==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=28-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CYTOKINE 31-JAN-96 1FIM . COMPND 2 MOLECULE: MACROPHAGE MIGRATION INHIBITORY FACTOR; . SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; . AUTHOR M.SUZUKI,H.SUGIMOTO,A.NAKAGAWA,I.TANAKA . 103 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6106.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 69 67.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 14 13.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 9 8.7 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 8 7.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 9 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 27.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A P 0 0 23 0, 0.0 37,-1.8 0, 0.0 2,-0.4 0.000 360.0 360.0 360.0 174.9 31.9 3.9 14.5 2 2 A A E -aB 38 62A 30 60,-2.3 60,-3.2 35,-0.2 2,-0.5 -0.995 360.0-161.3-130.9 129.3 31.5 6.3 17.4 3 3 A F E -aB 39 61A 0 35,-2.4 37,-2.1 -2,-0.4 2,-0.5 -0.953 8.4-169.4-113.4 118.3 28.1 7.0 19.2 4 4 A I E -aB 40 60A 34 56,-3.3 56,-2.0 -2,-0.5 2,-0.5 -0.922 1.4-169.1-109.0 134.2 27.9 10.1 21.3 5 5 A V E -aB 41 59A 0 35,-2.8 37,-2.7 -2,-0.5 2,-0.5 -0.980 4.3-171.0-124.9 121.3 24.9 10.8 23.6 6 6 A N E +aB 42 58A 57 52,-2.4 52,-2.6 -2,-0.5 2,-0.3 -0.965 22.1 169.2-108.7 120.4 24.3 14.2 25.3 7 7 A T E - B 0 57A 0 35,-2.7 38,-2.3 -2,-0.5 50,-0.2 -0.942 43.3-146.2-137.1 151.0 21.5 14.0 27.9 8 8 A N + 0 0 30 48,-1.2 49,-0.1 -2,-0.3 3,-0.1 0.399 68.8 109.9 -92.3 1.5 19.9 16.1 30.6 9 9 A V S S- 0 0 8 47,-0.4 35,-2.5 1,-0.1 36,-0.2 -0.510 80.6 -95.7 -74.0 145.1 19.1 13.0 32.8 10 10 A P > - 0 0 74 0, 0.0 3,-1.7 0, 0.0 4,-0.3 -0.234 24.8-117.3 -60.5 151.5 21.2 12.7 36.0 11 11 A R G > S+ 0 0 152 1,-0.3 3,-1.2 2,-0.2 -2,-0.1 0.828 115.1 58.5 -58.8 -30.8 24.4 10.5 36.1 12 12 A A G 3 S+ 0 0 94 1,-0.3 -1,-0.3 3,-0.0 -3,-0.0 0.592 94.4 63.4 -77.9 -9.7 22.7 8.4 38.8 13 13 A S G < S+ 0 0 44 -3,-1.7 -1,-0.3 2,-0.1 -2,-0.2 0.477 82.9 95.1 -90.6 -0.4 19.8 7.6 36.5 14 14 A V S < S- 0 0 15 -3,-1.2 73,-0.1 -4,-0.3 3,-0.1 -0.816 80.2-125.9 -93.6 118.8 22.3 5.8 34.2 15 15 A P > - 0 0 36 0, 0.0 3,-1.6 0, 0.0 2,-0.4 -0.174 