==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=31-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER VIRAL PROTEIN 12-JUL-06 2HN8 . COMPND 2 MOLECULE: PROTEIN PB1-F2; . SOURCE 2 SYNTHETIC: YES; . AUTHOR K.BRUNS,N.STUDTRUCKER,A.SHARMA,T.FOSSEN,D.MITZNER, . 38 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3994.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 32 84.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 7.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 29 76.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 144 0, 0.0 5,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 168.5 -25.6 1.1 0.2 2 2 A M >> - 0 0 102 1,-0.2 4,-2.6 2,-0.1 3,-2.2 -0.470 360.0-137.9 -64.6 115.3 -25.3 -2.2 2.0 3 3 A P H 3> S+ 0 0 92 0, 0.0 4,-0.5 0, 0.0 -1,-0.2 0.721 107.1 43.6 -44.1 -27.5 -23.8 -1.4 5.5 4 4 A K H 3> S+ 0 0 139 3,-0.2 4,-1.2 2,-0.2 -2,-0.1 0.627 111.9 51.7 -94.9 -19.2 -21.7 -4.5 5.1 5 5 A Q H <> S+ 0 0 86 -3,-2.2 4,-1.5 2,-0.2 -1,-0.1 0.777 114.3 41.5 -89.1 -28.4 -20.7 -3.8 1.5 6 6 A I H X S+ 0 0 67 -4,-2.6 4,-3.9 2,-0.2 -2,-0.2 0.777 117.2 48.5 -86.9 -26.6 -19.6 -0.2 2.1 7 7 A V H X S+ 0 0 62 -4,-0.5 4,-5.9 -5,-0.5 5,-0.2 0.902 110.9 51.0 -75.4 -41.1 -17.9 -1.3 5.3 8 8 A Y H < S+ 0 0 152 -4,-1.2 -2,-0.2 2,-0.2 -1,-0.2 0.942 116.8 41.2 -57.1 -48.0 -16.3 -4.1 3.4 9 9 A W H >X S+ 0 0 147 -4,-1.5 4,-3.1 2,-0.2 3,-2.8 0.993 118.0 46.3 -58.9 -63.4 -15.2 -1.5 1.0 10 10 A K H 3X S+ 0 0 115 -4,-3.9 4,-2.4 1,-0.3 5,-0.4 0.890 113.1 48.5 -44.6 -53.7 -14.3 0.9 3.7 11 11 A Q H 3< S+ 0 0 98 -4,-5.9 -1,-0.3 1,-0.2 5,-0.2 0.428 117.0 46.5 -73.6 4.4 -12.5 -1.8 5.6 12 12 A W H <> S+ 0 0 141 -3,-2.8 4,-0.6 -5,-0.2 -2,-0.3 0.708 120.5 32.4-112.3 -37.4 -10.8 -2.6 2.3 13 13 A L H < S+ 0 0 88 -4,-3.1 -3,-0.2 3,-0.2 -2,-0.2 0.565 118.6 55.6 -97.5 -10.1 -9.8 0.8 1.1 14 14 A S T < S+ 0 0 53 -4,-2.4 -3,-0.2 -5,-0.5 -1,-0.1 0.896 122.7 23.2 -85.1 -45.1 -9.3 2.2 4.6 15 15 A L T > S+ 0 0 84 -5,-0.4 4,-2.1 2,-0.2 5,-0.3 0.943 121.8 52.8 -83.8 -58.7 -6.8 -0.4 5.7 16 16 A R H X S+ 0 0 127 -4,-0.6 4,-1.7 -5,-0.2 -3,-0.2 0.808 106.6 63.2 -47.0 -31.1 -5.4 -1.6 2.4 17 17 A N H >> S+ 0 0 77 2,-0.2 4,-2.0 1,-0.2 3,-1.8 0.992 107.7 32.5 -58.6 -79.8 -4.7 2.1 1.7 18 18 A P H 3> S+ 0 0 74 0, 0.0 4,-2.9 0, 0.0 -1,-0.2 0.748 118.0 61.3 -51.7 -22.8 -2.2 3.0 4.4 19 19 A I H 3X S+ 0 0 67 -4,-2.1 4,-1.2 2,-0.2 -2,-0.2 0.845 102.3 48.0 -74.6 -32.7 -1.0 -0.5 4.0 20 20 A L H