==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=20-JUL-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER HYDROLASE 17-JUL-06 2HPJ . COMPND 2 MOLECULE: PNGASE; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR G.ZHAO,X.ZHOU,L.WANG,G.LI,W.LENNARZ,H.SCHINDELIN . 99 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5821.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 70 70.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 7 7.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 2.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 12.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 45 45.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 3 3.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 2 0 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 12 A S 0 0 121 0, 0.0 2,-0.4 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 106.9 29.5 45.8 3.5 2 13 A A - 0 0 96 4,-0.0 0, 0.0 5,-0.0 0, 0.0 -0.765 360.0-173.4-126.6 89.4 30.2 49.2 1.7 3 14 A S > - 0 0 11 -2,-0.4 4,-2.2 1,-0.2 5,-0.2 -0.647 20.4-159.9 -86.2 119.8 32.2 51.5 4.0 4 15 A P H > S+ 0 0 97 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.910 96.2 52.0 -62.7 -36.5 32.8 55.1 3.0 5 16 A A H > S+ 0 0 4 2,-0.2 4,-2.8 1,-0.2 58,-0.2 0.925 110.0 45.7 -66.8 -45.4 35.8 55.2 5.4 6 17 A V H > S+ 0 0 10 2,-0.2 4,-2.1 1,-0.2 -1,-0.2 0.915 112.5 52.9 -63.7 -40.0 37.5 52.1 4.1 7 18 A A H < S+ 0 0 52 -4,-2.2 4,-0.3 2,-0.2 -2,-0.2 0.922 112.1 45.3 -60.4 -43.2 36.9 53.3 0.5 8 19 A E H >< S+ 0 0 76 -4,-2.4 3,-1.8 1,-0.2 4,-0.3 0.921 108.8 55.3 -68.1 -42.9 38.6 56.6 1.4 9 20 A L H >< S+ 0 0 0 -4,-2.8 3,-1.5 50,-0.3 -1,-0.2 0.891 103.2 57.7 -53.6 -38.7 41.4 54.9 3.2 10 21 A C T 3< S+ 0 0 43 -4,-2.1 -1,-0.3 1,-0.3 -2,-0.2 0.540 90.4 71.6 -72.2 -8.0 42.1 52.9 0.0 11 22 A Q T < S+ 0 0 116 -3,-1.8 -1,-0.3 -4,-0.3 -2,-0.2 0.560 81.1 98.1 -83.9 -9.5 42.6 56.1 -2.0 12 23 A N S < S- 0 0 30 -3,-1.5 45,-0.0 -4,-0.3 -3,-0.0 -0.270 91.8 -82.9 -70.6 163.3 45.9 56.7 -0.2 13 24 A T > - 0 0 82 1,-0.1 4,-3.3 4,-0.1 5,-0.3 -0.280 46.0-106.9 -61.6 