==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-JUN-2013 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 01-APR-09 3GWO . COMPND 2 MOLECULE: ENVELOPE GLYCOPROTEIN GP160; . SOURCE 2 ORGANISM_SCIENTIFIC: HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 LW . AUTHOR J.LIU . 94 2 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8153.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 85 90.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 85 90.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 2 A W 0 0 132 0, 0.0 81,-0.0 0, 0.0 84,-0.0 0.000 360.0 360.0 360.0 151.1 -3.9 22.7 47.0 2 3 A D > - 0 0 87 1,-0.1 4,-2.7 4,-0.0 5,-0.2 -0.146 360.0-106.9 -63.5 160.3 -1.1 25.2 48.0 3 4 A R H > S+ 0 0 160 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.867 119.0 52.4 -55.9 -49.5 1.4 26.7 45.6 4 5 A E H > S+ 0 0 102 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.910 113.3 46.6 -51.4 -46.9 4.4 24.5 46.9 5 6 A I H > S+ 0 0 0 1,-0.2 4,-3.0 2,-0.2 5,-0.3 0.917 112.1 48.8 -68.5 -41.4 2.2 21.5 46.4 6 7 A N H X S+ 0 0 64 -4,-2.7 4,-2.0 1,-0.2 -1,-0.2 0.873 109.7 51.5 -66.4 -33.6 1.1 22.5 42.9 7 8 A N H X S+ 0 0 74 -4,-2.7 4,-1.7 -5,-0.2 -1,-0.2 0.906 113.7 46.7 -67.6 -37.6 4.6 23.3 41.8 8 9 A Y H X S+ 0 0 87 -4,-1.9 4,-2.6 2,-0.2 -2,-0.2 0.970 115.4 42.1 -66.1 -52.6 5.6 19.7 43.0 9 10 A T H X S+ 0 0 11 -4,-3.0 4,-2.5 1,-0.3 5,-0.3 0.846 112.7 56.2 -71.4 -27.3 2.7 17.8 41.4 10 11 A S H X S+ 0 0 74 -4,-2.0 4,-2.2 -5,-0.3 -1,-0.3 0.926 110.3 44.0 -70.4 -43.7 3.0 19.8 38.2 11 12 A L H X S+ 0 0 91 -4,-1.7 4,-2.8 -5,-0.2 5,-0.2 0.957 115.7 45.7 -60.8 -54.9 6.6 18.9 37.9 12 13 A I H X S+ 0 0 38 -4,-2.6 4,-2.9 2,-0.2 5,-0.2 0.940 114.0 48.7 -63.1 -41.5 6.2 15.2 38.7 13 14 A H H X S+ 0 0 73 -4,-2.5 4,-2.7 1,-0.2 5,-0.2 0.938 112.8 48.6 -58.3 -48.1 3.1 14.8 36.4 14 15 A S H X S+ 0 0 51 -4,-2.2 4,-1.9 -5,-0.3 -1,-0.2 0.912 113.6 47.2 -60.0 -42.0 4.9 16.6 33.6 15 16 A L H X S+ 0 0 85 -4,-2.8 4,-2.0 2,-0.2 -1,-0.2 0.894 113.9 