==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PEPTIDE BINDING PROTEIN 29-JAN-09 3G19 . COMPND 2 MOLECULE: ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS; . SOURCE 2 ORGANISM_SCIENTIFIC: CAULOBACTER VIBRIOIDES; . AUTHOR T.A.BAKER,G.ROMAN-HERNANDEZ,R.T.SAUER,R.A.GRANT . 87 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5582.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 61 70.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 17.2 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 3.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 36 41.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 36 A Q 0 0 228 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 169.8 -12.3 14.3 -8.9 2 37 A K - 0 0 162 0, 0.0 2,-0.1 0, 0.0 0, 0.0 -0.443 360.0-149.6-160.0 79.3 -8.6 14.3 -8.3 3 38 A P + 0 0 107 0, 0.0 81,-0.0 0, 0.0 0, 0.0 -0.318 19.7 178.5 -48.8 115.9 -6.7 10.9 -8.6 4 39 A S + 0 0 72 -2,-0.1 52,-0.4 80,-0.1 2,-0.2 -0.227 29.0 124.3-125.3 43.4 -3.9 11.2 -6.2 5 40 A L - 0 0 80 50,-0.1 79,-2.5 51,-0.1 2,-0.4 -0.626 48.2-136.9 -97.5 163.4 -2.0 7.9 -6.4 6 41 A Y E -AB 54 83A 42 48,-3.6 48,-2.7 77,-0.3 2,-0.3 -0.972 2.5-139.2-130.4 133.7 1.7 7.6 -7.2 7 42 A R E -AB 53 82A 87 75,-2.1 75,-1.9 -2,-0.4 2,-0.5 -0.683 17.0-138.6 -89.4 140.9 3.6 5.2 -9.4 8 43 A V E -AB 52 81A 0 44,-2.5 43,-3.2 -2,-0.3 44,-0.7 -0.868 18.9-161.4-102.2 129.5 6.9 3.8 -8.3 9 44 A L E -AB 50 80A 18 71,-3.8 71,-2.4 -2,-0.5 2,-0.5 -0.859 11.4-159.5-111.9 143.8 9.8 3.5 -10.8 10 45 A I E -AB 49 79A 1 39,-2.0 39,-1.6 -2,-0.4 2,-0.3 -0.991 18.6-146.9-117.1 127.3 12.9 1.5 -10.8 11 46 A L E -AB 48 78A 69 67,-2.3 67,-0.6 -2,-0.5 37,-0.2 -0.641 16.5-112.8 -94.5 151.1 15.7 2.7 -13.0 12 47 A N + 0 0 48 35,-2.5 2,-0.3 -2,-0.3 32,-0.1 -0.436 35.1 169.8 -78.0 152.0 18.2 0.6 -14.9 13 48 A D - 0 0 26 3,-0.2 34,-0.1 -2,-0.1 64,-0.1 -0.947 40.7-118.6-150.9 169.0 21.9 0.5 -14.2 14 49 A D S S+ 0 0 114 -2,-0.3 -2,-0.0 1,-0.1 30,-0.0 0.329 103.4 49.6 -93.4 9.2 24.8 -1.8 -15.3 15 50 A Y S S+ 0 0 164 72,-0.1 -1,-0.1 2,-0.1 -3,-0.0 0.756 78.7 91.4-119.8 -38.4 25.7 -3.1 -11.9 16 51 A T S S- 0 0 0 1,-0.1 71,-3.1 2,-0.0 -3,-0.2 -0.471 79.1-115.9 -67.1 129.7 22.6 -4.4 -10.0 17 52 A P B >> -c 87 0B 29 0, 0.0 4,-1.6 0, 0.0 3,-0.8 -0.399 11.7-128.1 -67.0 140.3 22.0 -8.1 -10.5 18 53 A M H 3> S+ 0 0 18 69,-2.5 4,-2.2 1,-0.2 5,-0.2 0.906 110.0 60.5 -49.5 -46.0 18.8 -9.1 -12.3 19 54 A E H 3> S+ 0 0 129 1,-0.2 4,-1.8 68,-0.2 -1,-0.2 0.846 101.9 51.7 -52.3 -40.3 18.1 -11.5 -9.4 20 55 A F H <> S+ 0 0 12 -3,-0.8 4,-2.3 2,-0.2 -1,-0.2 0.924 107.9 50.8 -66.3 -43.3 18.1 -8.6 -6.9 21 56 A V H X S+ 0 0 0 -4,-1.6 4,-1.9 1,-0.2 -2,-0.2 0.884 108.7 51.5 -62.3 -39.3 15.5 -6.6 -8.9 22 57 A V H X S+ 0 0 20 -4,-2.2 4,-2.6 1,-0.2 -1,-0.2 0.898 108.8 53.6 -62.2 -39.1 13.3 -9.6 -9.1 23 58 A Y H X S+ 0 0 73 -4,-1.8 4,-2.2 -5,-0.2 5,-0.3 0.921 108.5 46.9 -59.7 -48.2 13.6 -9.9 -5.3 24 59 A V H X>S+ 0 0 0 -4,-2.3 4,-1.1 1,-0.2 5,-0.6 0.848 114.0 48.9 -66.1 -33.6 12.6 -6.3 -4.7 25 60 A L H X5S+ 0 0 0 -4,-1.9 6,-2.3 -5,-0.2 4,-0.7 0.923 112.7 46.3 -71.2 -45.0 9.6 -6.7 -7.0 26 61 A E H <5S+ 0 0 79 -4,-2.6 -2,-0.2 4,-0.2 -1,-0.2 0.863 127.3 26.9 -65.7 -37.3 8.4 -9.9 -5.4 27 62 A R H ><5S+ 0 0 144 -4,-2.2 3,-1.0 -5,-0.2 -3,-0.2 0.946 127.6 34.4 -90.7 -65.0 8.7 -8.6 -1.9 28 63 A F H 3<5S+ 0 0 7 -4,-1.1 -3,-0.2 -5,-0.3 -2,-0.1 0.626 131.8 33.6 -72.6 -12.2 8.4 -4.8 -1.8 29 64 A F T 3< - 0 0 55 -2,-0.2 4,-2.7 1,-0.1 5,-0.3 -0.325 36.3-101.4 -71.0 166.8 4.3 -12.8 -8.7 33 68 A R H > S+ 0 0 192 1,-0.2 4,-2.4 2,-0.2 5,-0.2 0.936 122.8 48.9 -57.9 -46.7 7.3 -14.4 -10.3 34 69 A E H > S+ 0 0 150 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.923 115.1 43.1 -61.6 -44.5 5.9 -13.8 -13.8 35 70 A D H > S+ 0 0 54 2,-0.2 4,-2.4 1,-0.2 -1,-0.2 0.885 113.4 51.1 -70.4 -39.3 5.1 -10.2 -13.2 36 71 A A H X S+ 0 0 0 -4,-2.7 4,-2.4 2,-0.2 -1,-0.2 0.911 111.5 48.8 -63.2 -43.4 8.4 -9.4 -11.4 37 72 A T H X S+ 0 0 52 -4,-2.4 4,-2.7 -5,-0.3 5,-0.3 0.952 110.2 50.8 -59.1 -52.5 10.3 -11.0 -14.2 38 73 A R H X S+ 0 0 138 -4,-2.3 4,-1.8 1,-0.2 -2,-0.2 0.937 113.7 44.1 -50.4 -53.5 8.4 -9.0 -16.8 39 74 A I H X S+ 0 0 7 -4,-2.4 4,-2.0 1,-0.2 -1,-0.2 0.887 111.9 53.5 -62.7 -40.8 9.0 -5.7 -15.0 40 75 A M H X S+ 0 0 11 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.926 110.0 46.8 -59.9 -46.9 12.7 -6.5 -14.4 41 76 A L H X S+ 0 0 67 -4,-2.7 4,-2.3 1,-0.2 5,-0.3 0.823 108.9 55.9 -66.0 -31.6 13.3 -7.2 -18.1 42 77 A H H X S+ 0 0 89 -4,-1.8 4,-2.7 -5,-0.3 6,-0.6 0.880 108.9 47.4 -66.8 -38.4 11.5 -4.0 -18.9 43 78 A V