22.2-101.2 -60.1 155.5 22.4 2.0 35.0 16 16 A E T 3 S+ 0 0 203 1,-0.3 0, 0.0 2,-0.1 0, 0.0 -0.632 115.2 28.0 -77.0 130.7 25.5 0.0 35.8 17 17 A G T 3> S+ 0 0 33 -2,-0.4 4,-2.9 -3,-0.1 -1,-0.3 0.411 83.4 120.0 96.4 -4.6 26.3 -1.8 32.5 18 18 A F H <> S+ 0 0 0 -3,-1.6 4,-2.7 2,-0.2 5,-0.2 0.907 76.8 46.7 -60.4 -43.5 24.7 0.9 30.2 19 19 A L H > S+ 0 0 72 -4,-0.3 4,-2.0 2,-0.2 -1,-0.2 0.873 115.0 47.9 -68.3 -33.4 27.9 1.6 28.3 20 20 A S H > S+ 0 0 66 2,-0.2 4,-2.3 3,-0.2 -2,-0.2 0.921 114.0 46.2 -71.2 -43.7 28.6 -2.1 27.9 21 21 A E H X S+ 0 0 57 -4,-2.9 4,-2.4 2,-0.2 -2,-0.2 0.978 113.9 46.7 -61.2 -58.1 25.0 -2.8 26.8 22 22 A L H X S+ 0 0 0 -4,-2.7 4,-2.8 1,-0.2 5,-0.2 0.926 111.6 53.5 -50.5 -45.4 24.9 0.1 24.3 23 23 A T H X S+ 0 0 37 -4,-2.0 4,-1.9 1,-0.2 -1,-0.2 0.908 110.6 45.6 -55.7 -48.2 28.4 -1.0 23.0 24 24 A Q H X S+ 0 0 122 -4,-2.3 4,-2.0 2,-0.2 -1,-0.2 0.826 111.2 54.4 -66.8 -35.1 27.1 -4.6 22.3 25 25 A Q H X S+ 0 0 39 -4,-2.4 4,-3.1 2,-0.2 5,-0.2 0.962 107.8 47.2 -65.4 -50.1 24.0 -3.2 20.7 26 26 A L H X S+ 0 0 0 -4,-2.8 4,-2.7 1,-0.2 6,-0.4 0.866 109.8 55.0 -60.1 -35.8 25.9 -1.1 18.2 27 27 A A H X S+ 0 0 22 -4,-1.9 4,-1.1 -5,-0.2 5,-0.4 0.906 113.1 42.3 -63.5 -40.0 28.2 -4.1 17.5 28 28 A Q H >< S+ 0 0 139 -4,-2.0 3,-0.8 -3,-0.2 -2,-0.2 0.988 116.1 47.4 -67.8 -59.7 25.0 -6.1 16.7 29 29 A A H 3< S+ 0 0 26 -4,-3.1 -2,-0.2 1,-0.2 -3,-0.2 0.886 120.8 36.0 -50.2 -45.8 23.3 -3.4 14.7 30 30 A T H 3< S- 0 0 19 -4,-2.7 -1,-0.2 -5,-0.2 -2,-0.2 0.584 97.5-128.0 -89.6 -9.0 26.3 -2.5 12.6 31 31 A G << + 0 0 66 -4,-1.1 -3,-0.2 -3,-0.8 -4,-0.1 0.650 68.3 128.3 70.8 10.8 27.9 -5.9 12.1 32 32 A K - 0 0 99 -5,-0.4 -1,-0.3 -6,-0.4 -2,-0.2 -0.773 65.3-108.8 -99.7 145.1 31.2 -4.5 13.4 33 33 A P > - 0 0 59 0, 0.0 3,-3.5 0, 0.0 4,-0.2 -0.463 33.5-106.7 -71.8 148.5 33.2 -6.1 16.2 34 34 A A G > S+ 0 0 61 1,-0.3 3,-1.6 2,-0.2 -2,-0.0 0.744 117.0 73.7 -43.5 -26.9 33.3 -4.3 19.6 35 35 A Q G 3 S+ 0 0 146 1,-0.3 -1,-0.3 3,-0.0 -3,-0.0 0.756 94.9 48.8 -60.7 -28.7 36.9 -3.4 18.7 36 36 A Y G < S+ 0 0 143 -3,-3.5 2,-0.4 2,-0.0 -1,-0.3 0.270 99.2 90.1 -98.5 15.6 35.7 -0.9 16.1 37 37 A I < - 0 0 22 -3,-1.6 2,-0.4 -4,-0.2 -35,-0.2 -0.876 46.4-177.8-119.3 142.6 33.2 