==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=13-NOV-2011 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM/DNA 15-MAY-01 1J75 . COMPND 2 MOLECULE: 5'-D(*TP*CP*GP*CP*GP*CP*G)-3'; . SOURCE 2 SYNTHETIC: YES; . AUTHOR T.SCHWARTZ,J.BEHLKE,K.LOWENHAUPT,U.HEINEMANN,A.RICH . 57 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 3706.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 8 14.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 5.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 27 47.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 113 A N > 0 0 145 0, 0.0 4,-1.5 0, 0.0 5,-0.1 0.000 360.0 360.0 360.0 111.5 -13.6 -3.7 7.2 2 114 A L H > + 0 0 41 2,-0.2 4,-2.7 1,-0.2 5,-0.2 0.866 360.0 62.9 -59.6 -41.5 -14.8 -5.9 9.9 3 115 A E H > S+ 0 0 37 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.916 105.3 44.2 -54.3 -47.5 -14.1 -9.0 7.9 4 116 A Q H > S+ 0 0 115 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.891 112.6 52.6 -67.4 -38.2 -10.3 -8.2 7.8 5 117 A K H X S+ 0 0 75 -4,-1.5 4,-2.3 2,-0.2 -1,-0.2 0.886 109.7 48.6 -64.8 -40.2 -10.2 -7.4 11.4 6 118 A I H X S+ 0 0 0 -4,-2.7 4,-2.6 1,-0.2 5,-0.2 0.947 111.8 49.1 -63.5 -46.3 -11.9 -10.7 12.3 7 119 A L H X S+ 0 0 17 -4,-2.3 4,-2.4 -5,-0.2 -2,-0.2 0.889 111.1 50.0 -62.0 -39.4 -9.5 -12.6 10.2 8 120 A Q H X S+ 0 0 76 -4,-2.3 4,-2.8 2,-0.2 5,-0.3 0.921 110.3 49.7 -63.8 -49.6 -6.5 -10.8 11.7 9 121 A V H X S+ 0 0 9 -4,-2.3 4,-2.3 1,-0.2 -2,-0.2 0.943 114.6 44.4 -53.9 -51.0 -7.7 -11.5 15.3 10 122 A L H X S+ 0 0 0 -4,-2.6 4,-2.6 2,-0.2 46,-0.4 0.870 115.1 47.8 -63.1 -40.6 -8.2 -15.2 14.5 11 123 A S H < S+ 0 0 65 -4,-2.4 -2,-0.2 -5,-0.2 -1,-0.2 0.938 112.2 48.6 -68.9 -47.4 -4.9 -15.6 12.6 12 124 A D H < S+ 0 0 124 -4,-2.8 -2,-0.2 1,-0.2 -1,-0.2 0.910 113.7 47.4 -58.1 -46.9 -2.9 -13.8 15.3 13 125 A D H < S- 0 0 93 -4,-2.3 -2,-0.2 -5,-0.3 -1,-0.2 0.965 87.0-163.2 -60.3 -52.8 -4.5 -16.0 18.0 14 126 A G < + 0 0 66 -4,-2.6 -1,-0.1 1,-0.3 -3,-0.1 0.194 59.1 62.2 90.2 -20.1 -3.9 -19.2 16.1 15 127 A G S S- 0 0 18 1,-0.1 -1,-0.3 -5,-0.1 2,-0.2 -0.537 102.0 -46.3-125.9-168.6 -6.4 -21.2 18.1 16 128 A P - 0 0 83 0, 0.0 2,-0.4 0, 0.0 39,-0.2 -0.465 55.4-162.7 -67.5 127.1 -10.2 -21.4 19.0 17 129 A V E -A 54 0A 3 37,-3.1 37,-3.2 -2,-0.2 2,-0.2 -0.960 13.6-127.9-119.1 131.6 -11.5 -17.9 19.9 18 130 A K E >> -A 53 0A 97 -2,-0.4 4,-1.7 35,-0.2 3,-0.6 -0.488 20.4-121.2 -75.6 148.2 -14.7 -17.3 21.8 19 131 A I H 3> S+ 0 0 26 33,-2.0 4,-1.9 1,-0.3 3,-0.2 0.888 115.1 57.3 -54.6 -39.9 -17.3 -14.8 20.4 20 132 A G H 3> S+ 0 0 36 1,-0.3 4,-1.5 32,-0.2 -1,-0.3 0.867 104.3 50.7 -60.4 -39.2 -16.9 -12.8 23.5 21 133 A Q H <> S+ 0 0 101 -3,-0.6 4,-1.7 1,-0.2 -1,-0.3 0.846 107.1 54.5 -69.3 -33.7 -13.2 -12.4 23.0 22 134 A L H X S+ 0 0 0 -4,-1.7 4,-3.3 2,-0.2 5,-0.4 0.853 101.8 58.9 -66.7 -37.3 -13.9 -11.2 19.4 23 135 A V H X S+ 0 0 49 -4,-1.9 4,-2.5 2,-0.2 5,-0.4 0.945 108.6 44.4 -54.0 -49.1 -16.2 -8.5 20.8 24 136 A K H < S+ 0 0 166 -4,-1.5 -1,-0.2 1,-0.2 -2,-0.2 0.898 119.2 42.6 -61.6 -41.2 -13.4 -7.0 22.9 25 137 A K H < S+ 0 0 128 -4,-1.7 -2,-0.2 1,-0.2 -1,-0.2 0.847 125.2 32.6 -75.9 -36.7 -10.9 -7.3 20.0 26 138 A C H < S- 0 0 14 -4,-3.3 -2,-0.2 2,-0.2 -3,-0.2 0.581 93.0-139.2 -99.1 -16.1 -13.2 -6.0 17.3 27 139 A Q < + 0 0 171 -4,-2.5 -3,-0.1 -5,-0.4 -4,-0.1 0.870 64.1 106.8 60.1 42.5 -15.3 -3.6 19.3 28 140 A V S S- 0 0 36 -5,-0.4 -1,-0.2 -6,-0.2 -2,-0.2 -0.947 75.6 -84.6-143.1 157.4 -18.6 -4.5 17.7 29 141 A P > - 0 0 79 0, 0.0 4,-1.9 0, 0.0 5,-0.2 -0.162 35.3-112.8 -64.9 155.6 -21.6 -6.4 19.0 30 142 A K H > S+ 0 0 52 1,-0.2 4,-3.0 2,-0.2 5,-0.2 0.882 114.8 55.3 -57.5 -47.1 -21.9 -10.2 18.9 31 143 A K H > S+ 0 0 168 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.931 108.3 49.5 -53.6 -48.3 -24.8 -10.1 16.4 32 144 A T H > S+ 0 0 48 1,-0.2 4,-1.2 2,-0.2 -1,-0.2 0.890 112.0 48.2 -59.6 -40.1 -22.7 -8.1 14.0 33 145 A L H X S+ 0 0 0 -4,-1.9 4,-3.3 1,-0.2 -2,-0.2 0.928 109.8 51.7 -65.0 -45.9 -19.8 -10.4 14.3 34 146 A N H X S+ 0 0 40 -4,-3.0 4,-2.8 1,-0.2 5,-0.4 0.881 101.6 59.5 -64.4 -35.3 -21.9 -13.5 13.8 35 147 A Q H X S+ 0 0 125 -4,-2.3 4,-1.0 -5,-0.2 -1,-0.2 0.936 115.8 36.2 -56.3 -44.9 -23.4 -12.2 10.6 36 148 A V H X S+ 0 0 18 -4,-1.2 4,-3.3 -3,-0.2 5,-0.2 0.943 116.1 53.7 -72.4 -47.9 -19.8 -12.0 9.2 37 149 A L H X S+ 0 0 0 -4,-3.3 4,-2.5 1,-0.2 -2,-0.2 0.910 109.6 46.8 -54.3 -47.1 -18.5 -15.1 10.9 38 150 A Y H X S+ 0 0 124 -4,-2.8 4,-1.8 2,-0.2 -1,-0.2 0.845 112.8 50.4 -69.0 -30.5 -21.3 -17.3 9.6 39 151 A R H X S+ 0 0 98 -4,-1.0 4,-1.3 -5,-0.4 3,-0.4 0.978 110.6 48.4 -67.5 -50.6 -20.8 -15.9 6.1 40 152 A L H <>S+ 0 0 0 -4,-3.3 5,-2.7 1,-0.2 3,-0.5 0.883 110.6 53.7 -54.5 -38.5 -17.0 -16.5 6.3 41 153 A K H ><5S+ 0 0 96 -4,-2.5 3,-1.9 1,-0.3 -1,-0.2 0.887 104.6 51.8 -65.5 -39.8 -17.8 -20.1 7.5 42 154 A K H 3<5S+ 0 0 180 -4,-1.8 -1,-0.3 -3,-0.4 -2,-0.2 0.707 107.6 55.5 -69.7 -20.2 -20.1 -20.7 4.5 43 155 A E T 3<5S- 0 0 87 -4,-1.3 -1,-0.3 -3,-0.5 -2,-0.2 0.221 116.4-117.7 -92.3 10.2 -17.2 -19.6 2.4 44 156 A D T < 5S+ 0 0 143 -3,-1.9 -3,-0.2 -5,-0.1 -2,-0.1 0.767 84.6 118.1 56.9 28.6 -14.9 -22.2 4.0 45 157 A R S S-B 53 0A 101 3,-0.6 3,-1.9 -3,-0.1 2,-0.0 -0.958 105.0 -74.3-142.8 162.8 -17.2 -25.6 19.0 51 163 A P T 3 S- 0 0 107 0, 0.0 3,-0.1 0, 0.0 -3,-0.0 -0.323 116.6 -1.4 -64.8 133.6 -20.4 -23.5 19.4 52 164 A A T 3 S+ 0 0 43 1,-0.2 -33,-2.0 -34,-0.1 2,-0.4 0.753 111.5 113.9 56.6 26.1 -19.8 -19.8 19.5 53 165 A T E < -AB 18 50A 2 -3,-1.9 -3,-0.6 -35,-0.2 2,-0.3 -0.990 47.4-168.5-127.7 137.4 -16.1 -20.6 19.1 54 166 A W E +A 17 0A 0 -37,-3.2 -37,-3.1 -2,-0.4 2,-0.3 -0.934 12.5 167.6-134.7 147.1 -14.1 -19.7 15.9 55 167 A S E - B 0 47A 18 -8,-2.1 -8,-2.0 -2,-0.3 2,-0.2 -0.958 44.0 -76.1-146.6 173.4 -10.8 -20.3 14.3 56 168 A I E B 0 46A 80 -46,-0.4 -10,-0.2 -2,-0.3 -11,-0.1 -0.459 360.0 360.0 -78.2 138.9 -9.0 -19.9 11.0 57 169 A G 0 0 49 -12,-1.0 -12,-0.3 -2,-0.2 -11,-0.2 0.606 360.0 360.0 94.3 360.0 -9.9 -22.3 8.2