==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=29-APR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 31-AUG-09 3IUF . COMPND 2 MOLECULE: ZINC FINGER PROTEIN UBI-D4; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR W.TEMPEL,C.XU,C.BIAN,M.ADAMS-CIOABA,J.ERYILMAZ,C.BOUNTRA,J.W . 32 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2902.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 13 40.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 3 9.4 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 10 31.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 203 A E > 0 0 147 0, 0.0 4,-3.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -27.4 7.3 3.8 0.5 2 204 A D T 4 + 0 0 63 2,-0.2 0, 0.0 1,-0.2 0, 0.0 0.492 360.0 50.7 -65.0 -6.5 6.2 0.9 2.7 3 205 A R T 4 S+ 0 0 235 2,-0.1 -1,-0.2 3,-0.0 0, 0.0 0.788 115.3 38.6 -87.6 -45.7 2.8 2.3 1.5 4 206 A D T 4 S+ 0 0 116 1,-0.3 -2,-0.2 2,-0.1 0, 0.0 0.762 133.5 25.4 -72.9 -33.7 3.8 2.3 -2.1 5 207 A K S < S+ 0 0 68 -4,-3.3 -1,-0.3 1,-0.1 12,-0.2 -0.649 74.0 162.0-132.7 74.5 5.7 -1.0 -2.0 6 208 A P + 0 0 66 0, 0.0 2,-0.3 0, 0.0 11,-0.1 0.556 50.7 77.0 -78.1 -11.9 4.1 -2.8 1.0 7 209 A Y E -A 16 0A 80 9,-1.9 9,-2.1 11,-0.0 2,-0.3 -0.745 57.5-179.3-103.2 146.6 5.3 -6.3 0.2 8 210 A A E -A 15 0A 49 -2,-0.3 2,-0.3 7,-0.2 7,-0.2 -1.000 32.7-110.6-148.3 143.7 8.8 -7.7 0.8 9 211 A C > - 0 0 5 5,-2.1 4,-1.6 -2,-0.3 13,-0.0 -0.560 25.2-142.6 -67.6 131.3 10.8 -10.8 0.4 10 212 A D T 4 S+ 0 0 119 -2,-0.3 -1,-0.1 2,-0.2 16,-0.0 0.673 95.7 45.2 -69.9 -19.4 11.5 -12.3 3.8 11 213 A I T 4 S+ 0 0 116 3,-0.1 -1,-0.1 1,-0.0 19,-0.0 0.915 131.1 13.3 -91.0 -53.4 15.1 -13.4 2.8 12 214 A C T 4 S- 0 0 66 2,-0.1 -2,-0.2 0, 0.0 -1,-0.0 0.459 91.6-124.5-107.5 -5.4 16.5 -10.3 1.0 13 215 A G < + 0 0 40 -4,-1.6 -3,-0.1 1,-0.2 2,-0.0 0.427 47.7 163.5 76.1 1.6 14.0 -7.5 1.9 14 216 A K - 0 0 103 -6,-0.1 -5,-2.1 1,-0.1 2,-0.2 -0.307 30.9-135.4 -56.9 131.2 13.3 -6.6 -1.8 15 217 A R E -A 8 0A 103 -7,-0.2 2,-0.4 -9,-0.0 -7,-0.2 -0.634 20.2-169.6 -99.5 147.8 10.1 -4.6 -1.9 16 218 A Y E -A 7 0A 48 -9,-2.1 -9,-1.9 -2,-0.2 3,-0.1 -0.979 24.2-148.8-136.2 139.3 7.3 -5.0 -4.4 17 219 A K S S+ 0 0 58 -2,-0.4 2,-0.3 -12,-0.2 -1,-0.1 0.785 86.4 36.4 -75.2 -29.4 4.2 -2.9 -5.2 18 220 A N S > S- 0 0 102 1,-0.1 4,-1.6 -13,-0.1 3,-0.4 -0.928 76.1-125.1-130.4 150.7 2.1 -5.9 -6.1 19 221 A R H > S+ 0 0 168 -2,-0.3 4,-2.8 1,-0.2 5,-0.1 0.858 107.5 57.9 -64.5 -38.5 1.7 -9.4 -4.9 20 222 A P H > S+ 0 0 99 0, 0.0 4,-2.0 0, 0.0 -1,-0.2 0.873 104.2 54.3 -64.5 -29.9 2.2 -11.1 -8.3 21 223 A G H > S+ 0 0 30 -3,-0.4 4,-1.8 2,-0.2 -2,-0.2 0.945 113.3 41.3 -61.8 -52.1 5.7 -9.4 -8.5 22 224 A L H X S+ 0 0 26 -4,-1.6 4,-3.4 1,-0.2 5,-0.2 0.897 109.2 60.4 -63.7 -38.7 6.7 -10.8 -5.1 23 225 A S H X S+ 0 0 77 -4,-2.8 4,-2.3 1,-0.2 -2,-0.2 0.923 107.0 45.9 -53.0 -47.9 5.1 -14.2 -6.0 24 226 A Y H X S+ 0 0 166 -4,-2.0 4,-1.5 2,-0.2 -1,-0.2 0.925 114.8 46.9 -63.3 -46.8 7.5 -14.5 -9.0 25 227 A H H X S+ 0 0 21 -4,-1.8 4,-2.4 1,-0.2 3,-0.4 0.946 113.0 49.9 -59.9 -46.7 10.6 -13.5 -6.9 26 228 A Y H < S+ 0 0 150 -4,-3.4 -1,-0.2 1,-0.2 -2,-0.2 0.876 109.4 52.1 -61.0 -41.2 9.5 -15.8 -4.1 27 229 A A H < S+ 0 0 52 -4,-2.3 -1,-0.2 -5,-0.2 -2,-0.2 0.822 125.2 21.3 -63.1 -34.3 9.1 -18.8 -6.5 28 230 A H H < S+ 0 0 115 -4,-1.5 3,-0.4 -3,-0.4 2,-0.2 0.523 99.7 92.5-122.6 -7.9 12.5 -18.5 -8.1 29 231 A S S < S+ 0 0 35 -4,-2.4 -4,-0.0 1,-0.2 0, 0.0 -0.584 83.0 15.8 -95.8 152.6 15.0 -16.5 -5.8 30 232 A H S S+ 0 0 97 -2,-0.2 2,-0.3 1,-0.2 -1,-0.2 0.714 85.4 146.7 68.6 25.9 17.5 -17.8 -3.2 31 233 A L 0 0 125 -3,-0.4 -1,-0.2 1,-0.1 -3,-0.0 -0.669 360.0 360.0 -99.1 147.2 17.4 -21.4 -4.4 32 234 A A 0 0 157 -2,-0.3 -1,-0.1 0, 0.0 0, 0.0 -0.312 360.0 360.0 -64.6 360.0 20.2 -24.0 -4.4