==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-NOV-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ELECTRON TRANSPORT 16-JUL-96 1GKS . COMPND 2 MOLECULE: CYTOCHROME C551; . SOURCE 2 ORGANISM_SCIENTIFIC: HALORHODOSPIRA HALOPHILA; . AUTHOR B.BERSCH,M.J.BLACKLEDGE,T.E.MEYER,D.MARION . 78 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4599.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 54 69.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 2 2.6 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 14 17.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 28 35.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 1 1 1 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A D > 0 0 117 0, 0.0 4,-2.5 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0-169.6 5.8 12.6 3.1 2 2 A G H > + 0 0 13 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.864 360.0 53.6 -52.1 -41.2 4.5 9.3 1.5 3 3 A E H > S+ 0 0 86 2,-0.2 4,-3.1 1,-0.2 5,-0.3 0.958 107.7 49.0 -59.9 -52.6 7.3 7.5 3.3 4 4 A S H >>S+ 0 0 47 2,-0.2 4,-3.0 1,-0.2 5,-2.6 0.939 114.0 46.9 -51.1 -52.3 6.2 9.0 6.7 5 5 A I H <5S+ 0 0 27 -4,-2.5 9,-0.3 3,-0.2 -2,-0.2 0.967 115.3 45.2 -53.0 -59.7 2.6 7.9 6.0 6 6 A Y H <5S+ 0 0 4 -4,-3.0 9,-1.7 1,-0.2 8,-0.4 0.873 119.8 40.1 -52.2 -49.1 3.7 4.4 4.8 7 7 A I H <5S- 0 0 77 -4,-3.1 9,-0.2 -5,-0.2 -1,-0.2 0.939 143.9 -20.2 -72.1 -50.6 6.1 3.8 7.7 8 8 A N T <5S+ 0 0 111 -4,-3.0 -3,-0.2 -5,-0.3 2,-0.2 0.539 114.5 82.0-139.0 -17.1 4.2 5.3 10.7 9 9 A G S > S+ 0 0 16 -8,-0.4 4,-2.6 -9,-0.3 3,-2.1 0.926 95.8 62.4 -58.0 -48.1 1.4 -0.4 6.2 15 15 A S H 3>>S+ 0 0 21 -9,-1.7 4,-2.7 1,-0.3 5,-0.6 0.866 90.4 66.0 -39.6 -56.9 5.0 -1.2 7.1 16 16 A S H 345S+ 0 0 57 -9,-0.2 -1,-0.3 -3,-0.2 -2,-0.2 0.694 120.3 20.5 -43.5 -31.6 4.0 -3.8 9.7 17 17 A C H <>>S+ 0 0 54 -3,-2.1 4,-2.5 -4,-0.5 5,-2.5 0.813 127.5 44.3-104.3 -56.5 2.6 -5.9 6.9 18 18 A H H <5S+ 0 0 20 -4,-2.6 10,-0.6 1,-0.2 -3,-0.2 0.753 104.8 61.9 -68.6 -28.5 4.2 -4.8 3.6 19 19 A D T <5S+ 0 0 110 -4,-2.7 -1,-0.2 -5,-0.4 -3,-0.1 0.898 121.4 24.8 -63.4 -39.2 7.8 -4.6 4.9 20 20 A R T 4<5 - 0 0 15 -4,-2.5 3,-2.2 5,-0.1 -3,-0.2 0.827 36.5-158.7 89.0 40.6 5.1 -9.4 3.2 22 22 A V G > - 0 0 79 -2,-0.2 3,-0.7 1,-0.1 -8,-0.1 -0.245 16.2 -89.7 -83.5 168.0 6.4 -6.1 -0.9 28 28 A L T 3 S+ 0 0 23 -10,-0.6 -1,-0.1 1,-0.2 47,-0.1 -0.346 108.5 14.3 -68.7 158.8 8.6 -3.1 -1.5 29 29 A N T 3 S+ 0 0 118 45,-0.5 -1,-0.2 1,-0.1 