==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=15-JAN-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS 07-AUG-07 2JTV . COMPND 2 MOLECULE: PROTEIN OF UNKNOWN FUNCTION; . SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; . AUTHOR A.IGNATCHENKO,A.GUTMANAS,A.LEMAK,A.YEE,M.KARRA,S.SRISAILAM, . 65 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4759.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 47 72.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 11 16.9 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 5 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 3 4.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 24 36.9 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 3.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 215 0, 0.0 2,-0.1 0, 0.0 36,-0.0 0.000 360.0 360.0 360.0 -35.5 -10.2 7.1 5.3 2 2 A A - 0 0 20 1,-0.1 2,-0.1 35,-0.0 32,-0.0 -0.430 360.0-130.2 -78.7 154.5 -9.3 4.0 3.2 3 3 A T >> - 0 0 80 -2,-0.1 4,-1.5 1,-0.1 3,-1.0 -0.447 30.1 -97.6 -98.0 173.8 -12.0 1.5 2.2 4 4 A A H 3> S+ 0 0 62 1,-0.3 4,-1.7 2,-0.2 5,-0.1 0.823 125.2 60.8 -60.2 -30.9 -11.9 -2.3 2.5 5 5 A D H 3> S+ 0 0 104 1,-0.2 4,-0.9 2,-0.2 -1,-0.3 0.825 103.0 50.9 -65.2 -30.3 -10.9 -2.4 -1.1 6 6 A D H <> S+ 0 0 22 -3,-1.0 4,-3.1 2,-0.2 -1,-0.2 0.841 104.2 56.8 -76.0 -34.8 -7.8 -0.4 -0.1 7 7 A F H X S+ 0 0 65 -4,-1.5 4,-2.1 1,-0.2 -2,-0.2 0.882 105.2 52.2 -60.2 -38.5 -7.1 -3.0 2.7 8 8 A K H X S+ 0 0 116 -4,-1.7 4,-0.9 2,-0.2 -1,-0.2 0.823 112.3 46.7 -65.0 -31.4 -7.0 -5.6 -0.1 9 9 A L H X S+ 0 0 28 -4,-0.9 4,-1.2 2,-0.2 -2,-0.2 0.924 111.6 47.7 -77.3 -46.4 -4.5 -3.5 -1.9 10 10 A I H X S+ 0 0 0 -4,-3.1 4,-0.8 1,-0.2 -2,-0.2 0.839 111.0 51.7 -67.9 -32.1 -2.2 -2.7 1.0 11 11 A R H X S+ 0 0 146 -4,-2.1 4,-2.0 -5,-0.2 3,-0.4 0.854 103.1 60.4 -70.8 -31.7 -2.2 -6.4 2.0 12 12 A D H X S+ 0 0 54 -4,-0.9 4,-1.2 1,-0.2 -2,-0.2 0.854 95.6 61.7 -61.8 -36.1 -1.2 -7.2 -1.6 13 13 A I H <>S+ 0 0 0 -4,-1.2 5,-2.3 1,-0.2 -1,-0.2 0.891 107.6 43.9 -56.8 -39.8 1.9 -5.1 -1.1 14 14 A H H ><5S+ 0 0 49 -4,-0.8 3,-1.9 -3,-0.4 -2,-0.2 0.886 109.1 55.8 -73.3 -39.6 3.0 -7.5 1.6 15 15 A S H 3<5S+ 0 0 100 -4,-2.0 -1,-0.2 1,-0.3 -2,-0.2 0.678 103.7 56.8 -67.2 -17.5 2.0 -10.6 -0.4 16 16 A T T 3<5S- 0 0 71 -4,-1.2 -1,-0.3 -3,-0.2 3,-0.3 0.322 135.9 -85.7 -95.7 6.2 4.3 -9.3 -3.1 17 17 A G T < 5S- 0 0 75 -3,-1.9 -3,-0.2 1,-0.2 -2,-0.1 0.178 73.0 -65.9 