==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=4-MAR-2012 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 30-JUN-08 2K5N . COMPND 2 MOLECULE: PUTATIVE COLD-SHOCK PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: PECTOBACTERIUM ATROSEPTICUM; . AUTHOR J.L.MILLS,A.ELETSKY,Q.ZHANG,D.LEE,M.JIANG,C.CICCOSANTI,R.XIA . 74 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5498.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 46 62.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 5.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 27 36.5 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 7 9.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 5 6.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 1 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 182 0, 0.0 48,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0-165.9 -13.9 -4.6 -3.6 2 2 A A - 0 0 46 46,-0.1 2,-0.3 1,-0.1 47,-0.2 0.823 360.0-156.7 68.9 113.5 -11.3 -2.5 -1.6 3 3 A M E -A 48 0A 50 45,-1.9 45,-1.6 18,-0.0 2,-0.5 -0.816 15.8-119.8-115.9 158.0 -9.5 -4.3 1.2 4 4 A N E +A 47 0A 101 -2,-0.3 18,-0.9 43,-0.2 2,-0.3 -0.859 39.2 174.7 -98.0 130.1 -7.8 -3.0 4.3 5 5 A G E -AB 46 21A 2 41,-2.9 41,-2.9 -2,-0.5 2,-0.4 -0.886 27.8-123.6-133.9 162.9 -4.1 -3.7 4.6 6 6 A T E -AB 45 20A 59 14,-3.3 14,-2.0 -2,-0.3 2,-0.7 -0.891 27.5-119.7-110.1 138.7 -1.1 -3.0 6.8 7 7 A I E + B 0 19A 0 37,-2.3 36,-3.0 -2,-0.4 37,-0.2 -0.654 48.2 149.6 -79.5 114.8 2.1 -1.5 5.5 8 8 A T E + 0 0 73 10,-1.3 2,-0.5 -2,-0.7 -1,-0.2 0.793 63.2 36.1-113.1 -55.4 4.9 -3.9 6.1 9 9 A T E S+ B 0 18A 57 9,-2.1 9,-2.6 2,-0.0 -1,-0.4 -0.922 73.6 149.4-104.5 124.5 7.5 -3.5 3.4 10 10 A W E - B 0 17A 43 -2,-0.5 2,-0.6 7,-0.3 7,-0.3 -0.908 32.3-165.3-160.1 126.8 8.0 0.1 2.2 11 11 A F E >> - B 0 16A 114 5,-3.2 4,-3.3 -2,-0.3 5,-1.3 -0.917 10.0-179.5-112.0 102.1 10.9 2.2 0.8 12 12 A K T 45S+ 0 0 110 -2,-0.6 -1,-0.1 1,-0.2 5,-0.0 0.804 78.6 62.6 -73.8 -30.4 9.8 5.8 1.1 13 13 A D T 45S+ 0 0 140 1,-0.1 -1,-0.2 3,-0.1 -2,-0.0 0.903 120.8 23.4 -60.3 -42.1 13.0 