==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER SIGNALING PROTEIN 26-APR-01 1IP9 . COMPND 2 MOLECULE: BEM1 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; . AUTHOR H.TERASAWA,Y.NODA,T.ITO,H.HATANAKA,S.ICHIKAWA,K.OGURA, . 85 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5810.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 48 56.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 14.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 12 14.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 4.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 15 17.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A G 0 0 142 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 81.2 4.2 11.9 38.6 2 2 A A - 0 0 106 2,-0.0 2,-0.3 0, 0.0 0, 0.0 -0.547 360.0-152.1-110.7 179.8 2.8 12.7 35.2 3 3 A M - 0 0 144 -2,-0.2 0, 0.0 2,-0.1 0, 0.0 -0.996 18.3-149.2-153.8 147.9 2.9 10.8 31.9 4 4 A G S S+ 0 0 82 -2,-0.3 -1,-0.1 2,-0.0 -2,-0.0 0.805 76.4 87.1 -88.5 -31.1 2.8 11.6 28.1 5 5 A S - 0 0 100 1,-0.0 2,-0.3 0, 0.0 -2,-0.1 0.058 60.1-172.4 -56.8 179.5 1.0 8.5 27.0 6 6 A S - 0 0 95 2,-0.0 2,-0.4 0, 0.0 -2,-0.0 -0.910 32.9 -93.1-174.3 145.7 -2.9 8.5 27.1 7 7 A T - 0 0 140 -2,-0.3 2,-0.7 1,-0.1 0, 0.0 -0.501 39.1-150.2 -68.2 122.4 -5.8 6.1 26.6 8 8 A S + 0 0 114 -2,-0.4 2,-0.3 0, 0.0 -1,-0.1 -0.830 28.3 160.1 -98.4 114.0 -6.9 6.3 23.0 9 9 A G - 0 0 62 -2,-0.7 2,-0.2 21,-0.0 21,-0.1 -0.819 22.4-149.6-126.6 168.4 -10.6 5.6 22.5 10 10 A L - 0 0 104 19,-0.3 2,-0.6 -2,-0.3 20,-0.1 -0.602 29.5 -89.6-125.6-171.2 -13.1 6.3 19.8 11 11 A K - 0 0 187 -2,-0.2 17,-0.1 17,-0.0 19,-0.0 -0.900 42.4-113.3-108.1 121.4 -16.9 7.0 19.5 12 12 A T - 0 0 60 -2,-0.6 2,-0.4 15,-0.1 17,-0.2 -0.245 33.6-136.5 -50.1 124.4 -19.2 4.0 19.1 13 13 A T E -A 28 0A 23 15,-1.8 15,-1.5 1,-0.0 2,-0.8 -0.712 9.9-131.3 -88.3 133.6 -20.7 4.4 15.6 14 14 A K E +A 27 0A 115 -2,-0.4 2,-0.5 13,-0.2 13,-0.2 -0.730 31.5 175.0 -87.2 113.8 -24.4 3.7 15.4 15 15 A I E -A 26 0A 2 11,-2.0 11,-1.2 -2,-0.8 2,-0.7 -0.957 17.9-154.4-122.2 119.6 -25.1 1.3 12.5 16 16 A K E -A 25 0A 80 -2,-0.5 64,-1.3 9,-0.2 9,-0.3 -0.803 11.8-155.2 -95.3 115.5 -28.7 -0.0 11.9 17 17 A F E -A 24 0A 2 7,-1.1 7,-1.0 -2,-0.7 64,-0.3 -0.358 5.6-144.7 -80.6 166.5 -28.7 -3.4 10.1 18 18 A Y - 0 0 52 5,-0.2 64,-1.4 62,-0.2 2,-0.6 -0.494 17.9-179.9-134.6 70.9 -31.7 -4.4 8.1 19 19 A Y B > -b 82 0B 25 62,-0.2 