151.9 49.3 55.7 -1.7 14 25 A P H > S+ 0 0 105 0, 0.0 4,-2.4 0, 0.0 5,-0.2 0.928 119.9 47.3 -48.7 -45.4 50.1 52.1 -1.2 15 26 A E H > S+ 0 0 166 2,-0.2 4,-2.1 1,-0.2 5,-0.1 0.922 115.2 43.6 -66.1 -43.5 52.8 52.9 1.5 16 27 A T H > S+ 0 0 46 1,-0.2 4,-2.5 2,-0.2 5,-0.3 0.902 112.5 54.0 -67.9 -40.7 50.5 55.3 3.5 17 28 A F H X S+ 0 0 20 -4,-3.3 4,-2.7 1,-0.2 5,-0.3 0.931 109.4 48.4 -55.6 -46.5 47.6 52.9 3.2 18 29 A L H X S+ 0 0 83 -4,-2.4 4,-2.0 -5,-0.3 -2,-0.2 0.921 111.8 49.2 -64.0 -42.3 49.8 50.1 4.6 19 30 A E H X S+ 0 0 91 -4,-2.1 4,-1.5 2,-0.2 -2,-0.2 0.944 117.6 37.9 -62.5 -51.4 51.0 52.2 7.5 20 31 A A H X S+ 0 0 0 -4,-2.5 4,-2.5 1,-0.2 -2,-0.2 0.904 115.3 52.3 -68.0 -43.4 47.6 53.4 8.6 21 32 A S H X S+ 0 0 0 -4,-2.7 4,-2.5 -5,-0.3 5,-0.2 0.869 104.9 57.6 -65.3 -33.8 45.7 50.1 7.9 22 33 A K H X S+ 0 0 121 -4,-2.0 4,-2.1 -5,-0.3 -1,-0.2 0.940 109.5 44.3 -61.0 -46.8 48.3 48.3 10.0 23 34 A L H X S+ 0 0 17 -4,-1.5 4,-3.0 1,-0.2 5,-0.2 0.922 110.6 54.6 -62.9 -43.8 47.5 50.5 13.0 24 35 A L H X S+ 0 0 0 -4,-2.5 4,-2.2 1,-0.2 -1,-0.2 0.910 109.1 47.7 -57.8 -45.1 43.8 50.2 12.4 25 36 A L H X S+ 0 0 18 -4,-2.5 4,-3.1 2,-0.2 5,-0.3 0.914 111.3 52.1 -60.6 -42.4 44.0 46.4 12.5 26 37 A T H X S+ 0 0 46 -4,-2.1 4,-2.4 -5,-0.2 -2,-0.2 0.933 109.3 47.8 -59.0 -50.2 46.0 46.5 15.7 27 38 A Y H X S+ 0 0 28 -4,-3.0 4,-1.3 1,-0.2 -1,-0.2 0.937 116.6 44.1 -60.7 -42.3 43.5 48.8 17.5 28 39 A A H X S+ 0 0 0 -4,-2.2 4,-2.8 -5,-0.2 3,-0.3 0.945 114.3 47.8 -65.5 -50.5 40.6 46.6 16.4 29 40 A D H X S+ 0 0 24 -4,-3.1 4,-2.9 1,-0.2 5,-0.2 0.866 104.1 61.2 -62.3 -36.3 42.3 43.3 17.2 30 41 A N H < S+ 0 0 54 -4,-2.4 4,-0.5 -5,-0.3 -1,-0.2 0.908 113.9 36.6 -58.0 -40.1 43.5 44.5 20.6 31 42 A I H >< S+ 0 0 4 -4,-1.3 3,-0.9 -3,-0.3 -2,-0.2 0.942 116.6 51.4 -74.7 -51.2 39.8 44.9 21.6 32 43 A L H 3< S+ 0 0 36 -4,-2.8 -2,-0.2 1,-0.2 -3,-0.2 0.863 118.5 37.6 -56.0 -37.4 38.4 41.9 19.7 33 44 A R T 3< S+ 0 0 175 -4,-2.9 -1,-0.2 1,-0.2 -2,-0.2 0.492 122.5 42.3 -98.1 -5.0 41.0 39.5 21.3 34 45 A N X + 0 0 63 -3,-0.9 3,-1.9 -4,-0.5 -1,-0.2 -0.437 61.2 160.3-138.8 62.1 