45.9 -68.1 -40.4 8.0 14.3 34.1 16 17 A I H X S+ 0 0 9 -4,-2.9 4,-2.9 -5,-0.2 -2,-0.2 0.929 111.0 52.7 -71.8 -40.1 6.1 11.1 34.2 17 18 A E H X S+ 0 0 46 -4,-2.7 4,-3.2 -5,-0.2 -1,-0.2 0.881 108.8 51.2 -58.9 -41.2 3.9 12.0 31.2 18 19 A E H X S+ 0 0 124 -4,-1.9 4,-2.6 -5,-0.2 -1,-0.2 0.930 110.9 46.9 -63.4 -45.0 7.1 12.6 29.2 19 20 A S H X S+ 0 0 40 -4,-2.0 4,-2.2 2,-0.2 -2,-0.2 0.905 113.7 49.7 -64.3 -37.5 8.5 9.2 30.2 20 21 A Q H X S+ 0 0 34 -4,-2.9 4,-2.5 2,-0.2 -2,-0.2 0.905 109.2 50.7 -66.9 -45.8 5.1 7.7 29.3 21 22 A N H X S+ 0 0 107 -4,-3.2 4,-2.7 2,-0.2 -2,-0.2 0.929 111.1 49.7 -54.0 -45.8 5.0 9.4 25.9 22 23 A Q H X S+ 0 0 100 -4,-2.6 4,-2.7 1,-0.2 -2,-0.2 0.908 111.4 48.6 -62.8 -42.6 8.6 8.1 25.2 23 24 A Q H X S+ 0 0 25 -4,-2.2 4,-2.3 2,-0.2 -1,-0.2 0.898 111.1 49.7 -63.2 -40.7 7.6 4.6 26.2 24 25 A E H X S+ 0 0 56 -4,-2.5 4,-2.5 2,-0.2 -2,-0.2 0.912 111.8 49.0 -64.1 -43.4 4.5 4.7 24.0 25 26 A K H X S+ 0 0 105 -4,-2.7 4,-2.6 2,-0.2 -2,-0.2 0.924 110.4 51.0 -61.9 -42.5 6.7 5.9 21.1 26 27 A N H X S+ 0 0 68 -4,-2.7 4,-2.7 1,-0.2 -2,-0.2 0.908 110.0 50.3 -62.7 -39.5 9.2 3.1 21.7 27 28 A E H X S+ 0 0 33 -4,-2.3 4,-2.2 2,-0.2 -1,-0.2 0.935 110.7 48.0 -63.6 -47.4 6.3 0.6 21.7 28 29 A Q H X S+ 0 0 120 -4,-2.5 4,-2.0 1,-0.2 -2,-0.2 0.905 112.6 50.3 -64.4 -34.4 5.0 1.9 18.4 29 30 A E H X S+ 0 0 100 -4,-2.6 4,-2.7 1,-0.2 -2,-0.2 0.905 108.0 51.5 -68.8 -40.0 8.5 1.8 17.0 30 31 A L H X S+ 0 0 25 -4,-2.7 4,-1.9 2,-0.2 -1,-0.2 0.891 108.4 52.7 -61.7 -37.9 9.0 -1.8 18.1 31 32 A L H X S+ 0 0 68 -4,-2.2 4,-2.0 1,-0.2 -2,-0.2 0.900 108.1 51.0 -64.6 -41.1 5.8 -2.6 16.4 32 33 A E H X S+ 0 0 119 -4,-2.0 4,-2.1 1,-0.2 -2,-0.2 0.907 109.4 50.5 -56.7 -50.0 7.1 -1.0 13.2 33 34 A L H X S+ 0 0 81 -4,-2.7 4,-2.9 1,-0.2 -1,-0.2 0.843 106.3 55.0 -60.5 -33.1 10.2 -3.1 13.5 34 35 A D H X S+ 0 0 75 -4,-1.9 4,-2.4 2,-0.2 -1,-0.2 0.920 107.9 49.1 -64.2 -42.2 8.1 -6.2 13.9 35 36 A K H X S+ 0 0 149 -4,-2.0 4,-2.3 2,-0.2 -2,-0.2 0.863 110.9 51.0 -63.5 -38.6 6.4 -5.4 