==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=21-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER NUCLEAR PROTEIN 10-FEB-09 3G7L . COMPND 2 MOLECULE: CHROMO DOMAIN-CONTAINING PROTEIN 1; . SOURCE 2 ORGANISM_SCIENTIFIC: SCHIZOSACCHAROMYCES POMBE; . AUTHOR T.SCHALCH,L.JOSHUA-TOR . 62 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4419.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 67.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 33.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 8.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 12.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 7 11.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 19 A A 0 0 136 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -83.2 -12.1 -13.9 -18.5 2 20 A D + 0 0 77 2,-0.0 60,-2.2 59,-0.0 2,-0.5 -0.050 360.0 117.0 -84.0 32.4 -10.9 -15.8 -15.4 3 21 A V E +A 61 0A 56 58,-0.2 2,-0.3 56,-0.0 58,-0.2 -0.889 40.6 173.6-111.0 128.0 -7.6 -14.1 -16.0 4 22 A Y E -A 60 0A 68 56,-2.6 56,-2.3 -2,-0.5 2,-0.3 -0.847 36.6 -88.3-131.8 165.9 -6.1 -11.7 -13.4 5 23 A E E -A 59 0A 86 -2,-0.3 22,-1.2 54,-0.2 2,-0.5 -0.559 36.7-136.8 -74.1 131.9 -3.0 -9.7 -12.7 6 24 A V E -C 26 0B 7 52,-2.8 52,-0.4 -2,-0.3 20,-0.2 -0.813 18.3-175.6 -85.3 121.4 -0.3 -11.5 -10.7 7 25 A E E - 0 0 114 18,-2.8 2,-0.3 -2,-0.5 19,-0.2 0.875 64.7 -35.9 -79.0 -43.1 1.3 -9.4 -7.9 8 26 A D E -C 25 0B 56 17,-1.6 17,-2.5 50,-0.0 2,-0.5 -0.992 48.7-109.0-169.9 161.0 3.9 -12.1 -7.0 9 27 A I E +C 24 0B 2 -2,-0.3 15,-0.2 15,-0.2 3,-0.1 -0.934 28.7 177.0-102.3 132.7 4.8 -15.7 -6.5 10 28 A L E - 0 0 58 13,-2.8 2,-0.3 -2,-0.5 14,-0.1 0.678 59.4 -13.1-108.6 -29.0 5.3 -16.7 -2.8 11 29 A A E -C 23 0B 34 12,-0.5 12,-2.6 2,-0.0 -1,-0.3 -0.973 55.6-141.9-162.2 169.8 6.0 -20.5 -2.9 12 30 A D E +C 22 0B 80 -2,-0.3 2,-0.3 10,-0.2 10,-0.2 -0.987 15.6 170.7-142.6 158.6 6.0 -23.6 -5.1 13 31 A R E -C 21 0B 110 8,-2.1 8,-2.9 -2,-0.3 2,-0.5 -0.966 32.8-114.6-153.1 164.2 5.3 -27.3 -4.9 14 32 A V E -C 20 0B 91 -2,-0.3 6,-0.2 6,-0.2 -2,-0.0 -0.931 33.3-150.8-102.4 128.5 4.9 -30.4 -7.0 15 33 A N > - 0 0 38 4,-2.3 3,-1.1 -2,-0.5 -1,-0.0 -0.015 38.8 -79.9 -82.1-163.6 1.3 -31.9 -7.0 16 34 A K T 3 S+ 0 0 197 1,-0.3 -1,-0.1 2,-0.1 -2,-0.0 0.751 129.1 54.9 -72.0 -26.3 0.3 -35.6 -7.5 17 35 A N T 3 S- 0 0 121 2,-0.1 -1,-0.3 1,-0.0 3,-0.1 0.335 118.5-109.2 -89.0 4.5 0.7 -35.3 -11.3 18 36 A G S < S+ 0 0 55 -3,-1.1 2,-0.4 1,-0.3 -2,-0.1 0.673 74.4 139.4 78.1 18.3 4.2 -34.1 -11.0 19 37 A I - 0 0 73 1,-0.0 -4,-2.3 20,-0.0 -1,-0.3 -0.801 56.0-117.1 -99.6 132.1 3.2 -30.6 -12.1 20 38 A N E -C 14 0B 60 -2,-0.4 19,-2.1 -6,-0.2 2,-0.3 -0.491 29.8-167.1 -64.3 132.5 4.7 -27.5 -10.5 21 39 A E E -CD 13 38B 34 -8,-2.9 -8,-2.1 17,-0.3 2,-0.4 -0.950 4.9-152.1-122.0 146.8 2.1 -25.3 -8.8 22 40 A Y E -CD 12 37B 4 15,-2.8 15,-2.7 -2,-0.3 2,-0.8 -0.937 16.4-125.9-126.7 137.3 2.9 -21.7 -7.6 23 41 A Y E -CD 11 36B 64 -12,-2.6 -13,-2.8 -2,-0.4 -12,-0.5 -0.760 35.3-153.3 -89.2 112.6 1.3 -19.8 -4.8 24 42 A I E -CD 9 35B 0 11,-3.2 11,-1.0 -2,-0.8 2,-0.7 -0.735 20.5-157.2 -99.7 128.6 -0.0 -16.6 -6.2 25 43 A K E -C 8 0B 14 -17,-2.5 -18,-2.8 -2,-0.5 -17,-1.6 -0.899 27.5-143.7 -89.3 115.8 -0.6 -13.2 -4.6 26 44 A W E > -C 6 0B 0 -2,-0.7 3,-2.2 -20,-0.2 -20,-0.2 -0.710 20.3-110.5 -88.6 122.1 -3.2 -11.6 -6.9 27 45 A A T 3 S+ 0 0 27 -22,-1.2 -22,-0.2 -2,-0.5 3,-0.1 -0.240 103.6 13.1 -48.4 127.5 -2.8 -7.8 -7.4 28 46 A G T 3 S+ 0 0 78 1,-0.3 2,-0.3 -3,-0.0 -1,-0.3 0.597 108.3 98.7 82.5 10.1 -5.7 -6.1 -5.6 29 47 A Y S < S- 0 0 88 -3,-2.2 -1,-0.3 2,-0.0 2,-0.1 -0.948 73.5-113.0-128.3 148.7 -6.8 -9.1 -3.7 30 48 A D > - 0 0 88 -2,-0.3 3,-2.7 1,-0.1 -4,-0.2 -0.325 36.1 -96.5 -82.5 167.3 -6.0 -9.9 -0.0 31 49 A W G > S+ 0 0 145 1,-0.3 3,-0.6 2,-0.2 -1,-0.1 0.570 120.2 67.5 -60.6 -13.6 -3.9 -12.9 1.2 32 50 A Y G 3 S+ 0 0 207 1,-0.2 -1,-0.3 3,-0.0 -2,-0.0 0.550 96.3 57.7 -79.7 -10.1 -7.0 -15.0 1.8 33 51 A D G < S+ 0 0 53 -3,-2.7 -1,-0.2 -7,-0.1 -2,-0.2 0.387 77.5 125.1 -95.7 -3.0 -7.5 -15.0 -2.0 34 52 A N < - 0 0 13 -3,-0.6 2,-0.3 -4,-0.2 -9,-0.2 -0.284 40.9-171.1 -58.8 144.7 -4.1 -16.5 -2.7 35 53 A T E -D 24 0B 38 -11,-1.0 -11,-3.2 -13,-0.1 2,-0.5 -0.967 27.6-119.0-139.4 151.2 -4.3 -19.7 -4.8 36 54 A W E -D 23 0B 77 -2,-0.3 -13,-0.2 -13,-0.2 27,-0.2 -0.840 37.2-172.1 -84.5 125.7 -2.0 -22.5 -6.0 37 55 A E E -D 22 0B 0 -15,-2.7 -15,-2.8 -2,-0.5 25,-0.1 -0.969 24.1-116.3-122.6 140.1 -1.9 -22.5 -9.8 38 56 A P E > -D 21 0B 22 0, 0.0 3,-1.5 0, 0.0 4,-0.3 -0.320 38.8-102.9 -64.9 154.4 -0.3 -25.0 -12.1 39 57 A E G > S+ 0 0 59 -19,-2.1 3,-1.7 1,-0.3 -18,-0.1 0.814 118.0 61.7 -49.7 -40.1 2.6 -23.7 -14.2 40 58 A Q G > S+ 0 0 150 1,-0.3 