41.1 41.1 24.8 35 46 A P T 3 S+ 0 0 95 0, 0.0 -1,-0.1 0, 0.0 -2,-0.1 0.763 75.2 53.3 -56.9 -27.0 37.5 41.8 25.7 36 47 A S T 3 S+ 0 0 115 1,-0.1 2,-1.0 -3,-0.1 -5,-0.1 0.515 88.0 89.3 -87.6 -4.6 38.3 42.1 29.4 37 48 A D X - 0 0 52 -3,-1.9 3,-1.3 -6,-0.2 4,-0.2 -0.764 54.3-171.5-105.6 99.6 41.0 44.6 29.1 38 49 A E G > S+ 0 0 143 -2,-1.0 3,-1.6 1,-0.3 -1,-0.2 0.700 75.1 76.5 -60.9 -22.2 39.7 48.1 29.3 39 50 A K G > S+ 0 0 128 1,-0.3 3,-1.3 2,-0.1 -1,-0.3 0.860 87.8 59.1 -63.1 -32.4 43.0 49.7 28.4 40 51 A Y G < S+ 0 0 69 -3,-1.3 -1,-0.3 1,-0.3 -9,-0.2 0.610 89.9 73.4 -70.0 -9.9 42.5 48.8 24.7 41 52 A R G < S+ 0 0 59 -3,-1.6 37,-2.6 -4,-0.2 2,-0.4 0.280 93.2 61.5 -86.9 6.0 39.3 50.8 24.5 42 53 A S E < -A 77 0A 50 -3,-1.3 2,-0.4 35,-0.2 35,-0.2 -0.998 57.1-172.9-134.4 140.6 41.1 54.1 24.6 43 54 A I E -A 76 0A 12 33,-2.7 33,-2.8 -2,-0.4 2,-0.4 -0.998 28.4-126.1-127.8 126.2 43.6 55.6 22.2 44 55 A R E > -A 75 0A 128 -2,-0.4 3,-1.8 31,-0.2 31,-0.3 -0.583 8.8-143.3 -78.8 128.0 45.4 58.8 23.2 45 56 A I T 3 S+ 0 0 38 29,-2.6 -1,-0.1 -2,-0.4 30,-0.1 0.822 102.2 47.7 -61.1 -34.5 45.0 61.5 20.5 46 57 A G T 3 S+ 0 0 40 28,-0.5 -1,-0.3 4,-0.1 29,-0.1 0.394 78.6 128.2 -88.7 -0.2 48.6 62.8 21.3 47 58 A N <> - 0 0 62 -3,-1.8 4,-2.9 1,-0.1 5,-0.2 -0.349 65.8-127.6 -53.1 135.3 50.1 59.3 21.2 48 59 A T H > S+ 0 0 103 1,-0.2 4,-1.8 2,-0.2 5,-0.4 0.928 103.8 42.7 -61.9 -50.5 53.0 59.6 18.7 49 60 A A H >>S+ 0 0 22 2,-0.2 4,-2.6 1,-0.2 5,-0.6 0.933 118.5 46.2 -58.0 -45.7 52.2 56.7 16.4 50 61 A F H >>S+ 0 0 0 1,-0.2 5,-2.8 3,-0.2 4,-1.3 0.932 116.0 43.5 -65.9 -48.4 48.5 57.6 16.4 51 62 A S H <5S+ 0 0 42 -4,-2.9 -1,-0.2 3,-0.2 -2,-0.2 0.720 125.1 32.0 -71.0 -28.2 49.0 61.3 15.8 52 63 A T H <5S+ 0 0 86 -4,-1.8 -2,-0.2 -5,-0.2 -3,-0.2 0.738 129.6 29.6-102.6 -31.8 51.7 61.0 13.1 53 64 A R H <5S+ 0 0 95 -4,-2.6 -3,-0.2 -5,-0.4 -2,-0.2 0.561 130.5 23.0-106.7 -15.7 50.8 57.7 11.3 54 65 A L T >< S- 0 0 15 -3,-2.2 3,-2.3 1,-0.1 4,-0.6 -0.714 84.6-110.5 -94.2 122.7 45.8 59.9 6.8 58 69 A R T 34 S+ 0 0 123 -2,-0.5 -46,-0.2 1,-0.3 -47,-0.1 -0.220 100.2 