==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=5-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER ANTIVIRAL PROTEIN 15-JUN-01 1JE4 . COMPND 2 MOLECULE: MACROPHAGE INFLAMMATORY PROTEIN 1-BETA; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR S.KIM,S.JAO,J.S.LAURENCE,P.J.LIWANG . 69 1 2 2 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5964.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 25 36.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 10 14.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 9 13.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A A 0 0 133 0, 0.0 4,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 166.1 -7.0 30.3 -3.9 2 2 A P + 0 0 131 0, 0.0 2,-0.2 0, 0.0 0, 0.0 0.965 360.0 66.5 -52.7 -62.3 -9.2 27.6 -2.2 3 3 A M S S- 0 0 159 1,-0.1 0, 0.0 2,-0.1 0, 0.0 -0.432 90.5-122.6 -66.1 131.2 -7.2 24.6 -3.4 4 4 A G - 0 0 51 -2,-0.2 -1,-0.1 1,-0.1 0, 0.0 0.206 33.4 -88.2 -59.6-170.7 -3.7 24.5 -1.8 5 5 A S S S- 0 0 115 1,-0.2 -1,-0.1 -4,-0.0 -2,-0.1 0.962 112.4 -11.8 -68.2 -53.4 -0.5 24.4 -3.7 6 6 A D S S+ 0 0 147 2,-0.0 -1,-0.2 0, 0.0 -3,-0.0 -0.335 76.4 177.1-147.6 58.2 -0.3 20.7 -4.1 7 7 A P - 0 0 78 0, 0.0 2,-0.0 0, 0.0 -4,-0.0 -0.543 23.2-142.3 -70.2 110.4 -2.9 19.0 -1.8 8 8 A P - 0 0 113 0, 0.0 -2,-0.0 0, 0.0 0, 0.0 -0.306 11.7-159.1 -71.7 156.7 -2.7 15.2 -2.4 9 9 A T S S- 0 0 80 -2,-0.0 0, 0.0 0, 0.0 0, 0.0 0.849 75.6 -37.5-100.5 -54.3 -5.8 13.0 -2.4 10 10 A A S S+ 0 0 37 2,-0.0 2,-0.1 0, 0.0 0, 0.0 0.074 99.0 120.4-165.6 32.3 -4.5 9.5 -1.7 11 11 A a - 0 0 33 20,-0.2 2,-0.3 27,-0.1 22,-0.0 -0.133 52.5-121.1 -91.2-169.6 -1.2 9.2 -3.5 12 12 A b - 0 0 31 25,-0.3 3,-0.1 1,-0.1 -2,-0.0 -0.991 12.0-162.0-139.6 146.5 2.3 8.4 -2.3 13 13 A A S S+ 0 0 101 -2,-0.3 2,-0.3 1,-0.3 -1,-0.1 0.758 83.1 13.7 -95.0 -31.3 5.7 10.2 -2.4 14 14 A S - 0 0 93 38,-0.0 -1,-0.3 0, 0.0 37,-0.3 -0.997 67.2-146.0-147.1 147.3 7.8 7.2 -1.6 15 15 A Y - 0 0 81 -2,-0.3 2,-0.5 -3,-0.1 37,-0.2 -0.253 36.2 -81.5 -99.7-170.4 7.4 3.4 -1.5 16 16 A T - 0 0 39 35,-2.0 37,-0.2 2,-0.1 -1,-0.1 -0.850 23.9-161.4-101.2 128.0 8.9 0.7 0.7 17 17 A A S S+ 0 0 107 -2,-0.5 2,-0.3 35,-0.1 -1,-0.1 -0.148 71.3 58.5 -97.1 37.9 12.4 -0.6 -0.1 18 18 A R S S- 0 0 208 2,-0.0 2,-0.4 0, 0.0 -2,-0.1 -0.869 85.2 -92.8-150.0-178.4 11.9 -3.8 2.0 19 19 A K - 0 0 145 -2,-0.3 -2,-0.1 2,-0.0 0, 0.0 -0.847 26.4-172.4-108.6 143.2 9.7 -6.8 2.4 20 20 A L - 0 0 54 -2,-0.4 30,-0.0 