0.9 18.4 38 38 A A E -a 2 0A 56 -37,-1.8 -35,-2.4 -2,-0.4 2,-0.4 -0.993 7.2-167.0-135.4 137.8 33.4 3.8 20.8 39 39 A V E -a 3 0A 29 -2,-0.4 2,-0.4 -37,-0.2 -35,-0.2 -0.960 3.4-174.3-125.7 138.9 30.6 5.1 23.0 40 40 A H E -a 4 0A 106 -37,-2.1 -35,-2.8 -2,-0.4 2,-0.5 -0.960 3.0-172.5-138.0 115.2 30.6 8.4 24.9 41 41 A V E -a 5 0A 24 -2,-0.4 -35,-0.2 -37,-0.2 -37,-0.0 -0.953 1.6-172.1-113.6 125.0 27.7 9.2 27.3 42 42 A V E +a 6 0A 30 -37,-2.7 -35,-2.7 -2,-0.5 3,-0.3 -0.915 11.7 179.3-120.2 101.1 27.5 12.7 28.8 43 43 A P + 0 0 24 0, 0.0 -35,-0.1 0, 0.0 -32,-0.1 -0.248 53.6 47.6 -91.7-177.9 24.8 13.1 31.5 44 44 A D S S+ 0 0 94 -35,-2.5 -36,-0.2 1,-0.2 2,-0.2 0.769 75.5 161.3 60.7 34.6 23.8 16.1 33.6 45 45 A Q - 0 0 76 -38,-2.3 2,-0.9 -3,-0.3 -1,-0.2 -0.572 45.5-124.6 -91.9 151.5 23.6 18.5 30.7 46 46 A L + 0 0 177 -2,-0.2 2,-0.3 2,-0.0 -1,-0.0 -0.792 55.5 144.5 -89.2 105.9 21.9 21.9 30.6 47 47 A X - 0 0 33 -2,-0.9 2,-0.3 6,-0.1 9,-0.0 -0.998 39.7-158.3-148.8 147.4 19.6 21.5 27.5 48 48 A T - 0 0 107 -2,-0.3 2,-0.3 5,-0.1 5,-0.2 -0.892 14.7-172.1-115.7 153.7 16.2 22.5 26.1 49 49 A F B > S-D 52 0B 29 3,-2.3 3,-2.2 -2,-0.3 5,-0.3 -0.953 72.0 -6.7-150.5 126.8 14.6 20.4 23.3 50 50 A S T 3 S- 0 0 111 -2,-0.3 3,-0.1 1,-0.3 43,-0.0 0.826 135.5 -50.4 51.1 37.2 11.4 21.5 21.4 51 51 A G T 3 S+ 0 0 67 1,-0.2 2,-0.3 3,-0.0 -1,-0.3 0.234 120.8 77.3 93.6 -16.8 11.1 24.3 23.9 52 52 A T B < S-D 49 0B 64 -3,-2.2 -3,-2.3 2,-0.1 -1,-0.2 -0.857 70.4-130.4-130.7 168.9 11.5 22.5 27.2 53 53 A S + 0 0 87 -2,-0.3 3,-0.1 -5,-0.2 -6,-0.1 0.022 59.4 136.2-100.8 28.3 13.9 21.0 29.5 54 54 A D S S- 0 0 100 -5,-0.3 -46,-0.1 1,-0.2 -2,-0.1 -0.326 78.1 -65.2 -63.4 158.0 12.0 17.8 29.9 55 55 A P S S+ 0 0 60 0, 0.0 35,-0.5 0, 0.0 2,-0.3 -0.220 78.2 152.8 -50.2 131.0 14.3 14.8 29.8 56 56 A C - 0 0 0 -3,-0.1 -48,-1.2 33,-0.1 -47,-0.4 -0.908 32.7-141.8-150.8 177.8 15.8 14.6 26.2 57 57 A A E -Bc 7 94A 0 36,-2.2 38,-2.9 -2,-0.3 2,-0.6 -0.943 2.8-163.4-154.0 125.0 18.9 13.4 24.3 58 58 A L E +Bc 6 95A 84 -52,-2.6 -52,-2.4 -2,-0.3 2,-0.3 -0.960 29.5 173.2-105.6 118.8 20.9 14.8 21.4 59 59 A C E -Bc 5 96A 8 36,-3.4 38,-2.3 -2,-0.6 2,-0.3 -0.822 20.5-163.9-126.5 163.7 23.0 12.0 19.9 60 60 