==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER CYTOKINE 21-MAY-01 1J8I . COMPND 2 MOLECULE: LYMPHOTACTIN; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR E.S.KULOGLU,D.R.MCCASLIN,J.L.MARKLEY,C.D.PAUZA,B.F.VOLKMAN . 93 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 8538.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 41 44.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 12 12.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 7.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 8.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 13 14.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A V 0 0 213 0, 0.0 2,-0.3 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 -53.1 -12.8 6.7 -27.7 2 2 A G + 0 0 61 2,-0.0 2,-0.3 0, 0.0 4,-0.0 -0.865 360.0 111.7-175.6 140.2 -9.9 8.8 -26.4 3 3 A S - 0 0 97 -2,-0.3 3,-0.0 0, 0.0 0, 0.0 -0.967 59.4 -47.7 174.3-172.6 -9.2 11.4 -23.7 4 4 A E S S+ 0 0 151 -2,-0.3 -2,-0.0 1,-0.1 0, 0.0 -0.118 105.9 33.1 -73.8 175.9 -7.2 12.1 -20.6 5 5 A V + 0 0 99 1,-0.1 -1,-0.1 2,-0.0 4,-0.0 0.893 60.9 168.0 36.6 87.0 -7.1 9.8 -17.6 6 6 A S S S+ 0 0 106 2,-0.1 -1,-0.1 -3,-0.0 -2,-0.1 0.474 82.1 11.6-102.5 -8.0 -7.3 6.4 -19.4 7 7 A D S S- 0 0 95 4,-0.0 2,-0.0 5,-0.0 -3,-0.0 0.539 92.9-157.5-133.2 -45.5 -6.3 4.5 -16.3 8 8 A K - 0 0 127 1,-0.1 38,-0.2 2,-0.1 4,-0.1 -0.181 28.7 -90.4 84.4 178.5 -6.5 6.9 -13.4 9 9 A R S S+ 0 0 199 2,-0.2 37,-0.1 -2,-0.0 -1,-0.1 0.918 113.8 29.4 -91.2 -66.9 -4.8 6.5 -10.0 10 10 A T S S- 0 0 42 1,-0.2 2,-0.3 2,-0.0 -2,-0.1 0.982 109.2-103.9 -56.7 -84.2 -7.1 4.6 -7.8 11 11 A a - 0 0 12 36,-0.2 -1,-0.2 1,-0.2 -2,-0.2 -0.888 20.3 -94.9-178.0-154.3 -9.1 2.4 -10.2 12 12 A V S S- 0 0 132 1,-0.4 -1,-0.2 -2,-0.3 2,-0.1 0.714 87.0 -6.1-112.4 -75.6 -12.4 2.1 -11.9 13 13 A S S S- 0 0 81 2,-0.2 2,-0.7 35,-0.1 35,-0.5 -0.274 82.6 -82.5-109.8-163.5 -14.8 -0.1 -10.0 14 14 A L S S- 0 0 74 -2,-0.1 35,-0.2 -3,-0.1 2,-0.2 -0.873 82.7 -55.5-111.7 97.9 -14.6 -2.4 -7.0 15 15 A T + 0 0 22 33,-2.0 -2,-0.2 -2,-0.7 33,-0.1 -0.518 67.9 145.5 74.6-137.1 -13.2 -5.7 -8.0 16 16 A T + 0 0 123 -2,-0.2 2,-0.3 -3,-0.0 -1,-0.1 0.324 69.0 73.9 82.8 -7.5 -15.0 -7.6 -10.8 17 17 A Q - 0 0 73 2,-0.1 2,-1.8 0, 0.0 -2,-0.1 -0.745 69.4-158.6-141.4 89.0 -11.6 -8.8 -11.9 18 18 A R - 0 0 173 -2,-0.3 38,-0.0 -3,-0.0 0, 0.0 -0.505 21.8-168.5 -70.3 87.0 -10.1 -11.6 -9.8 19 19 A L - 0 0 58 -2,-1.8 2,-0.2 1,-0.1 5,-0.1 -0.567 23.4-110.3 -80.9 142.9 -6.5 -11.1 -10.8 20 20 A P >> - 0 0 66 0, 0.0 3,-2.9 0, 0.0 4,-0.6 -0.510 16.7-127.4 -75.0 138.5 -4.0 -13.8 -9.7 21 21 A V G >4 S+ 0 0 23 1,-0.3 3,-1.2 2,-0.2 -2,-0.0 0.812 112.5 65.4 -51.9 -31.5 -1.4 -12.7 -7.1 22 22 A S G 34 S+ 0 0 90 1,-0.3 -1,-0.3 19,-0.0 -3,-0.0 0.775 104.2 44.4 -62.3 -26.7 1.1 -14.0 -9.7 23 23 A R G <4 S+ 0 0 157 -3,-2.9 19,-0.7 18,-0.1 20,-0.4 0.442 106.6 79.2 -95.2 -3.6 -0.1 -11.2 -11.9 24 24 A I E << -A 41 0A 2 -3,-1.2 17,-0.3 -4,-0.6 3,-0.1 -0.800 52.3-177.6-107.0 148.8 0.0 -8.8 -9.0 25 25 A K E - 0 0 55 15,-3.9 2,-0.2 1,-0.5 16,-0.2 0.790 63.1 -6.6-104.5 -77.5 3.1 -7.1 -7.5 26 26 A T E -A 40 0A 11 14,-0.7 14,-3.6 15,-0.1 -1,-0.5 -0.718 59.7-148.2-120.0 170.8 2.3 -5.0 -4.5 27 27 A Y E -A 39 0A 39 12,-0.3 2,-0.4 -2,-0.2 12,-0.3 -0.964 2.1-156.6-140.3 155.6 -0.9 -3.8 -2.8 28 28 A T E -A 38 0A 71 10,-3.5 10,-4.2 -2,-0.3 2,-0.5 -0.980 5.7-167.7-138.7 122.9 -2.1 -0.8 -0.8 29 29 A I E -A 37 0A 70 -2,-0.4 8,-0.2 8,-0.3 2,-0.2 -0.939 9.5-158.2-113.4 129.6 -5.0 -0.7 1.7 30 30 A T - 0 0 33 6,-1.8 -2,-0.0 -2,-0.5 0, 0.0 -0.590 16.3-162.7-101.7 165.0 -6.4 2.5 2.9 31 31 A E + 0 0 160 -2,-0.2 -1,-0.1 4,-0.1 -2,-0.0 0.541 65.6 88.3-118.5 -20.1 -8.4 3.3 6.1 32 32 A G S > S- 0 0 49 1,-0.1 3,-0.7 4,-0.1 -2,-0.1 0.120 112.5 -59.6 -67.7-171.7 -9.8 6.6 5.1 33 33 A S T 3 S+ 0 0 143 1,-0.3 -1,-0.1 2,-0.1 -3,-0.0 0.760 139.5 62.4 -42.3 -27.7 -13.1 7.1 3.3 34 34 A L T 3 + 0 0 88 2,-0.1 -1,-0.3 1,-0.1 3,-0.1 0.979 65.9 163.9 -63.5 -58.8 -11.4 5.1 0.6 35 35 A R < + 0 0 164 -3,-0.7 2,-0.3 1,-0.2 -4,-0.1 0.865 34.5 132.5 37.4 51.8 -11.0 2.0 2.8 36 36 A A - 0 0 5 14,-0.1 -6,-1.8 15,-0.1 2,-0.6 -0.914 61.7-116.0-130.0 156.3 -10.3 0.0 -0.3 37 37 A V E -AB 29 49A 1 12,-3.4 12,-1.6 -2,-0.3 2,-0.5 -0.840 26.3-157.1 -96.7 119.4 -7.6 -2.5 -1.3 38 38 A I E -AB 28 48A 13 -10,-4.2 -10,-3.5 -2,-0.6 2,-0.6 -0.858 4.6-162.6 -99.9 124.4 -5.4 -1.3 -4.1 39 39 A F E -AB 27 47A 7 8,-3.9 8,-2.3 -2,-0.5 2,-0.4 -0.933 1.9-162.2-111.8 117.9 -3.6 -4.0 -6.1 40 40 A I E -AB 26 46A 40 -14,-3.6 -15,-3.9 -2,-0.6 -14,-0.7 -0.839 8.5-152.1-100.8 133.1 -0.6 -3.1 -8.2 41 41 A T E > -A 24 0A 15 4,-1.7 3,-1.8 -2,-0.4 -17,-0.2 -0.555 31.4-108.5 -99.4 165.6 0.5 -5.4 -11.0 42 42 A K T 3 S+ 0 0 113 -19,-0.7 -18,-0.1 1,-0.3 -1,-0.1 0.604 121.3 62.5 -66.5 -10.5 4.0 -5.9 -12.5 43 43 A R T 3 S- 0 0 194 -20,-0.4 -1,-0.3 2,-0.2 3,-0.1 0.635 119.5-111.5 -87.5 -17.4 2.5 -4.1 -15.5 44 44 A G S < S+ 0 0 49 -3,-1.8 2,-0.6 1,-0.3 -2,-0.1 0.335 73.4 138.0 101.2 -3.3 1.9 -1.0 -13.4 45 45 A L - 0 0 78 -5,-0.0 -4,-1.7 2,-0.0 2,-0.4 -0.676 35.4-165.0 -80.1 117.3 -1.9 -1.4 -13.6 46 46 A K E -B 40 0A 77 -2,-0.6 2,-0.3 -6,-0.2 -6,-0.2 -0.880 8.6-179.7-107.3 135.4 -3.4 -0.6 -10.2 47 47 A V E -B 39 0A 16 -8,-2.3 -8,-3.9 -2,-0.4 2,-0.3 -0.921 19.1-132.2-131.9 156.8 -6.9 -1.6 -9.3 48 48 A a E +B 38 0A 9 -35,-0.5 -33,-2.0 -2,-0.3 2,-0.3 -0.762 23.2 179.6-108.2 155.0 -9.1 -1.2 -6.2 49 49 A A E -B 37 0A 2 -12,-1.6 -12,-3.4 -2,-0.3 -35,-0.1 -0.984 33.9 -99.0-152.3 155.1 -11.2 -3.9 -4.5 50 50 A D > - 0 0 64 -2,-0.3 3,-1.4 -14,-0.2 6,-0.2 -0.638 19.6-146.8 -80.4 130.4 -13.5 -4.2 -1.5 51 51 A P T 3 S+ 0 0 29 0, 0.0 -1,-0.1 0, 0.0 6,-0.1 0.407 90.6 83.4 -75.0 3.0 -11.8 -5.7 1.6 52 52 A Q T 3 S+ 0 0 164 4,-0.1 2,-0.4 5,-0.0 3,-0.1 0.554 71.9 92.6 -81.1 -9.3 -15.2 -7.3 2.3 53 53 A A <> - 0 0 19 -3,-1.4 4,-2.0 1,-0.1 5,-0.1 -0.748 65.6-154.8 -90.2 130.5 -14.3 -10.1 -0.1 54 54 A T H > S+ 0 0 112 -2,-0.4 4,-2.6 2,-0.2 5,-0.2 0.867 97.3 57.1 -69.3 -38.1 -12.7 -13.1 1.5 55 55 A W H > S+ 0 0 49 1,-0.2 4,-2.3 2,-0.2 -1,-0.2 0.863 108.4 48.9 -60.1 -36.3 -11.0 -14.0 -1.8 56 56 A V H > S+ 0 0 0 2,-0.2 4,-3.2 1,-0.2 -2,-0.2 0.934 110.4 48.6 -68.0 -48.1 -9.4 -10.6 -1.6 57 57 A R H X S+ 0 0 183 -4,-2.0 4,-1.6 1,-0.2 -2,-0.2 0.834 112.3 50.9 -60.3 -33.9 -8.3 -11.0 1.9 58 58 A D H X S+ 0 0 119 -4,-2.6 4,-1.4 2,-0.2 -1,-0.2 0.912 112.7 44.2 -69.6 -44.3 -6.9 -14.4 0.9 59 59 A V H X S+ 0 0 19 -4,-2.3 4,-3.7 1,-0.2 -2,-0.2 0.865 109.5 57.5 -67.2 -37.3 -5.0 -12.9 -2.0 60 60 A V H X S+ 0 0 22 -4,-3.2 4,-1.7 1,-0.2 -1,-0.2 0.885 101.9 56.1 -59.7 -40.3 -3.9 -10.0 0.2 61 61 A R H X S+ 0 0 198 -4,-1.6 4,-0.8 1,-0.2 -1,-0.2 0.911 114.1 38.6 -57.8 -45.6 -2.3 -12.5 2.6 62 62 A S H >X S+ 0 0 57 -4,-1.4 4,-2.6 1,-0.2 3,-1.3 0.924 105.9 65.8 -70.9 -46.9 -0.2 -13.9 -0.3 63 63 A M H 3X S+ 0 0 0 -4,-3.7 4,-2.7 1,-0.3 -1,-0.2 0.837 97.5 57.1 -42.1 -41.5 0.4 -10.5 -1.8 64 64 A D H 3< S+ 0 0 68 -4,-1.7 -1,-0.3 1,-0.2 -2,-0.2 0.905 110.3 42.8 -58.3 -43.7 2.4 -9.7 1.3 65 65 A R H X< S+ 0 0 206 -3,-1.3 3,-0.9 -4,-0.8 4,-0.4 0.829 112.2 54.2 -71.2 -33.5 4.6 -12.7 0.6 66 66 A K H 3< S+ 0 0 91 -4,-2.6 -2,-0.2 1,-0.3 -1,-0.2 0.856 126.8 22.6 -67.7 -36.1 4.7 -11.8 -3.1 67 67 A S T >X S+ 0 0 2 -4,-2.7 4,-1.0 -5,-0.3 3,-0.7 -0.212 88.8 118.4-123.6 39.7 5.9 -8.4 -2.1 68 68 A N T <4 S+ 0 0 91 -3,-0.9 4,-0.3 1,-0.3 2,-0.2 0.949 90.1 24.0 -69.4 -51.3 7.3 -9.2 1.3 69 69 A T T 34 S+ 0 