H X S+ 0 0 0 -4,-2.0 4,-1.7 3,-0.2 -2,-0.2 0.939 113.8 47.3 -63.8 -48.4 13.9 -2.2 -16.7 44 79 A H H < S+ 0 0 69 -4,-2.4 -2,-0.2 1,-0.2 -1,-0.2 0.850 124.5 30.8 -63.0 -36.7 16.9 -3.9 -18.2 45 80 A Q H < S+ 0 0 148 -4,-2.3 -2,-0.2 -5,-0.2 -3,-0.2 0.844 130.0 32.0 -94.0 -39.1 15.8 -3.3 -21.8 46 81 A N H < S- 0 0 104 -4,-2.7 -3,-0.2 -5,-0.3 -2,-0.2 0.586 100.8-120.3 -99.2 -13.5 13.9 -0.0 -21.7 47 82 A G S < S+ 0 0 32 -4,-1.7 -35,-2.5 -5,-0.5 2,-0.3 0.242 86.9 47.5 95.0 -13.2 15.9 1.6 -18.9 48 83 A V E -A 11 0A 56 -6,-0.6 2,-0.3 -37,-0.2 -37,-0.2 -0.985 60.5-166.8-157.3 149.5 12.9 2.1 -16.5 49 84 A G E -A 10 0A 1 -39,-1.6 -39,-2.0 -2,-0.3 2,-0.6 -1.000 23.8-123.1-144.7 141.5 10.0 0.0 -15.2 50 85 A V E -A 9 0A 76 -2,-0.3 -41,-0.2 -41,-0.2 3,-0.1 -0.732 20.4-174.4 -86.2 118.6 6.8 0.7 -13.3 51 86 A C E - 0 0 1 -43,-3.2 2,-0.3 -2,-0.6 -1,-0.2 0.753 56.6 -67.3 -83.9 -27.0 6.6 -1.3 -10.0 52 87 A G E -A 8 0A 15 -44,-0.7 -44,-2.5 2,-0.0 2,-0.4 -0.911 43.5 -91.2 158.5 176.3 3.1 -0.3 -9.1 53 88 A V E +A 7 0A 56 -2,-0.3 2,-0.2 -46,-0.2 -46,-0.2 -0.984 47.8 152.8-124.6 125.8 0.7 2.4 -8.1 54 89 A Y E -A 6 0A 40 -48,-2.7 -48,-3.6 -2,-0.4 30,-0.2 -0.817 47.4 -72.7-139.7 175.6 0.0 3.3 -4.4 55 90 A T > - 0 0 64 -2,-0.2 4,-2.8 -50,-0.2 5,-0.2 -0.252 54.7-102.7 -64.1 163.3 -1.0 6.0 -2.1 56 91 A Y H > S+ 0 0 118 -52,-0.4 4,-2.8 1,-0.2 5,-0.2 0.931 121.6 49.4 -56.0 -48.8 1.6 8.7 -1.4 57 92 A E H > S+ 0 0 153 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.932 114.1 44.1 -56.7 -50.5 2.5 7.2 2.0 58 93 A V H > S+ 0 0 56 2,-0.2 4,-3.0 1,-0.2 5,-0.2 0.900 113.9 50.2 -64.1 -42.6 2.9 3.7 0.7 59 94 A A H X S+ 0 0 0 -4,-2.8 4,-2.7 2,-0.2 5,-0.2 0.938 110.4 49.6 -61.0 -48.3 4.9 4.8 -2.3 60 95 A E H X S+ 0 0 114 -4,-2.8 4,-1.6 -5,-0.2 -1,-0.2 0.885 113.5 48.2 -57.3 -40.2 7.2 6.9 -0.2 61 96 A T H X S+ 0 0 76 -4,-2.1 4,-2.5 -5,-0.2 -2,-0.2 0.950 112.6 45.8 -65.5 -51.3 7.7 3.8 2.1 62 97 A K H X S+ 0 0 27 -4,-3.0 4,-2.7 1,-0.2 -2,-0.2 0.878 109.8 54.2 -64.4 -39.8 8.3 1.3 -0.7 63 98 A V H X S+ 0 0 18 -4,-2.7 4,-2.2 -5,-0.2 5,-0.2 0.934 111.2 46.4 -57.8 -46.4 10.8 3.6 -2.5 64 99 A A H X S+ 0 0 58 -4,-1.6 4,-2.6 -5,-0.2 5,-0.3 0.909 111.0 52.5 -62.1 -43.7 12.8 3.9 0.7 65 100 A Q H X S+ 0 0 71 -4,-2.5 4,-2.4 1,-0.2 -2,-0.2 0.918 110.0 49.1 -57.0 -45.8 