5.6 -52.8 127.1 42.6 60.4 4.7 59 70 A G T 3> S+ 0 0 2 -4,-0.1 4,-1.6 -49,-0.1 -50,-0.3 0.160 100.9 105.6 91.1 -18.5 39.8 58.0 5.9 60 71 A A H <> S+ 0 0 0 -3,-2.3 4,-1.4 -6,-0.2 3,-0.4 0.956 81.2 40.4 -71.9 -48.8 41.8 56.6 8.8 61 72 A V H X S+ 0 0 20 -4,-0.6 4,-2.2 -7,-0.3 3,-0.3 0.916 112.1 58.3 -65.4 -33.3 40.0 58.2 11.7 62 73 A E H > S+ 0 0 90 1,-0.3 4,-2.8 2,-0.2 -1,-0.2 0.833 99.6 58.9 -63.8 -31.8 36.7 57.7 10.0 63 74 A C H X S+ 0 0 0 -4,-1.6 4,-2.0 -3,-0.4 -1,-0.3 0.911 106.0 48.4 -59.0 -42.9 37.5 54.0 10.0 64 75 A L H X>S+ 0 0 0 -4,-1.4 5,-2.3 -3,-0.3 4,-1.0 0.918 111.0 50.3 -64.3 -43.0 37.7 54.2 13.8 65 76 A F H ><5S+ 0 0 77 -4,-2.2 3,-0.8 1,-0.2 -2,-0.2 0.931 110.2 49.1 -61.5 -42.8 34.4 56.1 14.0 66 77 A E H 3<5S+ 0 0 46 -4,-2.8 -1,-0.2 1,-0.2 -2,-0.2 0.854 105.3 59.1 -63.9 -32.1 32.7 53.5 11.8 67 78 A M H 3<5S- 0 0 0 -4,-2.0 -1,-0.2 -5,-0.2 -2,-0.2 0.750 129.9 -96.3 -62.3 -29.3 34.2 50.8 14.1 68 79 A G T <<5S+ 0 0 22 -4,-1.0 -3,-0.2 -3,-0.8 -2,-0.1 0.303 76.5 141.7 126.6 -3.4 32.4 52.4 17.0 69 80 A F < - 0 0 6 -5,-2.3 2,-0.4 9,-0.2 -1,-0.3 -0.373 34.0-155.0 -65.2 149.2 35.0 54.7 18.6 70 81 A E E -B 77 0A 85 7,-2.9 7,-2.7 -2,-0.0 2,-0.6 -0.937 18.0-115.1-121.9 147.1 33.9 58.1 19.8 71 82 A E E +B 76 0A 127 -2,-0.4 5,-0.2 5,-0.2 2,-0.2 -0.729 33.4 176.5 -89.6 120.7 36.1 61.1 20.2 72 83 A G - 0 0 32 3,-2.5 -27,-0.0 -2,-0.6 0, 0.0 -0.403 48.7 -86.5-100.7-174.1 36.7 62.6 23.7 73 84 A E S S+ 0 0 187 1,-0.2 3,-0.1 -2,-0.2 -2,-0.0 0.903 120.2 7.6 -65.3 -44.1 39.0 65.5 24.6 74 85 A T S S+ 0 0 91 1,-0.2 -29,-2.6 -29,-0.1 -28,-0.5 0.542 130.0 35.3-114.8 -19.1 42.3 63.6 25.0 75 86 A H E -A 44 0A 57 -31,-0.3 -3,-2.5 -30,-0.1 2,-0.4 -0.979 67.4-124.1-136.6 154.3 41.4 60.0 23.7 76 87 A L E -AB 43 71A 1 -33,-2.8 -33,-2.7 -2,-0.3 2,-0.4 -0.804 39.4-158.4 -87.4 139.0 39.2 58.1 21.3 77 88 A I E -AB 42 70A 67 -7,-2.7 -7,-2.9 -2,-0.4 -35,-0.2 -0.982 23.1-145.3-128.0 132.5 37.1 55.7 23.3 78 89 A F - 0 0 2 -37,-2.6 -9,-0.2 -2,-0.4 -37,-0.0 -0.876 41.3-141.7 -94.0 104.4 35.4 52.5 22.3 79 90 A P > - 0 0 17 0, 0.0 3,-1.6 0, 0.0 -37,-0.0 -0.116 18.0-108.8 -76.3 165.1 32.4 52.9 24.5 80 91 A K T 3 S+ 0 0 202 1,-0.3 -2,-0.0 3,-0.0 0, 0.0 0.854 117.9 55.7 -55.6 -35.5 30.5 50.3 26.5 81 92 A K T 3 S+ 0 0 155 2,-0.1 -1,-0.3 -13,-0.1 2,-0.2 0.607 82.7 113.6 -72.2 -15.2 27.5 50.6 24.1 82 93 A A < - 0 0 16 -3,-1.6 2,-0.3 1,-0.1 -14,-0.1 -0.418 68.8-119.7 -71.2 136.0 29.6 49.8 21.0 83 94 A S > - 0 0 50 -2,-0.2 4,-1.7 1,-0.1 5,-0.1 -0.517 6.9-153.6 -72.7 128.2 28.9 46.6 19.0 84 95 A V H > S+ 0 0 75 -2,-0.3 4,-3.0 1,-0.2 5,-0.2 0.846 98.1 63.3 -64.4 -31.8 31.8 44.2 18.7 85 96 A E H > S+ 0 0 155 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.916 104.3 44.2 -58.4 -44.2 30.0 43.1 15.5 86 97 A Q H > S+ 0 0 60 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.876 111.7 53.2 -70.0 -38.4 30.5 46.5 13.9 87 98 A L H X S+ 0 0 0 -4,-1.7 4,-2.1 1,-0.2 -2,-0.2 0.950 111.5 46.8 -58.1 -51.2 34.1 46.6 15.1 88 99 A Q H X S+ 0 0 74 -4,-3.0 4,-2.9 1,-0.2 -2,-0.2 0.879 105.8 60.3 -58.2 -44.0 34.7 43.2 13.4 89 100 A K H X S+ 0 0 59 -4,-2.3 4,-2.0 -5,-0.2 -1,-0.2 0.943 110.2 39.8 -48.9 -54.0 33.0 44.4 10.2 90 101 A I H X S+ 0 0 0 -4,-1.8 4,-2.4 2,-0.2 5,-0.2 0.889 112.1 56.0 -70.3 -39.4 35.4 47.2 9.6 91 102 A R H X S+ 0 0 48 -4,-2.1 4,-2.5 -5,-0.2 -1,-0.2 0.956 110.0 47.7 -51.0 -50.6 38.4 45.1 10.7 92 103 A D H X S+ 0 0 70 -4,-2.9 4,-2.1 1,-0.2 -2,-0.2 0.907 110.0 51.0 -61.8 -41.1 37.4 42.5 8.1 93 104 A L H X S+ 0 0 29 -4,-2.0 4,-1.3 -5,-0.2 -1,-0.2 0.914 112.7 46.2 -65.0 -42.3 37.0 45.1 5.3 94 105 A I H X S+ 0 0 0 -4,-2.4 4,-1.5 2,-0.2 -1,-0.2 0.910 109.8 53.9 -63.5 -46.3 40.4 46.6 6.0 95 106 A A H X S+ 0 0 20 -4,-2.5 4,-1.6 -5,-0.2 -2,-0.2 0.893 105.0 54.7 -58.8 -39.2 42.1 43.2 6.2 96 107 A I H < S+ 0 0 111 -4,-2.1 -1,-0.2 1,-0.2 -2,-0.2 0.904 109.4 47.8 -60.5 -39.8 40.7 42.3 2.7 97 108 A E H < S+ 0 0 98 -4,-1.3 -1,-0.2 1,-0.2 -2,-0.2 0.753 108.5 52.3 -76.1 -26.1 42.2 45.4 1.3 98 109 A R H < 0 0 74 -4,-1.5 -1,-0.2 1,-0.3 -2,-0.2 0.739 360.0 360.0 -76.8 -28.6 45.6 44.8 3.0 99 110 A S < 0 0 139 -4,-1.6 -1,-0.3 -5,-0.2 -2,-0.0 -0.927 360.0 360.0 117.7 360.0 45.3 41.4 1.3