A S E -Bc 4 97A 22 -56,-2.0 -56,-3.3 -2,-0.3 2,-0.5 -0.990 7.0-156.1-146.9 138.0 25.3 11.5 16.9 61 61 A L E -Bc 3 98A 2 36,-2.6 38,-2.8 -2,-0.3 2,-0.5 -0.994 12.8-161.3-112.2 126.4 26.6 8.3 15.3 62 62 A H E +Bc 2 99A 59 -60,-3.2 -60,-2.3 -2,-0.5 2,-0.3 -0.958 15.4 172.1-114.2 120.2 29.9 8.7 13.3 63 63 A S E - c 0 100A 29 36,-2.4 38,-2.0 -2,-0.5 2,-0.8 -0.815 41.4-123.6-124.4 160.8 30.8 6.1 10.7 64 64 A I S S+ 0 0 125 -2,-0.3 2,-0.3 37,-0.2 36,-0.1 -0.573 94.6 40.7 -98.8 60.0 33.5 5.6 8.0 65 65 A G S S- 0 0 36 -2,-0.8 2,-0.4 34,-0.1 -2,-0.3 -0.886 96.9 -84.2 173.0 165.2 30.9 5.0 5.3 66 66 A K - 0 0 163 -2,-0.3 2,-0.2 34,-0.1 -2,-0.1 -0.793 41.0-135.6 -90.3 131.5 27.5 6.4 4.2 67 67 A I - 0 0 30 -2,-0.4 2,-0.2 -4,-0.1 31,-0.0 -0.602 20.1-129.6 -84.5 145.2 24.6 4.8 6.1 68 68 A G > - 0 0 23 -2,-0.2 4,-2.7 1,-0.1 5,-0.2 -0.545 23.8-104.0 -90.5 170.0 21.6 3.8 3.9 69 69 A G H > S+ 0 0 50 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.856 121.6 50.5 -61.0 -37.2 18.0 4.8 4.5 70 70 A A H > S+ 0 0 77 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.909 111.8 48.4 -68.4 -39.2 17.1 1.3 5.8 71 71 A Q H > S+ 0 0 85 2,-0.2 4,-3.5 1,-0.2 5,-0.3 0.935 109.2 52.6 -64.1 -46.6 20.1 1.4 8.2 72 72 A N H X S+ 0 0 61 -4,-2.7 4,-2.8 2,-0.2 5,-0.3 0.951 112.7 45.7 -51.8 -54.3 19.1 4.9 9.4 73 73 A R H X S+ 0 0 175 -4,-2.2 4,-2.4 1,-0.2 5,-0.2 0.954 115.9 45.5 -54.6 -53.7 15.6 3.7 10.2 74 74 A N H X S+ 0 0 94 -4,-2.7 4,-1.8 1,-0.2 -1,-0.2 0.843 115.1 47.4 -61.9 -35.3 16.9 0.5 11.8 75 75 A Y H X S+ 0 0 12 -4,-3.5 4,-3.3 2,-0.2 5,-0.2 0.931 112.1 48.4 -72.1 -46.3 19.5 2.3 13.9 76 76 A S H X S+ 0 0 26 -4,-2.8 4,-3.6 -5,-0.3 5,-0.4 0.945 112.5 48.7 -58.8 -52.0 17.2 5.1 15.1 77 77 A K H X S+ 0 0 152 -4,-2.4 4,-2.1 -5,-0.3 5,-0.2 0.950 117.2 41.1 -52.9 -55.1 14.5 2.6 16.2 78 78 A L H X S+ 0 0 57 -4,-1.8 4,-1.8 -5,-0.2 -2,-0.2 0.936 120.7 42.8 -61.1 -48.5 16.9 0.4 18.0 79 79 A L H X S+ 0 0 0 -4,-3.3 4,-2.3 2,-0.2 -2,-0.2 0.885 113.7 48.3 -70.1 -40.8 18.9 3.3 19.6 80 80 A C H X S+ 0 0 24 -4,-3.6 4,-3.1 -5,-0.2 5,-0.2 0.937 113.1 50.0 -64.8 -42.4 15.9 5.5 20.5 81 81 A G H X S+ 0 0 26 -4,-2.1 4,-2.3 -5,-0.4 5,-0.2 0.860 110.4 48.9 -63.2 -38.4 14.2 2.5 22.2 82 