 43 A G < + 0 0 41 -4,-1.9 2,-0.1 1,-0.2 0, 0.0 0.520 56.3 140.3 85.7 3.3 17.7 22.8 29.8 44 44 A V - 0 0 38 1,-0.1 -5,-3.3 -6,-0.1 -1,-0.2 -0.385 54.0 -95.8 -78.3 166.1 15.4 20.4 28.0 45 45 A G B > -D 38 0C 26 -7,-0.2 3,-1.9 1,-0.1 -7,-0.2 -0.149 31.8 -99.5 -77.4 170.2 16.7 18.1 25.3 46 46 A K G > S+ 0 0 27 -9,-0.8 3,-2.5 -11,-0.3 -1,-0.1 0.815 113.4 75.1 -56.9 -32.2 16.8 18.6 21.5 47 47 A D G 3 S+ 0 0 136 1,-0.3 -1,-0.3 -41,-0.0 -2,-0.0 0.546 90.4 58.2 -61.4 -7.2 13.7 16.3 21.2 48 48 A Q G < S+ 0 0 77 -3,-1.9 -41,-2.4 2,-0.0 -1,-0.3 0.389 90.0 94.7 -98.4 3.4 11.5 19.2 22.4 49 49 A F E < -B 6 0A 20 -3,-2.5 2,-0.4 -43,-0.2 -43,-0.2 -0.597 56.3-165.4 -96.5 150.0 12.7 21.5 19.6 50 50 A E E -B 5 0A 110 -45,-2.6 -45,-2.7 -2,-0.2 -2,-0.0 -0.995 27.5-100.1-139.7 148.7 10.8 21.9 16.4 51 51 A E E -B 4 0A 90 -2,-0.4 2,-1.0 -47,-0.2 -47,-0.2 -0.313 37.7-117.4 -61.5 133.2 11.6 23.4 13.1 52 52 A V 0 0 60 -49,-2.7 -49,-0.3 1,-0.2 -1,-0.1 -0.815 360.0 360.0 -85.5 106.6 10.3 26.8 12.6 53 53 A E 0 0 211 -2,-1.0 -1,-0.2 -51,-0.1 -49,-0.0 -0.622 360.0 360.0 149.7 360.0 7.8 26.3 9.7