30,-0.0 -2,-0.0 -0.862 22.6-131.9-137.8 101.4 6.7 -7.1 4.7 21 21 A P > - 0 0 57 0, 0.0 3,-1.4 0, 0.0 -2,-0.0 -0.098 20.1-121.6 -49.5 145.4 5.0 -10.6 5.1 22 22 A R G > S+ 0 0 135 1,-0.3 3,-1.6 2,-0.2 40,-0.0 0.840 112.8 63.7 -58.9 -34.2 1.2 -10.6 4.8 23 23 A N G 3 S+ 0 0 135 1,-0.3 -1,-0.3 0, 0.0 -3,-0.0 0.778 99.1 54.9 -61.5 -26.5 1.0 -12.0 8.3 24 24 A F G < S+ 0 0 110 -3,-1.4 21,-0.6 20,-0.0 2,-0.4 -0.041 99.0 82.9 -97.3 30.7 2.5 -8.8 9.5 25 25 A V E < -A 44 0A 18 -3,-1.6 19,-0.2 19,-0.2 3,-0.1 -0.995 52.7-168.4-137.4 142.2 -0.2 -6.7 7.8 26 26 A V E - 0 0 74 17,-1.9 2,-0.3 -2,-0.4 -1,-0.1 0.927 67.4 -28.5 -90.0 -64.3 -3.7 -5.7 8.8 27 27 A D E -A 43 0A 96 16,-1.0 16,-1.0 2,-0.0 -1,-0.3 -0.848 56.3-121.5-145.2-179.9 -5.3 -4.2 5.7 28 28 A Y E -A 42 0A 90 14,-0.3 2,-0.3 -2,-0.3 14,-0.3 -0.704 14.4-153.9-123.1 175.3 -4.5 -2.4 2.4 29 29 A Y E -A 41 0A 145 12,-1.8 12,-3.3 -2,-0.2 2,-0.2 -0.989 6.9-141.7-153.7 143.4 -5.4 0.9 0.7 30 30 A E E -A 40 0A 108 -2,-0.3 2,-0.2 10,-0.2 10,-0.1 -0.668 22.8-114.7-104.5 160.6 -5.6 2.2 -2.9 31 31 A T - 0 0 25 8,-0.5 -20,-0.2 -2,-0.2 -1,-0.0 -0.540 34.5 -98.9 -91.9 159.5 -4.7 5.6 -4.2 32 32 A S - 0 0 46 -2,-0.2 -1,-0.2 1,-0.1 3,-0.0 0.203 32.8-108.6 -60.3-170.1 -7.1 8.2 -5.7 33 33 A S S S+ 0 0 118 1,-0.1 -1,-0.1 5,-0.1 -2,-0.0 -0.072 100.6 79.9-116.2 31.0 -7.6 8.6 -9.5 34 34 A L S S+ 0 0 132 3,-0.1 2,-0.2 0, 0.0 -1,-0.1 0.709 75.9 77.6-105.4 -31.3 -5.9 12.0 -9.8 35 35 A a S S- 0 0 51 1,-0.1 -4,-0.0 2,-0.1 0, 0.0 -0.554 73.1-139.2 -82.9 146.2 -2.3 10.9 -9.8 36 36 A S S S+ 0 0 128 -2,-0.2 -1,-0.1 1,-0.2 -3,-0.0 0.072 91.1 64.1 -90.6 24.2 -0.7 9.4 -12.9 37 37 A Q S S- 0 0 82 2,-0.0 -25,-0.3 -25,-0.0 -1,-0.2 -0.640 77.0-150.0-149.9 86.2 1.1 6.8 -10.8 38 38 A P - 0 0 90 0, 0.0 2,-0.3 0, 0.0 -5,-0.1 -0.039 15.4-169.6 -52.3 157.5 -1.0 4.2 -8.9 39 39 A A - 0 0 3 14,-0.1 2,-0.7 15,-0.1 -8,-0.5 -0.944 19.7-136.4-157.3 132.2 0.3 2.8 -5.7 40 40 A V E -AB 30 52A 22 12,-1.7 12,-1.6 -2,-0.3 -10,-0.2 -0.807 24.1-156.6 -94.1 116.3 -0.8 -0.1 -3.4 41 41 A V E -AB 29 51A 8 -12,-3.3 -12,-1.8 -2,-0.7 2,-0.3 -0.552 6.7-162.3 -90.0 155.8 -0.7 0.8 0.3 42 42 A F E -A 28 0A 18 8,-0.9 2,-0.3 -14,-0.3 -14,-0.3 -0.792 11.3-146.7-142.8 96.1 -0.4 -1.7 3.2 43 43 A Q E -A 27 0A 97 -16,-1.0 -17,-1.9 -2,-0.3 -16,-1.0 -0.452 20.5-147.3 -64.8 122.5 -1.4 -0.6 6.7 44 44 A T E -A 25 0A 17 4,-1.3 -19,-0.2 3,-0.3 -1,-0.1 -0.496 17.2-117.8 -89.9 161.1 0.9 -2.3 9.2 45 45 A K S S+ 0 