12.6 0.2 1.3 66 101 A V H X S+ 0 0 0 -4,-2.7 4,-2.7 2,-0.2 -2,-0.2 0.933 115.3 40.8 -62.4 -49.7 14.0 -0.5 -2.2 67 102 A I H X S+ 0 0 43 -4,-2.2 4,-2.8 2,-0.2 5,-0.2 0.903 114.8 51.2 -69.7 -42.1 16.9 1.9 -2.0 68 103 A D H X S+ 0 0 87 -4,-2.6 4,-2.4 -5,-0.2 -1,-0.2 0.934 113.3 46.9 -57.8 -46.5 17.8 1.0 1.6 69 104 A S H X S+ 0 0 0 -4,-2.4 4,-1.7 -5,-0.3 -2,-0.2 0.936 110.6 52.6 -59.1 -48.5 17.7 -2.7 0.5 70 105 A A H <>S+ 0 0 0 -4,-2.7 5,-3.0 1,-0.2 3,-0.3 0.924 111.7 45.0 -54.6 -49.2 19.8 -1.9 -2.6 71 106 A R H ><5S+ 0 0 93 -4,-2.8 3,-1.5 1,-0.2 -1,-0.2 0.888 110.4 53.5 -65.1 -40.3 22.5 -0.1 -0.5 72 107 A R H 3<5S+ 0 0 143 -4,-2.4 -1,-0.2 1,-0.3 -2,-0.2 0.769 111.5 46.9 -65.4 -24.7 22.6 -2.9 2.1 73 108 A H T 3<5S- 0 0 78 -4,-1.7 -1,-0.3 -3,-0.3 -2,-0.2 0.341 119.3-117.9 -94.7 4.1 23.1 -5.3 -0.8 74 109 A Q T < 5 + 0 0 167 -3,-1.5 -3,-0.2 1,-0.2 -2,-0.1 0.851 68.1 136.2 62.0 39.4 25.8 -2.9 -2.1 75 110 A H < - 0 0 39 -5,-3.0 -1,-0.2 -8,-0.1 -2,-0.1 -0.880 58.1-135.2-113.4 150.8 24.1 -2.2 -5.4 76 111 A P + 0 0 60 0, 0.0 -5,-0.1 0, 0.0 -62,-0.0 0.202 49.9 152.7 -86.8 14.6 23.7 1.2 -7.0 77 112 A L - 0 0 1 -7,-0.1 2,-0.4 -11,-0.1 -6,-0.1 -0.132 31.6-150.4 -52.6 135.3 20.0 0.7 -7.9 78 113 A Q E +B 11 0A 101 -67,-0.6 -67,-2.3 -8,-0.1 2,-0.3 -0.888 16.9 176.5-110.3 142.6 17.8 3.8 -8.1 79 114 A C E +B 10 0A 6 -2,-0.4 2,-0.3 -69,-0.2 -69,-0.2 -0.990 5.2 163.6-142.8 145.5 14.1 4.0 -7.3 80 115 A T E -B 9 0A 65 -71,-2.4 -71,-3.8 -2,-0.3 2,-0.3 -0.970 22.6-134.9-157.0 166.5 11.7 6.9 -7.2 81 116 A M E +B 8 0A 33 -2,-0.3 2,-0.3 -73,-0.2 -73,-0.2 -0.956 20.0 169.5-132.1 152.1 8.0 7.8 -7.2 82 117 A E E -B 7 0A 80 -75,-1.9 -75,-2.1 -2,-0.3 -2,-0.0 -0.963 46.3 -66.7-153.4 163.7 5.9 10.4 -9.1 83 118 A K E B 6 0A 146 -2,-0.3 -77,-0.3 -77,-0.2 -79,-0.1 -0.286 360.0 360.0 -58.0 131.1 2.2 11.2 -9.6 84 119 A D 0 0 123 -79,-2.5 -78,-0.2 -30,-0.2 -1,-0.2 0.813 360.0 360.0 -70.5 360.0 0.3 8.6 -11.6 85 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 86 1 C L 0 0 11 0, 0.0 2,-0.2 0, 0.0 -72,-0.1 0.000 360.0 360.0 360.0 159.6 21.1 -4.9 -15.1 87 2 C L B c 17 0B 96 -71,-3.1 -69,-2.5 1,-0.2 -68,-0.2 -0.478 360.0 360.0 -77.4 146.8 23.8 -7.5 -14.3 88 3 C L 0 0 143 -71,-0.2 -1,-0.2 -2,-0.2 -72,-0.0 -0.158 360.0 360.0 83.3 360.0 23.5 -11.0 -15.6