10.6 36 37 A W H X S+ 0 0 160 -4,-2.1 4,-2.7 2,-0.2 -2,-0.2 0.940 109.5 49.5 -66.1 -45.9 9.8 -4.8 9.0 37 38 A A H X S+ 0 0 44 -4,-2.9 4,-3.0 1,-0.2 -2,-0.2 0.903 110.2 51.7 -54.7 -42.6 11.0 -8.2 10.3 38 39 A S H X S+ 0 0 69 -4,-2.4 4,-2.1 2,-0.2 -2,-0.2 0.887 110.3 48.2 -61.2 -43.2 7.8 -9.8 8.9 39 40 A L H X S+ 0 0 72 -4,-2.3 4,-2.0 2,-0.2 -2,-0.2 0.943 113.6 47.3 -62.9 -46.7 8.4 -8.3 5.5 40 41 A W H X S+ 0 0 154 -4,-2.7 4,-2.6 1,-0.2 -2,-0.2 0.939 110.0 52.2 -62.7 -41.5 12.1 -9.5 5.5 41 42 A N H X S+ 0 0 90 -4,-3.0 4,-2.9 1,-0.2 5,-0.3 0.873 105.8 55.8 -62.1 -38.9 11.0 -13.0 6.6 42 43 A W H X S+ 0 0 154 -4,-2.1 4,-2.6 2,-0.2 -1,-0.2 0.942 109.9 45.2 -60.0 -45.7 8.6 -13.1 3.6 43 44 A F H X S+ 0 0 113 -4,-2.0 4,-2.6 1,-0.2 -2,-0.2 0.931 113.5 50.7 -63.7 -39.2 11.4 -12.3 1.2 44 45 A N H X S+ 0 0 75 -4,-2.6 4,-2.5 2,-0.2 -2,-0.2 0.907 111.2 46.1 -66.1 -40.6 13.7 -14.8 2.9 45 46 A I H X S+ 0 0 76 -4,-2.9 4,-2.9 2,-0.2 5,-0.3 0.919 112.8 51.0 -66.3 -44.8 11.1 -17.6 2.8 46 47 A T H X S+ 0 0 64 -4,-2.6 4,-2.1 -5,-0.3 -2,-0.2 0.921 111.9 47.4 -55.6 -48.9 10.3 -16.8 -0.9 47 48 A N H X S+ 0 0 107 -4,-2.6 4,-1.8 2,-0.2 -2,-0.2 0.909 112.5 49.4 -57.6 -46.1 14.0 -17.0 -1.7 48 49 A W H X S+ 0 0 160 -4,-2.5 4,-2.1 1,-0.2 -2,-0.2 0.929 110.8 48.9 -65.3 -42.8 14.5 -20.3 0.2 49 50 A L H X S+ 0 0 89 -4,-2.9 4,-1.1 1,-0.2 -1,-0.2 0.906 110.2 51.9 -65.0 -35.2 11.5 -22.0 -1.5 50 51 A W H < S+ 0 0 174 -4,-2.1 3,-0.3 -5,-0.3 -1,-0.2 0.908 110.8 48.2 -64.7 -37.9 12.8 -20.9 -4.9 51 52 A Y H < S+ 0 0 194 -4,-1.8 -2,-0.2 1,-0.2 -1,-0.2 0.848 117.3 41.4 -71.8 -33.9 16.2 -22.4 -4.1 52 53 A I H < 0 0 83 -4,-2.1 -1,-0.2 -5,-0.1 -2,-0.2 0.493 360.0 360.0 -94.8 -1.6 14.7 -25.7 -2.9 53 54 A K < 0 0 181 -4,-1.1 -3,-0.1 -3,-0.3 -4,-0.0 -0.051 360.0 360.0 -61.9 360.0 12.1 -26.2 -5.5 54 !