0 130 -21,-0.6 -1,-0.1 -2,-0.2 -20,-0.1 0.990 109.5 4.8 -59.6 -65.4 -0.1 -3.4 12.7 46 46 A R S S+ 0 0 221 2,-0.1 -1,-0.1 -3,-0.0 2,-0.1 0.811 127.9 67.9 -90.0 -35.7 2.4 -1.3 14.6 47 47 A S S S- 0 0 81 1,-0.1 -3,-0.3 -4,-0.0 3,-0.1 -0.354 85.5-111.6 -82.1 165.1 3.8 0.6 11.6 48 48 A K - 0 0 182 1,-0.2 -4,-1.3 -5,-0.1 -1,-0.1 0.062 61.9 -37.9 -80.6-164.8 1.9 3.1 9.5 49 49 A Q - 0 0 106 -6,-0.2 2,-0.5 1,-0.1 -6,-0.2 -0.192 55.7-148.0 -57.2 148.5 0.8 2.8 5.9 50 50 A V - 0 0 19 -3,-0.1 -8,-0.9 -34,-0.0 2,-0.3 -0.935 6.1-154.8-127.5 109.2 3.2 1.0 3.5 51 51 A b E -B 41 0A 12 -2,-0.5 -35,-2.0 -37,-0.3 2,-0.4 -0.599 14.3-176.9 -83.2 140.6 3.3 2.0 -0.1 52 52 A A E -B 40 0A 3 -12,-1.6 -12,-1.7 -2,-0.3 -35,-0.1 -0.998 36.2-103.1-141.8 135.5 4.5 -0.6 -2.7 53 53 A D > - 0 0 52 -2,-0.4 3,-1.7 -37,-0.2 6,-0.3 -0.380 25.8-153.2 -57.8 109.1 5.1 -0.3 -6.5 54 54 A P T 3 S+ 0 0 47 0, 0.0 6,-0.2 0, 0.0 -1,-0.2 0.738 89.8 73.9 -56.8 -22.7 2.0 -2.0 -8.0 55 55 A S T 3 S+ 0 0 121 4,-0.1 -2,-0.1 5,-0.0 -16,-0.0 0.862 81.3 86.8 -59.9 -36.8 4.2 -2.9 -11.0 56 56 A E S <> S- 0 0 85 -3,-1.7 4,-0.6 1,-0.1 -4,-0.0 -0.088 78.1-134.9 -60.3 164.1 6.0 -5.5 -8.9 57 57 A S H > S+ 0 0 87 2,-0.2 4,-1.9 1,-0.1 3,-0.4 0.844 97.5 67.4 -90.3 -40.7 4.6 -9.0 -8.8 58 58 A W H > S+ 0 0 50 1,-0.2 4,-1.9 2,-0.2 5,-0.2 0.785 96.6 61.2 -51.0 -28.4 4.9 -9.7 -5.0 59 59 A V H > S+ 0 0 4 -6,-0.3 4,-2.1 1,-0.2 -1,-0.2 0.971 104.7 43.1 -64.1 -55.8 2.2 -7.0 -4.6 60 60 A Q H X S+ 0 0 136 -4,-0.6 4,-1.5 -3,-0.4 -1,-0.2 0.815 109.5 62.1 -60.2 -30.8 -0.5 -8.8 -6.5 61 61 A E H X S+ 0 0 111 -4,-1.9 4,-2.3 2,-0.2 3,-0.5 0.958 107.6 39.8 -60.2 -53.8 0.6 -12.0 -4.7 62 62 A Y H X S+ 0 0 35 -4,-1.9 4,-2.4 1,-0.2 -1,-0.2 0.875 110.8 59.6 -64.1 -38.2 -0.3 -10.7 -1.3 63 63 A V H X S+ 0 0 34 -4,-2.1 4,-0.6 1,-0.2 -1,-0.2 0.817 112.3 40.0 -60.2 -31.0 -3.4 -9.0 -2.6 64 64 A Y H X S+ 0 0 136 -4,-1.5 4,-1.4 -3,-0.5 3,-0.2 0.832 111.7 55.1 -86.2 -36.8 -4.6 -12.4 -3.7 65 65 A D H < S+ 0 0 56 -4,-2.3 -2,-0.2 1,-0.2 -3,-0.2 0.836 100.6 61.6 -65.1 -33.2 -3.4 -14.3 -0.6 66 66 A L H < S+ 0 0 61 -4,-2.4 -1,-0.2 1,-0.2 -2,-0.2 0.894 106.0 45.2 -60.3 -41.5 -5.4 -11.9 1.6 67 67 A E H < S+ 0 0 124 -4,-0.6 -1,-0.2 -3,-0.2 -2,-0.2 0.819 103.3 79.9 -71.9 -31.5 -8.7 -13.0 -0.1 68 68 A L < 0 0 96 -4,-1.4 0, 0.0 0, 0.0 0, 0.0 -0.521 360.0 360.0 -79.2 144.2 -7.6 -16.7 0.2 69 69 A N 0 0 234 -2,-0.2 -3,-0.0 0, 0.0 -4,-0.0 -0.771 360.0 360.0-156.6 360.0 -8.0 -18.5 3.5