3,-1.7 -2,-0.1 64,-0.2 -0.559 67.9 -50.3 -71.8 115.7 -32.3 -8.2 8.3 20 20 A K T 3 S- 0 0 125 62,-1.7 62,-0.2 -2,-0.6 63,-0.0 -0.251 117.6 -29.1 53.3-137.6 -35.4 -8.8 6.1 21 21 A D T 3 S+ 0 0 155 2,-0.0 -1,-0.3 0, 0.0 2,-0.1 0.591 128.6 83.2 -85.8 -8.1 -38.2 -6.4 7.2 22 22 A D < - 0 0 120 -3,-1.7 2,-0.3 -4,-0.1 0, 0.0 -0.500 63.1-164.5 -90.3 164.0 -36.7 -6.3 10.8 23 23 A I + 0 0 67 -5,-0.2 2,-0.2 -2,-0.1 -5,-0.2 -1.000 11.3 176.4-148.7 151.2 -33.8 -4.0 11.8 24 24 A F E -A 17 0A 21 -7,-1.0 -7,-1.1 -2,-0.3 2,-0.3 -0.734 20.5-124.7-139.4-172.5 -31.3 -3.7 14.7 25 25 A A E -A 16 0A 35 -9,-0.3 2,-0.3 -2,-0.2 -9,-0.2 -0.916 10.2-156.9-138.0 166.4 -28.3 -1.5 15.5 26 26 A L E -A 15 0A 13 -11,-1.2 -11,-2.0 -2,-0.3 2,-0.8 -0.991 10.1-147.9-146.3 136.7 -24.6 -1.9 16.5 27 27 A M E -A 14 0A 98 -2,-0.3 2,-0.6 -13,-0.2 -13,-0.2 -0.867 18.0-164.7-106.9 105.8 -22.2 0.4 18.4 28 28 A L E -A 13 0A 2 -15,-1.5 -15,-1.8 -2,-0.8 -2,-0.0 -0.786 13.7-168.1 -93.9 121.0 -18.6 -0.1 17.0 29 29 A K - 0 0 97 -2,-0.6 -19,-0.3 -17,-0.2 -1,-0.1 0.382 59.6 -95.9 -85.5 6.9 -15.9 1.3 19.2 30 30 A G S S+ 0 0 34 -17,-0.1 -2,-0.1 -20,-0.1 -1,-0.1 0.118 118.2 82.8 100.8 -22.5 -13.4 0.8 16.4 31 31 A D + 0 0 117 2,-0.0 -3,-0.1 40,-0.0 40,-0.1 0.637 67.7 105.6 -88.2 -13.4 -12.2 -2.5 17.7 32 32 A T - 0 0 9 1,-0.1 2,-0.3 4,-0.1 39,-0.1 0.099 51.7-169.6 -54.0-179.9 -15.2 -4.4 16.1 33 33 A T > - 0 0 18 1,-0.1 4,-1.7 37,-0.1 5,-0.1 -0.895 38.3 -95.3-157.4-173.9 -14.6 -6.5 13.0 34 34 A Y H > S+ 0 0 29 -2,-0.3 4,-1.5 2,-0.2 -1,-0.1 0.869 126.7 44.4 -83.7 -35.9 -16.5 -8.4 10.3 35 35 A K H > S+ 0 0 137 2,-0.2 4,-1.2 1,-0.2 -1,-0.2 0.789 111.5 56.2 -77.3 -22.8 -16.3 -11.7 12.2 36 36 A E H >> S+ 0 0 84 2,-0.2 4,-1.7 1,-0.2 3,-0.9 0.975 107.6 46.3 -69.6 -51.8 -17.2 -9.8 15.4 37 37 A L H 3X S+ 0 0 0 -4,-1.7 4,-1.6 1,-0.3 5,-0.4 0.867 101.8 70.0 -56.7 -34.4 -20.4 -8.5 13.7 38 38 A R H 3X S+ 0 0 129 -4,-1.5 4,-2.1 1,-0.3 -1,-0.3 0.918 106.4 36.1 -52.2 -44.6 -20.9 -12.1 12.6 39 39 A S H << S+ 0 0 88 -4,-1.2 -1,-0.3 -3,-0.9 -2,-0.2 0.771 114.6 57.0 -81.9 -23.5 -21.7 -13.1 16.2 40 40 A K H < S+ 0 0 74 -4,-1.7 -2,-0.2 -5,-0.1 -1,-0.2 0.640 118.0 33.7 -80.7 -11.8 -23.4 -9.8 16.9 41 41 A I H >X S+ 0 0 0 -4,-1.6 4,-1.1 -3,-0.2 3,-0.5 0.763 102.4 71.6-108.3 -41.9 -25.9 -10.5 14.0 42 42 A A H >X>S+ 0 0 20 -4,-2.1 4,-1.8 -5,-0.4 5,-1.1 0.881 104.8 42.6 -42.1 -50.7 -26.2 -14.3 14.1 43 43 A P H 