* 0 0 0 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 360.0 0.0 0.0 0.0 55 12 B L > 0 0 161 0, 0.0 4,-2.2 0, 0.0 5,-0.2 0.000 360.0 360.0 360.0 -56.1 13.5 -10.1 20.8 56 13 B I H > + 0 0 33 1,-0.2 4,-2.2 2,-0.2 5,-0.2 0.917 360.0 51.1 -58.3 -43.8 11.1 -7.5 19.7 57 14 B H H > S+ 0 0 141 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.889 110.4 50.5 -60.9 -38.2 8.2 -9.2 21.7 58 15 B S H > S+ 0 0 72 1,-0.2 4,-2.1 2,-0.2 -1,-0.2 0.869 110.4 49.8 -65.3 -39.3 10.4 -9.2 24.8 59 16 B L H X S+ 0 0 60 -4,-2.2 4,-2.6 2,-0.2 -2,-0.2 0.830 107.8 52.8 -69.2 -37.8 11.2 -5.5 24.3 60 17 B I H X S+ 0 0 16 -4,-2.2 4,-2.9 2,-0.2 5,-0.2 0.935 109.6 48.8 -65.3 -47.7 7.6 -4.6 24.0 61 18 B E H X S+ 0 0 43 -4,-2.1 4,-2.5 2,-0.2 -2,-0.2 0.911 111.5 50.0 -56.2 -46.0 6.8 -6.4 27.2 62 19 B E H X S+ 0 0 113 -4,-2.1 4,-1.8 2,-0.2 -2,-0.2 0.914 110.8 49.9 -55.8 -45.4 9.7 -4.6 28.9 63 20 B S H X S+ 0 0 7 -4,-2.6 4,-2.2 1,-0.2 -2,-0.2 0.950 111.0 49.3 -58.6 -47.6 8.4 -1.3 27.6 64 21 B Q H X S+ 0 0 83 -4,-2.9 4,-2.2 1,-0.3 -2,-0.2 0.863 106.5 55.8 -62.8 -35.9 4.9 -2.1 28.9 65 22 B N H X S+ 0 0 103 -4,-2.5 4,-2.6 1,-0.2 -1,-0.3 0.886 107.7 49.5 -63.4 -36.0 6.4 -3.0 32.3 66 23 B Q H X S+ 0 0 95 -4,-1.8 4,-2.4 2,-0.2 -2,-0.2 0.906 106.2 55.2 -69.7 -38.3 7.9 0.5 32.4 67 24 B Q H X S+ 0 0 35 -4,-2.2 4,-1.8 1,-0.2 -2,-0.2 0.925 111.2 46.2 -58.8 -42.6 4.6 2.1 31.5 68 25 B E H X S+ 0 0 88 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.927 107.8 54.2 -63.6 -48.4 3.1 0.3 34.5 69 26 B K H X S+ 0 0 62 -4,-2.6 4,-1.7 1,-0.2 -1,-0.2 0.887 110.3 50.1 -53.0 -38.6 6.0 1.3 36.8 70 27 B N H X S+ 0 0 14 -4,-2.4 4,-2.3 2,-0.2 -1,-0.2 0.856 106.7 52.7 -69.2 -39.8 5.2 4.9 35.7 71 28 B E H X S+ 0 0 75 -4,-1.8 4,-1.8 2,-0.2 -2,-0.2 0.836 109.5 51.3 -60.4 -34.2 1.5 4.5 36.5 72 29 B Q H X S+ 0 0 87 -4,-2.2 4,-2.2 2,-0.2 -2,-0.2 0.873 108.0 50.5 -72.9 -37.7 2.5 3.3 39.9 73 30 B E H X S+ 0 0 94 -4,-1.7 4,-2.9 2,-0.2 5,-0.2 0.921 108.3 53.5 -62.6 -44.1 4.8 6.4 40.5 74 31 B L H X S+ 0 0 45 -4,-2.3 4,-2.4 1,-0.2 -2,-0.2 0.905 110.1 47.3 -54.3 -46.8 1.8 8.6 39.5 75 32 B L H X S+ 0 0 107 -4,-1.8 4,-1.5 2,-0.2 -1,-0.2 0.899 112.1 49.2 -64.2 -37.4 -0.3 6.9 42.1 76 33 B E