0 118 -4,-0.4 -1,-0.3 -3,-0.1 -4,-0.1 -0.460 132.2 39.1-113.3 57.0 10.9 -8.2 0.4 70 70 A R T <4 S+ 0 0 172 -3,-0.7 -2,-0.1 -2,-0.2 -3,-0.1 0.236 88.2 81.5-164.3 -43.1 10.1 -5.8 -2.5 71 71 A N S < S- 0 0 49 -4,-1.0 -3,-0.1 -7,-0.2 -2,-0.1 0.920 124.8 -51.7 -40.3 -64.6 7.1 -3.7 -1.6 72 72 A N + 0 0 100 -4,-0.3 2,-1.8 -5,-0.3 -1,-0.2 -0.131 62.2 173.2 179.7 67.0 9.1 -1.4 0.5 73 73 A M + 0 0 101 2,-0.0 2,-0.3 -3,-0.0 -2,-0.0 -0.262 61.8 77.1 -80.4 50.1 11.3 -3.1 3.1 74 74 A I - 0 0 119 -2,-1.8 2,-0.1 2,-0.0 0, 0.0 -0.948 56.8-160.7-151.4 166.9 12.9 0.2 4.0 75 75 A Q - 0 0 181 -2,-0.3 -2,-0.0 2,-0.0 -3,-0.0 -0.611 23.1-137.0-158.0 88.9 12.2 3.4 5.9 76 76 A T - 0 0 130 -2,-0.1 -2,-0.0 1,-0.1 0, 0.0 0.114 22.4-117.5 -40.5 160.5 14.3 6.5 5.1 77 77 A K - 0 0 200 0, 0.0 -1,-0.1 0, 0.0 2,-0.0 -0.894 31.6-161.8-113.3 101.1 15.5 8.6 8.0 78 78 A P - 0 0 118 0, 0.0 2,-0.2 0, 0.0 0, 0.0 -0.218 21.1-104.7 -75.0 168.7 14.1 12.1 7.9 79 79 A T + 0 0 148 1,-0.1 2,-0.0 -2,-0.0 0, 0.0 -0.531 37.5 168.3 -93.3 161.7 15.5 15.0 9.9 80 80 A G - 0 0 72 1,-0.2 2,-0.2 -2,-0.2 -1,-0.1 0.127 31.2-101.9-132.9-111.3 14.1 16.6 13.0 81 81 A T - 0 0 125 -2,-0.0 2,-0.3 2,-0.0 -1,-0.2 -0.562 27.7-108.9-156.6-139.0 15.6 19.1 15.4 82 82 A Q - 0 0 175 -2,-0.2 2,-0.3 2,-0.0 0, 0.0 -0.970 15.5-156.6-166.1 169.9 17.3 19.3 18.8 83 83 A Q + 0 0 183 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.974 10.3 172.1-154.0 161.9 16.9 20.4 22.4 84 84 A S - 0 0 104 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.963 11.0-153.7-162.9 171.4 18.9 21.3 25.4 85 85 A T - 0 0 127 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.970 3.5-160.2-152.2 162.3 18.6 22.7 29.0 86 86 A N - 0 0 147 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.869 4.7-164.9-139.8 171.3 20.7 24.6 31.5 87 87 A T - 0 0 128 -2,-0.3 2,-0.2 2,-0.0 -2,-0.0 -0.879 8.6-158.8-148.8 178.0 20.7 25.2 35.3 88 88 A A + 0 0 101 -2,-0.3 2,-0.3 2,-0.0 -2,-0.0 -0.685 27.5 139.6-170.0 109.5 22.2 27.5 37.9 89 89 A V - 0 0 135 -2,-0.2 2,-0.3 3,-0.0 3,-0.1 -0.858 19.8-174.6-159.6 118.8 22.5 26.7 41.6 90 90 A T - 0 0 120 -2,-0.3 -2,-0.0 1,-0.2 0, 0.0 -0.880 40.7 -82.3-117.7 149.2 25.4 27.5 44.0 91 91 A L - 0 0 154 -2,-0.3 2,-0.4 1,-0.1 -1,-0.2 0.054 52.1-108.1 -41.1 155.4 26.0 26.5 47.6 92 92 A T 0 0 137 1,-0.1 -1,-0.1 -3,-0.1 -3,-0.0 -0.790 360.0 360.0 -97.0 134.7 24.2 28.7 50.1 93 93 A G 0 0 123 -2,-0.4 -1,-0.1 0, 0.0 -2,-0.0 -0.453 360.0 360.0 131.5 360.0 26.2 31.1 52.2