==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER IMMUNE SYSTEM 29-JUN-07 2JRW . COMPND 2 MOLECULE: CYCLIC EXTENDED PEP.1; . SOURCE 2 SYNTHETIC: YES; . AUTHOR H.H.JUNG,H.J.YI,S.K.LEE,J.Y.LEE,H.J.JUNG,S.T.YANG,Y.-J.EU, . 23 1 1 1 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 2742.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 2 8.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 1 4.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A a 0 0 117 0, 0.0 2,-0.3 0, 0.0 22,-0.0 0.000 360.0 360.0 360.0 159.6 7.0 11.2 -8.3 2 2 A A + 0 0 81 1,-0.2 3,-0.1 3,-0.0 21,-0.0 -0.776 360.0 3.7-102.1 146.5 9.3 11.9 -5.4 3 3 A E S S- 0 0 167 -2,-0.3 2,-0.3 1,-0.1 -1,-0.2 0.925 83.5-135.1 44.7 86.6 12.2 9.6 -4.4 4 4 A P + 0 0 119 0, 0.0 -1,-0.1 0, 0.0 19,-0.0 -0.534 56.7 123.0 -72.7 128.4 11.9 6.9 -7.1 5 5 A M + 0 0 156 -2,-0.3 2,-0.4 -3,-0.1 -2,-0.0 0.056 26.6 132.0 179.0 53.3 12.2 3.4 -5.6 6 6 A T + 0 0 67 17,-0.1 5,-0.1 13,-0.0 0, 0.0 -0.888 23.9 172.7-117.8 147.6 9.2 1.1 -6.4 7 7 A L - 0 0 120 3,-0.7 3,-0.5 -2,-0.4 5,-0.2 -0.973 35.2 -88.4-148.8 164.2 9.3 -2.4 -7.7 8 8 A P S S+ 0 0 84 0, 0.0 -1,-0.0 0, 0.0 0, 0.0 -0.129 109.5 26.5 -66.4 165.6 7.1 -5.4 -8.5 9 9 A E S S+ 0 0 184 3,-0.2 4,-0.1 1,-0.1 0, 0.0 0.902 127.9 52.2 44.3 42.0 6.4 -8.0 -5.8 10 10 A N S S+ 0 0 148 -3,-0.5 -3,-0.7 2,-0.1 -1,-0.1 0.229 110.0 34.1 165.9 44.1 6.9 -5.1 -3.4 11 11 A Y S S+ 0 0 96 -5,-0.1 2,-0.4 1,-0.1 7,-0.1 0.264 105.6 56.4 179.5 -21.0 4.8 -2.1 -4.3 12 12 A F + 0 0 139 -5,-0.2 -3,-0.2 5,-0.1 2,-0.2 -0.931 63.1 131.2-133.0 113.1 1.4 -3.4 -5.8 13 13 A S - 0 0 92 -2,-0.4 4,-0.1 2,-0.2 0, 0.0 -0.653 64.3 -94.5-139.6-162.2 -0.9 -5.7 -3.8 14 14 A E S S+ 0 0 187 -2,-0.2 -2,-0.0 2,-0.1 0, 0.0 -0.143 91.8 83.6-115.6 38.7 -4.5 -6.1 -2.8 15 15 A R S S- 0 0 203 1,-0.0 2,-0.9 0, 0.0 -2,-0.2 -0.618 100.3 -50.3-125.6-173.8 -4.2 -4.5 0.6 16 16 A P S S- 0 0 90 0, 0.0 -2,-0.1 0, 0.0 -1,-0.0 -0.463 70.0-111.1 -65.1 103.4 -4.3 -0.9 2.0 17 17 A Y - 0 0 107 -2,-0.9 -5,-0.1 1,-0.2 -3,-0.0 -0.052 37.0-174.4 -37.3 111.6 -1.8 0.8 -0.3 18 18 A H + 0 0 184 2,-0.1 -1,-0.2 -7,-0.1 -7,-0.0 0.925 64.0 58.2 -79.8 -45.9 1.2 1.6 2.0 19 19 A P S S- 0 0 44 0, 0.0 -8,-0.0 0, 0.0 -13,-0.0 -0.187 109.0 -68.4 -77.6 174.2 3.3 3.6 -0.5 20 20 A P - 0 0 71 0, 0.0 3,-0.2 0, 0.0 -2,-0.1 -0.461 36.0-152.5 -67.9 130.5 2.1 6.7 -2.3 21 21 A P S S+ 0 0 97 0, 0.0 -3,-0.0 0, 0.0 -4,-0.0 0.764 91.1 60.6 -75.2 -28.0 -0.6 6.1 -4.9 22 22 A P 0 0 116 0, 0.0 0, 0.0 0, 0.0 0, 0.0 0.786 360.0 360.0 -72.3 -25.1 0.3 9.0 -7.1 23 23 A a 0 0 73 -3,-0.2 -17,-0.1 -21,-0.0 0, 0.0 0.267 360.0 360.0 -78.5 360.0 3.7 7.6 -7.8