345S+ 0 0 83 0, 0.0 -1,-0.3 0, 0.0 -2,-0.1 0.811 114.1 51.1 -70.7 -29.5 -28.3 -14.1 17.3 44 44 A R H <45S+ 0 0 150 -3,-0.5 -2,-0.2 1,-0.2 -3,-0.1 0.507 113.9 47.2 -85.2 -1.1 -30.3 -11.1 16.0 45 45 A I H <<5S- 0 0 0 -4,-1.1 -1,-0.2 -3,-0.8 -3,-0.2 0.723 102.0-126.8-105.5 -33.2 -31.0 -13.1 12.8 46 46 A D T <5S+ 0 0 149 -4,-1.8 2,-0.2 1,-0.4 -4,-0.1 0.480 85.3 72.1 93.9 5.7 -32.1 -16.4 14.2 47 47 A T S > S- 0 0 64 1,-0.1 4,-2.1 -32,-0.0 3,-0.7 -0.997 85.2-110.4-152.2 146.4 -14.0 -7.8 5.5 67 67 A D H 3> S+ 0 0 78 -2,-0.3 4,-2.0 1,-0.3 5,-0.1 0.775 121.9 55.3 -47.0 -23.0 -12.9 -6.1 8.8 68 68 A S H 3> S+ 0 0 76 2,-0.2 4,-1.4 1,-0.2 -1,-0.3 0.921 102.2 51.5 -79.7 -44.3 -12.3 -3.1 6.5 69 69 A Q H <> S+ 0 0 50 -3,-0.7 4,-2.4 1,-0.2 -2,-0.2 0.900 115.4 45.1 -60.1 -35.1 -15.8 -2.9 5.0 70 70 A V H X S+ 0 0 3 -4,-2.1 4,-1.6 2,-0.2 -2,-0.2 0.954 111.8 48.6 -73.7 -48.5 -17.1 -3.0 8.6 71 71 A S H X S+ 0 0 33 -4,-2.0 4,-1.7 -5,-0.3 -1,-0.2 0.720 113.2 53.1 -64.5 -13.5 -14.7 -0.4 9.9 72 72 A N H X S+ 0 0 96 -4,-1.4 4,-1.9 2,-0.2 5,-0.2 0.915 107.7 45.4 -85.5 -47.1 -15.8 1.6 6.8 73 73 A I H <>S+ 0 0 2 -4,-2.4 5,-1.6 1,-0.2 4,-0.2 0.743 115.4 54.8 -64.7 -17.2 -19.5 1.3 7.6 74 74 A I H <5S+ 0 0 5 -4,-1.6 -2,-0.2 3,-0.2 -1,-0.2 0.902 110.1 40.1 -81.8 -46.3 -18.1 2.3 11.0 75 75 A Q H <5S+ 0 0 148 -4,-1.7 -2,-0.2 1,-0.2 -3,-0.1 0.692 129.1 34.4 -77.2 -17.6 -16.3 5.5 10.0 76 76 A A T <5S- 0 0 52 -4,-1.9 -1,-0.2 -5,-0.1 -2,-0.2 0.376 102.0-131.8-115.5 0.6 -19.1 6.4 7.7 77 77 A K T 5 - 0 0 122 -5,-0.2 2,-0.4 -4,-0.2 -3,-0.2 0.946 34.7-171.8 44.3 78.8 -22.0 5.0 9.8 78 78 A L < - 0 0 48 -5,-1.6 2,-0.3 -63,-0.0 -23,-0.2 -0.854 28.0-116.6-104.1 136.8 -23.7 3.1 7.0 79 79 A K - 0 0 114 -2,-0.4 -24,-0.6 -24,-0.3 2,-0.3 -0.522 38.2-144.6 -68.3 126.2 -27.1 1.4 7.4 80 80 A I E - C 0 54B 0 -64,-1.3 2,-0.4 -2,-0.3 -26,-0.2 -0.666 7.4-148.8 -96.3 154.3 -26.4 -2.3 7.0 81 81 A S E - C 0 53B 9 -28,-1.9 -28,-1.7 -64,-0.3 2,-0.5 -0.914 9.3-153.9-118.3 144.2 -28.7 -4.8 5.3 82 82 A V E -bC 19 52B 0 -64,-1.4 -62,-1.7 -2,-0.4 2,-0.3 -0.964 11.0-176.9-124.7 130.5 -28.9 -8.5 6.4 83 83 A H E - C 0 51B 70 -32,-1.4 -32,-1.4 -2,-0.5 2,-0.5 -0.762 30.2-109.9-116.4 165.5 -30.0 -11.5 4.2 84 84 A D E C 0 50B 74 -2,-0.3 -34,-0.3 -34,-0.2 -2,-0.0 -0.804 360.0 360.0 -97.7 133.0 -30.3 -15.2 5.1 85 85 A I 0 0 110 -36,-2.2 -36,-0.3 -2,-0.5 -37,-0.2 -0.655 360.0 360.0-143.5 360.0 -27.8 -17.6 3.6