H X S+ 0 0 145 -4,-2.2 4,-2.3 1,-0.2 -2,-0.2 0.881 111.4 51.8 -69.4 -36.6 2.5 7.3 44.7 77 34 B L H X S+ 0 0 8 -4,-2.9 4,-2.5 2,-0.2 5,-0.3 0.901 108.1 49.0 -60.8 -47.2 2.8 11.0 43.8 78 35 B D H X S+ 0 0 58 -4,-2.4 4,-1.6 -5,-0.2 -1,-0.2 0.881 109.2 53.9 -72.5 -22.8 -0.8 11.6 44.2 79 36 B K H X S+ 0 0 77 -4,-1.5 4,-2.0 2,-0.2 -2,-0.2 0.938 110.9 44.4 -71.1 -50.2 -0.8 9.9 47.6 80 37 B W H X S+ 0 0 145 -4,-2.3 4,-2.7 2,-0.2 5,-0.2 0.916 113.5 50.9 -56.9 -46.1 2.2 12.1 48.9 81 38 B A H X S+ 0 0 0 -4,-2.5 4,-2.8 1,-0.2 -1,-0.2 0.881 109.2 52.2 -58.0 -39.7 0.6 15.3 47.5 82 39 B S H X S+ 0 0 59 -4,-1.6 4,-2.4 -5,-0.3 -1,-0.2 0.891 111.2 46.0 -66.1 -41.4 -2.7 14.3 49.2 83 40 B L H X S+ 0 0 98 -4,-2.0 4,-2.6 2,-0.2 -2,-0.2 0.894 112.5 50.1 -69.7 -40.8 -1.0 13.8 52.6 84 41 B W H X S+ 0 0 61 -4,-2.7 4,-2.5 2,-0.2 -2,-0.2 0.935 111.9 48.8 -60.3 -43.8 0.9 17.2 52.2 85 42 B N H X S+ 0 0 28 -4,-2.8 4,-2.6 1,-0.2 5,-0.2 0.923 109.3 52.6 -61.3 -44.0 -2.4 18.9 51.4 86 43 B W H X S+ 0 0 157 -4,-2.4 4,-2.9 1,-0.2 5,-0.3 0.913 109.1 50.4 -55.2 -47.7 -4.0 17.2 54.4 87 44 B F H X S+ 0 0 108 -4,-2.6 4,-2.9 2,-0.2 5,-0.2 0.941 110.7 47.9 -58.9 -43.3 -1.2 18.6 56.6 88 45 B N H X S+ 0 0 41 -4,-2.5 4,-2.3 1,-0.2 -2,-0.2 0.935 114.5 45.6 -63.3 -42.7 -1.6 22.1 55.3 89 46 B I H X S+ 0 0 79 -4,-2.6 4,-2.8 2,-0.2 -1,-0.2 0.911 114.8 47.9 -64.0 -44.6 -5.4 22.1 55.8 90 47 B T H X S+ 0 0 34 -4,-2.9 4,-2.1 -5,-0.2 -2,-0.2 0.924 111.0 50.1 -68.0 -41.3 -5.1 20.6 59.2 91 48 B N H X S+ 0 0 96 -4,-2.9 4,-1.2 -5,-0.3 -1,-0.2 0.916 113.0 48.6 -61.7 -39.8 -2.4 23.1 60.3 92 49 B W H < S+ 0 0 196 -4,-2.3 3,-0.4 -5,-0.2 -2,-0.2 0.941 109.8 49.9 -64.9 -45.6 -4.7 25.9 59.0 93 50 B L H < S+ 0 0 102 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.869 118.0 40.7 -59.6 -35.9 -7.8 24.6 60.8 94 51 B W H < 0 0 207 -4,-2.1 -1,-0.2 -5,-0.2 -2,-0.2 0.593 360.0 360.0 -94.7 -10.3 -5.8 24.3 64.1 95 52 B Y < 0 0 248 -4,-1.2 -1,-0.2 -3,-0.4 -2,-0.2 0.883 360.0 360.0 -61.7 360.0 -3.9 27.6 63.6