49,-0.1 0.822 96.7 114.6 36.4 49.4 11.2 -3.2 -4.3 30 30 A A X> + 0 0 16 -3,-0.7 3,-2.2 1,-0.1 4,-0.5 -0.509 37.8 175.1-140.2 62.2 9.5 -6.3 -5.7 31 31 A P H >> S+ 0 0 55 0, 0.0 4,-2.7 0, 0.0 3,-2.0 0.803 76.8 65.0 -44.1 -41.4 8.0 -5.3 -9.1 32 32 A E H 3> S+ 0 0 136 1,-0.3 4,-0.7 2,-0.2 46,-0.0 0.850 96.3 57.2 -49.5 -41.1 6.9 -8.9 -9.8 33 33 A D H <4 S+ 0 0 56 -3,-2.2 -1,-0.3 1,-0.2 4,-0.1 0.706 117.6 32.9 -64.3 -24.9 4.4 -8.6 -6.9 34 34 A W H X< S+ 0 0 19 -3,-2.0 3,-1.3 -4,-0.5 -2,-0.2 0.711 94.6 86.6-105.0 -30.9 2.8 -5.6 -8.5 35 35 A A H 3< S+ 0 0 72 -4,-2.7 4,-0.2 1,-0.3 -2,-0.1 0.815 96.7 42.0 -38.6 -49.9 3.2 -6.4 -12.3 36 36 A D T 3< S+ 0 0 152 -4,-0.7 -1,-0.3 2,-0.1 -2,-0.1 0.729 101.9 84.0 -74.6 -27.7 -0.1 -8.5 -12.3 37 37 A R S < S- 0 0 74 -3,-1.3 2,-1.9 1,-0.1 3,-0.1 -0.480 102.4 -94.1 -76.7 151.0 -2.1 -6.0 -10.1 38 38 A P - 0 0 85 0, 0.0 6,-0.5 0, 0.0 5,-0.2 -0.472 46.2-164.9 -63.1 85.8 -3.8 -2.9 -11.7 39 39 A S + 0 0 54 -2,-1.9 2,-0.2 -4,-0.2 36,-0.1 0.663 49.6 117.6 -54.5 -25.5 -0.6 -0.8 -10.9 40 40 A S >> - 0 0 75 1,-0.2 4,-2.6 2,-0.1 3,-2.2 -0.305 65.0-142.8 -48.2 113.8 -2.6 2.4 -11.5 41 41 A V H 3> S+ 0 0 42 1,-0.3 4,-2.8 2,-0.2 5,-0.2 0.879 100.6 60.4 -47.8 -46.1 -2.5 4.2 -8.0 42 42 A D H 34 S+ 0 0 88 1,-0.2 4,-0.3 2,-0.2 -1,-0.3 0.699 113.1 37.3 -58.2 -24.6 -6.1 5.5 -8.7 43 43 A E H X> S+ 0 0 99 -3,-2.2 4,-1.5 -5,-0.2 3,-1.4 0.877 112.8 55.5 -90.1 -53.0 -7.2 1.8 -8.9 44 44 A L H 3X S+ 0 0 12 -4,-2.6 4,-2.6 -6,-0.5 -2,-0.2 0.835 101.6 59.7 -47.8 -42.0 -4.9 0.4 -6.1 45 45 A V H 3X S+ 0 0 0 -4,-2.8 4,-3.1 -5,-0.2 -1,-0.3 0.865 102.2 52.6 -60.4 -34.6 -6.3 3.0 -3.7 46 46 A E H <> S+ 0 0 92 -3,-1.4 4,-3.0 -4,-0.3 5,-0.3 0.966 109.6 48.3 -64.5 -50.1 -9.8 1.5 -4.2 47 47 A S H X S+ 0 0 44 -4,-1.5 4,-2.5 1,-0.2 -2,-0.2 0.906 113.8 48.9 -51.1 -46.1 -8.5 -2.0 -3.4 48 48 A T H < S+ 0 0 21 -4,-2.6 10,-1.1 2,-0.2 -2,-0.2 0.944 112.1 46.1 -62.3 -50.6 -6.8 -0.4 -0.3 49 49 A L H < S+ 0 0 24 -4,-3.1 10,-2.1 1,-0.2 9,-0.7 0.918 120.2 40.0 -60.0 -45.4 -9.9 1.4 0.9 50 50 A A H < S- 0 0 77 -4,-3.0 7,-0.2 7,-0.2 -1,-0.2 0.793 114.5-122.9 -71.9 -32.7 -12.1 -1.7 0.4 51 51 A G < - 0 0 22 -4,-2.5 2,-0.3 -5,-0.3 -1,-0.2 -0.141 18.6-137.0 99.6 160.2 -9.5 -4.1 1.7 52 52 A K B > -A 55 0A 117 3,-1.6 3,-2.6 -4,-0.1 2,-0.3 -0.896 56.6 -44.0-157.6 122.0 -8.0 -7.2 -0.0 53 53 A G T 3 S- 0 0 88 1,-0.3 -30,-0.1 -2,-0.3 -28,-0.0 -0.395 134.0 -5.2 58.1-117.1 -7.2 -10.6 1.3 54 54 A A T 3 S+ 0 0 