3,-1.3 2,-0.1 -1,-0.3 0.841 92.3 64.8 -58.4 -32.9 0.5 -23.5 -17.4 41 59 A N G < S+ 0 0 15 -3,-1.5 20,-2.1 1,-0.3 3,-0.4 0.627 89.2 71.1 -67.4 -8.6 -1.9 -20.9 -15.8 42 60 A L G X + 0 0 5 -3,-1.7 3,-2.2 -4,-0.3 -1,-0.3 0.123 57.6 122.4 -96.1 23.1 1.1 -18.6 -15.7 43 61 A F T < S+ 0 0 128 -3,-1.3 3,-0.4 1,-0.3 -1,-0.2 0.782 79.1 44.6 -52.3 -31.1 1.1 -18.0 -19.5 44 62 A G B 3 S+B 59 0A 21 15,-0.6 15,-1.8 -3,-0.4 -1,-0.3 0.465 105.4 63.8 -93.0 1.4 0.7 -14.3 -18.9 45 63 A A <> + 0 0 0 -3,-2.2 4,-2.1 13,-0.3 5,-0.2 -0.245 55.1 139.5-125.4 40.4 3.3 -14.0 -16.1 46 64 A E H > S+ 0 0 142 -3,-0.4 4,-2.0 1,-0.2 5,-0.2 0.893 71.6 49.4 -56.2 -48.3 6.6 -15.0 -17.9 47 65 A K H > S+ 0 0 154 1,-0.2 4,-1.9 2,-0.2 -1,-0.2 0.913 113.4 42.5 -64.1 -46.2 8.8 -12.3 -16.2 48 66 A V H > S+ 0 0 14 1,-0.2 4,-2.8 2,-0.2 -1,-0.2 0.873 114.1 53.6 -72.0 -32.5 7.8 -13.0 -12.5 49 67 A L H X S+ 0 0 17 -4,-2.1 4,-2.2 2,-0.2 -1,-0.2 0.885 110.8 45.0 -64.6 -41.8 7.9 -16.7 -13.1 50 68 A K H X S+ 0 0 106 -4,-2.0 4,-1.9 2,-0.2 -2,-0.2 0.825 112.1 51.9 -77.3 -31.9 11.4 -16.6 -14.4 51 69 A K H X S+ 0 0 121 -4,-1.9 4,-2.2 -5,-0.2 -2,-0.2 0.965 111.1 48.5 -64.0 -48.4 12.5 -14.3 -11.7 52 70 A W H < S+ 0 0 48 -4,-2.8 -2,-0.2 1,-0.2 -1,-0.2 0.908 112.6 48.3 -56.5 -43.7 11.0 -16.8 -9.1 53 71 A K H < S+ 0 0 115 -4,-2.2 -1,-0.2 1,-0.2 -2,-0.2 0.854 113.3 46.5 -68.5 -34.4 12.8 -19.7 -10.8 54 72 A K H < 0 0 163 -4,-1.9 -1,-0.2 1,-0.2 -2,-0.2 0.834 360.0 360.0 -78.4 -32.5 16.2 -18.0 -10.9 55 73 A R < 0 0 183 -4,-2.2 -1,-0.2 -5,-0.2 -2,-0.2 0.909 360.0 360.0 -62.7 360.0 16.2 -16.7 -7.4 56 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 57 4 P K 0 0 166 0, 0.0 2,-0.4 0, 0.0 -50,-0.1 0.000 360.0 360.0 360.0 111.3 2.1 -6.4 -16.2 58 5 P Q - 0 0 40 -52,-0.4 -52,-2.8 -13,-0.1 2,-0.3 -0.820 360.0-175.8-105.9 130.6 1.9 -10.0 -15.4 59 6 P T E +AB 5 44A 32 -15,-1.8 -15,-0.6 -2,-0.4 2,-0.3 -0.899 7.4 168.0-127.2 153.5 -1.3 -12.1 -15.9 60 7 P A E -A 4 0A 0 -56,-2.3 -56,-2.6 -2,-0.3 2,-0.4 -0.978 39.5-100.4-155.7 157.2 -2.3 -15.7 -15.1 61 8 P R E -A 3 0A 109 -20,-2.1 2,-0.7 -2,-0.3 -58,-0.2 -0.736 33.2-148.9 -83.7 130.4 -5.5 -17.8 -15.0 62 9 P X 0 0 47 -60,-2.2 -25,-0.1 -2,-0.4 -26,-0.0 -0.909 360.0 360.0-103.2 112.1 -6.9 -18.2 -11.4 63 10 P S 0 0 113 -2,-0.7 -1,-0.1 -27,-0.2 -2,-0.0 0.302 360.0 360.0 -43.5 360.0 -8.8 -21.5 -10.9