114.9 -16.8 7.2 -9.2 -0.7 18 18 A G S + 0 0 12 25,-0.1 4,-1.0 26,-0.0 3,-0.4 -0.944 69.0 103.5 164.4-141.5 1.3 4.4 -13.3 25 25 A S H >> S- 0 0 91 -2,-0.3 3,-1.1 1,-0.2 4,-0.8 -0.048 99.7 -36.2 61.6-163.8 -2.1 5.5 -14.6 26 26 A R H 34 S+ 0 0 209 1,-0.3 3,-0.4 2,-0.2 -1,-0.2 0.771 135.2 67.0 -63.7 -26.1 -5.3 5.1 -12.5 27 27 A E H 34 S+ 0 0 111 -3,-0.4 4,-0.4 1,-0.2 -1,-0.3 0.844 100.0 49.0 -62.0 -34.2 -4.0 1.9 -11.1 28 28 A Q H S+ 0 0 36 0, 0.0 4,-1.6 0, 0.0 -1,-0.2 0.797 111.5 56.0 -61.9 -25.4 -4.8 4.3 -4.8 31 31 A F H > S+ 0 0 19 -3,-0.5 4,-1.1 -4,-0.4 -2,-0.2 0.942 111.6 39.2 -71.2 -48.5 -1.1 3.4 -4.2 32 32 A E H X S+ 0 0 54 -4,-2.3 4,-2.0 2,-0.2 -1,-0.2 0.790 111.8 59.4 -72.5 -26.9 0.1 7.0 -3.9 33 33 A D H X S+ 0 0 75 -4,-2.4 4,-1.9 -5,-0.3 -1,-0.2 0.885 103.5 51.0 -65.8 -37.7 -3.1 7.8 -2.0 34 34 A L H X>S+ 0 0 0 -4,-1.6 5,-3.3 2,-0.2 6,-1.2 0.806 105.8 56.5 -66.7 -29.5 -2.0 5.2 0.5 35 35 A V H <5S+ 0 0 42 -4,-1.1 3,-0.3 4,-0.2 -2,-0.2 0.915 106.4 49.0 -63.6 -42.8 1.3 7.1 0.6 36 36 A D H <5S+ 0 0 129 -4,-2.0 -2,-0.2 1,-0.2 -1,-0.2 0.869 111.6 49.1 -63.2 -37.4 -0.7 10.2 1.5 37 37 A L H <5S- 0 0 20 -4,-1.9 -1,-0.2 -5,-0.1 -2,-0.2 0.683 119.5-114.8 -75.4 -19.7 -2.5 8.1 4.2 38 38 A G T <5S+ 0 0 20 -4,-1.0 19,-0.5 -3,-0.3 20,-0.5 0.614 89.8 107.7 96.0 14.9 1.0 6.9 5.4 39 39 A W S - 0 0 35 -16,-1.9 4,-1.3 -2,-0.0 -16,-0.1 -0.376 38.8 -93.6-101.8-169.6 5.3 1.4 6.2 56 56 A E H > S+ 0 0 175 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.868 130.7 49.7 -75.3 -35.6 4.5 0.6 9.8 57 57 A R H > S+ 0 0 155 -19,-0.5 4,-2.6 2,-0.2 -18,-0.2 0.917 109.8 51.4 -63.5 -43.2 0.9 1.8 9.1 58 58 A G H > S+ 0 0 0 -20,-0.5 4,-0.9 -19,-0.3 -1,-0.2 0.808 110.8 48.6 -63.5 -31.0 0.9 -0.3 6.0 59 59 A T H X S+ 0 0 72 -4,-1.3 4,-1.9 2,-0.2 -2,-0.2 0.895 111.5 48.4 -73.2 -41.6 2.0 -3.2 8.2 60 60 A S H X S+ 0 0 79 -4,-2.6 4,-1.3 1,-0.2 -2,-0.2 0.854 108.2 55.5 -65.9 -35.2 -0.7 -2.5 10.8 61 61 A A H < S+ 0 0 8 -4,-2.6 -1,-0.2 1,-0.2 -2,-0.2 0.811 108.1 48.8 -66.8 -30.9 -3.3 -2.2 8.0 62 62 A A H < S+ 0 0 31 -4,-0.9 -2,-0.2 1,-0.2 -1,-0.2 0.853 109.4 50.9 -75.4 -36.5 -2.3 -5.7 6.9 63 63 A L H < S+ 0 0 145 -4,-1.9 2,-0.4 2,-0.1 -2,-0.2 0.727 91.7 97.2 -71.7 -22.0 -2.6 -7.0 10.5 64 64 A R < 0 0 173 -4,-1.3 -3,-0.0 -5,-0.2 -4,-0.0 -0.560 360.0 360.0 -69.4 121.3 -6.0 -5.4 10.5 65 65 A S 0 0 156 -2,-0.4 -1,-0.1 0, 0.0 -2,-0.1 0.084 360.0 360.0-149.6 360.0 -8.6 -8.1 9.7