73 -2,-0.3 -1,-0.3 -31,-0.2 -31,-0.1 0.718 113.0 103.0 -76.5 -25.0 -5.7 -10.0 4.8 55 55 A M B < S-A 52 0A 47 -3,-2.6 -3,-1.6 -32,-0.1 3,-0.1 -0.506 70.4-137.1 -65.9 115.9 -5.6 -6.2 4.2 56 56 A P - 0 0 76 0, 0.0 2,-0.2 0, 0.0 -5,-0.2 -0.176 33.2 -82.7 -65.1 164.8 -8.5 -4.6 6.2 57 57 A A - 0 0 43 -7,-0.2 -7,-0.2 -6,-0.1 -8,-0.2 -0.524 35.8-166.2 -68.3 134.7 -10.7 -1.9 4.7 58 58 A Y >> + 0 0 15 -10,-1.1 4,-2.4 -9,-0.7 3,-1.5 0.578 42.5 130.2 -97.0 -15.1 -9.1 1.6 5.1 59 59 A D B 34 S+b 62 0B 117 -10,-2.1 4,-0.1 1,-0.3 -2,-0.1 -0.229 88.9 3.4 -47.8 100.8 -12.3 3.6 4.2 60 60 A G T 34 S+ 0 0 69 2,-0.7 -1,-0.3 -2,-0.3 3,-0.1 -0.228 123.1 71.2 112.1 -38.0 -12.3 6.1 7.1 61 61 A R T <4 S+ 0 0 133 -3,-1.5 2,-0.4 1,-0.3 -2,-0.2 0.865 114.6 16.5 -76.4 -38.9 -9.1 5.0 8.8 62 62 A A B < S-b 59 0B 6 -4,-2.4 -2,-0.7 -52,-0.1 -1,-0.3 -0.999 84.3-127.4-132.7 136.6 -7.0 6.5 6.0 63 63 A D >> - 0 0 94 -2,-0.4 4,-2.5 -3,-0.1 3,-0.9 -0.611 28.4-109.9 -81.8 144.8 -8.2 9.0 3.4 64 64 A R H 3> S+ 0 0 79 1,-0.3 4,-3.2 -2,-0.3 5,-0.2 0.797 122.0 54.9 -32.3 -44.9 -7.7 8.3 -0.3 65 65 A E H 3> S+ 0 0 110 2,-0.2 4,-2.4 1,-0.2 -1,-0.3 0.933 110.2 43.7 -61.6 -49.5 -5.2 11.2 -0.3 66 66 A D H <> S+ 0 0 64 -3,-0.9 4,-2.2 2,-0.2 -2,-0.2 0.965 116.7 47.6 -56.1 -56.9 -3.1 9.6 2.5 67 67 A L H X S+ 0 0 5 -4,-2.5 4,-3.2 1,-0.2 3,-0.3 0.936 109.9 52.2 -48.6 -58.6 -3.4 6.2 0.8 68 68 A V H X S+ 0 0 25 -4,-3.2 4,-3.1 1,-0.3 5,-0.3 0.908 109.7 49.4 -46.1 -53.5 -2.4 7.6 -2.6 69 69 A K H X S+ 0 0 74 -4,-2.4 4,-1.6 1,-0.2 -1,-0.3 0.868 114.4 45.0 -59.0 -39.0 0.7 9.2 -1.0 70 70 A A H X S+ 0 0 3 -4,-2.2 4,-2.8 -3,-0.3 -2,-0.2 0.921 113.7 50.1 -69.8 -43.6 1.6 5.9 0.7 71 71 A I H X S+ 0 0 6 -4,-3.2 4,-3.0 2,-0.2 5,-0.2 0.934 110.0 48.1 -63.5 -49.9 0.9 3.9 -2.5 72 72 A E H X S+ 0 0 104 -4,-3.1 4,-2.5 1,-0.2 -1,-0.2 0.921 112.7 51.1 -60.1 -39.1 3.0 6.1 -4.8 73 73 A Y H < S+ 0 0 42 -4,-1.6 4,-0.4 -5,-0.3 -2,-0.2 0.941 111.1 47.8 -60.1 -47.5 5.8 5.8 -2.2 74 74 A M H >< S+ 0 0 11 -4,-2.8 3,-2.1 1,-0.2 -45,-0.5 0.983 114.5 45.9 -54.0 -59.3 5.4 2.0 -2.2 75 75 A L H >< S+ 0 0 35 -4,-3.0 3,-2.3 1,-0.3 -1,-0.2 0.822 98.8 70.4 -55.0 -35.9 5.5 1.9 -6.0 76 76 A S T 3< S+ 0 0 85 -4,-2.5 -1,-0.3 1,-0.3 -2,-0.2 0.621 93.3 58.6 -62.9 -10.7 8.5 4.3 -6.3 77 77 A T T < 0 0 42 -3,-2.1 -1,-0.3 -4,-0.4 -2,-0.2 0.559 360.0 360.0 -89.6 -11.6 10.7 1.5 -4.8 78 78 A L < 0 0 89 -3,-2.3 -2,-0.2 -4,-0.3 -1,-0.2 0.713 360.0 360.0 -78.5 360.0 9.8 -0.9 -7.7