82 A L H X S+ 0 0 18 -4,-1.8 4,-2.6 -5,-0.2 5,-0.3 0.960 115.3 44.6 -67.0 -46.9 17.2 1.5 24.1 83 83 A L H X S+ 0 0 0 -4,-2.3 4,-2.0 2,-0.2 -2,-0.2 0.870 114.0 48.2 -65.8 -42.5 17.7 5.1 25.4 84 84 A S H X S+ 0 0 15 -4,-3.1 4,-1.6 4,-0.2 5,-0.4 0.974 115.8 44.7 -66.4 -46.3 14.1 5.7 26.2 85 85 A D H < S+ 0 0 114 -4,-2.3 -2,-0.2 -5,-0.2 -3,-0.2 0.950 121.1 35.3 -62.6 -54.1 13.8 2.5 28.1 86 86 A R H < S+ 0 0 84 -4,-2.6 -1,-0.2 -5,-0.2 -3,-0.2 0.844 131.8 28.9 -72.3 -31.2 17.0 2.6 30.1 87 87 A L H < S- 0 0 4 -4,-2.0 -1,-0.2 -5,-0.3 -2,-0.2 0.396 101.9-124.4-110.8 -0.0 17.1 6.4 30.7 88 88 A H < + 0 0 150 -4,-1.6 2,-0.4 1,-0.2 -4,-0.2 0.961 54.7 146.7 53.7 66.1 13.4 7.1 30.7 89 89 A I - 0 0 7 -5,-0.4 -1,-0.2 -6,-0.2 -33,-0.1 -0.938 57.4-102.5-124.3 144.9 13.1 9.8 28.0 90 90 A S > - 0 0 47 -35,-0.5 3,-2.6 -2,-0.4 4,-0.1 -0.515 31.7-122.0 -69.1 136.8 10.0 10.0 25.7 91 91 A P G > S+ 0 0 84 0, 0.0 3,-1.5 0, 0.0 -1,-0.1 0.861 111.8 60.0 -50.4 -35.8 10.9 8.4 22.3 92 92 A D G 3 S+ 0 0 129 1,-0.3 -2,-0.1 3,-0.0 -36,-0.0 0.462 99.4 59.8 -74.9 4.7 10.0 11.7 20.6 93 93 A R G < S+ 0 0 22 -3,-2.6 -36,-2.2 -13,-0.1 2,-0.6 0.234 82.5 89.4-114.3 11.3 12.7 13.4 22.6 94 94 A V E < -c 57 0A 11 -3,-1.5 2,-0.4 -38,-0.2 -36,-0.2 -0.947 57.7-171.6-109.7 112.8 15.7 11.4 21.4 95 95 A Y E -c 58 0A 133 -38,-2.9 -36,-3.4 -2,-0.6 2,-0.4 -0.900 3.0-168.3-111.3 134.6 17.3 12.9 18.3 96 96 A I E -c 59 0A 17 -2,-0.4 2,-0.4 -38,-0.2 -36,-0.2 -0.971 5.0-166.1-124.9 123.1 20.1 11.2 16.3 97 97 A N E -c 60 0A 57 -38,-2.3 -36,-2.6 -2,-0.4 2,-0.5 -0.837 13.1-146.1-103.7 143.7 22.3 12.7 13.6 98 98 A Y E -c 61 0A 41 -2,-0.4 2,-0.4 -38,-0.2 -36,-0.2 -0.926 15.1-170.4-110.8 129.0 24.4 10.4 11.3 99 99 A Y E -c 62 0A 108 -38,-2.8 -36,-2.4 -2,-0.5 2,-1.6 -0.972 29.0-129.9-124.7 138.6 27.7 11.6 10.1 100 100 A D E -c 63 0A 52 -2,-0.4 3,-0.5 -38,-0.2 -36,-0.2 -0.702 25.0-155.6 -84.7 86.1 30.0 10.0 7.5 101 101 A A S S+ 0 0 54 -38,-2.0 -37,-0.2 -2,-1.6 2,-0.2 0.561 88.4 38.4 -38.9 -19.3 33.1 10.1 9.7 102 102 A N 0 0 122 -39,-0.7 -1,-0.3 -37,-0.1 -36,-0.0 -0.627 360.0 360.0-140.0 77.4 35.1 10.1 6.6 103 103 A A 0 0 115 -3,-0.5 -3,-0.1 -2,-0.2 -1,-0.0 -0.683 360.0 360.0-155.4 360.0 33.4 12.2 4.0