7.1 -0.5 14 14 A K T 45S- 0 0 139 2,-0.2 -2,-0.2 -3,-0.1 -1,-0.1 0.902 107.4-121.1 -90.4 -51.6 12.2 5.3 -3.7 15 15 A G T <5 + 0 0 3 -4,-3.3 16,-3.6 1,-0.4 17,-0.3 0.747 69.3 93.9 112.8 37.4 8.5 5.0 -3.5 16 16 A F E < +BC 11 30A 69 -5,-1.3 -5,-3.2 14,-0.3 -1,-0.4 -0.962 32.0 124.2-148.8 167.1 7.6 1.3 -3.5 17 17 A G E -BC 10 29A 0 12,-1.8 12,-2.7 -2,-0.3 2,-0.4 -0.973 50.1 -75.8 171.5-160.3 6.9 -1.6 -1.3 18 18 A F E -BC 9 28A 80 -9,-2.6 -9,-2.1 -2,-0.3 -10,-1.3 -0.995 28.7-166.6-137.9 127.9 4.4 -4.4 -0.3 19 19 A I E -BC 7 27A 0 8,-1.3 8,-1.9 -2,-0.4 2,-0.5 -0.952 9.7-153.9-117.4 132.5 1.3 -4.0 1.7 20 20 A K E -BC 6 26A 82 -14,-2.0 -14,-3.3 -2,-0.4 6,-0.2 -0.904 5.2-161.6-111.7 130.2 -0.6 -7.0 3.1 21 21 A D E -B 5 0A 5 4,-1.2 -16,-0.2 -2,-0.5 26,-0.0 -0.230 30.3-113.0 -91.9-170.7 -4.3 -7.2 3.8 22 22 A E S S+ 0 0 173 -18,-0.9 -17,-0.1 -2,-0.1 -1,-0.0 0.519 109.6 49.0-103.5 -9.0 -6.0 -9.7 6.1 23 23 A N S S+ 0 0 136 -19,-0.2 -1,-0.1 2,-0.1 -18,-0.1 0.849 125.4 3.7 -97.2 -44.8 -8.0 -11.5 3.3 24 24 A G S S- 0 0 37 1,-0.2 2,-0.2 3,-0.0 -4,-0.1 0.630 88.8 -96.6-108.2-100.2 -5.3 -12.2 0.7 25 25 A D - 0 0 92 -6,-0.1 -4,-1.2 0, 0.0 2,-0.3 -0.786 58.2 -29.9-166.8-160.9 -1.5 -11.5 1.0 26 26 A N E -C 20 0A 58 -6,-0.2 31,-0.3 -2,-0.2 2,-0.3 -0.592 54.0-165.6 -79.5 135.9 1.2 -9.0 0.0 27 27 A R E -C 19 0A 16 -8,-1.9 -8,-1.3 -2,-0.3 2,-0.6 -0.864 28.7-102.0-117.8 156.7 0.6 -6.9 -3.1 28 28 A Y E -Cd 18 58A 59 29,-3.2 31,-0.9 -2,-0.3 2,-0.3 -0.683 44.9-174.1 -79.9 117.5 3.1 -4.8 -5.1 29 29 A F E -C 17 0A 3 -12,-2.7 -12,-1.8 -2,-0.6 2,-0.3 -0.809 11.1-170.8-113.2 156.1 2.6 -1.2 -4.3 30 30 A H E > -C 16 0A 70 -2,-0.3 3,-2.2 -14,-0.2 -14,-0.3 -0.989 33.2-120.1-148.9 138.2 4.1 2.0 -5.8 31 31 A V G > S+ 0 0 50 -16,-3.6 3,-1.8 -2,-0.3 -15,-0.1 0.740 106.5 69.2 -49.2 -30.9 3.9 5.6 -4.6 32 32 A I G 3 S+ 0 0 127 -17,-0.3 -1,-0.3 1,-0.3 -16,-0.1 0.813 97.4 51.1 -61.9 -30.0 2.3 6.7 -7.9 33 33 A K G < S+ 0 0 104 -3,-2.2 29,-2.8 26,-0.1 2,-0.5 0.280 92.9 94.4 -93.7 10.3 -0.9 4.8 -7.2 34 34 A V B < -f 62 0B 15 -3,-1.8 29,-0.2 27,-0.2 14,-0.0 -0.888 56.2-162.4-108.7 133.0 -1.3 6.4 -3.7 35 35 A A S S+ 0 0 92 27,-2.4 28,-0.2 -2,-0.5 -1,-0.1 0.723 95.9 28.2 -82.9 -23.9 -3.4 9.5 -3.2 36 36 A N S > S+ 0 0 37 26,-0.6 3,-0.9 1,-0.1 -1,-0.3 -0.578 73.0 157.4-135.8 71.5 -1.8 10.3 0.2 37 37 A P G > + 0 0 44 0, 0.0 3,-0.9 0, 0.0 -1,-0.1 0.694 67.8 61.8 -76.4 -21.6 1.8 8.8 -0.1 38 38 A D G 3 S+ 0 0 71 1,-0.2 -26,-0.0 34,-0.1 -2,-0.0 0.610 99.2 58.8 -81.4 -9.5 3.5 10.9 2.6 39 39 A L G < S+ 0 0 65 -3,-0.9 2,-0.7 2,-0.0 -1,-0.2 0.471 78.5 112.9 -93.5 -5.9 1.1 9.4 5.1 40 40 A I < + 0 0 5 -3,-0.9 2,-0.3 -4,-0.1 6,-0.0 -0.589 42.9 156.3 -71.3 111.4 2.4 5.9 4.2 41 41 A K > - 0 0 135 -2,-0.7 3,-1.8 4,-0.0 -34,-0.3 -0.951 48.2 -80.5-137.5 157.1 4.2 4.7 7.2 42 42 A K T 3 S+ 0 0 154 -2,-0.3 -34,-0.2 1,-0.3 3,-0.1 -0.289 113.4 11.0 -59.9 136.1 5.1 1.2 8.6 43 43 A D T 3 S+ 0 0 113 -36,-3.0 -1,-0.3 1,-0.3 2,-0.2 0.463 97.3 131.5 75.0 4.5 2.3 -0.6 10.5 44 44 A A < - 0 0 25 -3,-1.8 -37,-2.3 -37,-0.2 2,-0.4 -0.520 58.1-116.8 -83.7 156.4 -0.2 2.0 9.3 45 45 A A E +A 6 0A 46 20,-0.5 20,-2.9 -39,-0.2 2,-0.3 -0.766 34.4 176.4 -99.3 138.3 -3.5 0.8 7.7 46 46 A V E -AE 5 64A 0 -41,-2.9 -41,-2.9 -2,-0.4 2,-0.4 -0.888 20.7-139.3-132.4 164.5 -4.5 1.5 4.1 47 47 A T E +AE 4 63A 43 16,-2.7 16,-2.6 -2,-0.3 2,-0.3 -0.986 28.6 163.1-127.9 140.6 -7.3 0.7 1.7 48 48 A F E -A 3 0A 0 -45,-1.6 -45,-1.9 -2,-0.4 13,-0.2 -0.960 37.0-104.9-151.7 163.0 -6.9 -0.2 -1.9 49 49 A E E - E 0 60A 49 11,-3.1 11,-1.9 -2,-0.3 2,-0.2 -0.747 41.1-113.9 -94.9 142.8 -8.6 -1.8 -4.9 50 50 A P E + E 0 59A 47 0, 0.0 2,-0.3 0, 0.0 9,-0.2 -0.497 48.0 142.5 -79.4 142.9 -7.6 -5.3 -6.1 51 51 A T E - E 0 58A 41 7,-1.7 7,-2.1 -2,-0.2 2,-0.3 -0.945 41.5-101.6-163.1 177.4 -5.8 -6.0 -9.4 52 52 A T E - E 0 57A 104 -2,-0.3 2,-0.3 5,-0.2 5,-0.2 -0.805 26.7-166.4-115.7 155.1 -3.1 -8.1 -11.0 53 53 A N - 0 0 55 3,-2.9 3,-0.2 -2,-0.3 5,-0.1 -0.833 34.5-111.9-132.8 168.5 0.5 -7.4 -11.9 54 54 A N S S+ 0 0 165 -2,-0.3 -1,-0.1 1,-0.2 3,-0.1 0.885 120.1 40.2 -68.2 -38.8 3.2 -9.0 -14.0 55 55 A K S S- 0 0 134 2,-0.1 2,-0.3 1,-0.0 -1,-0.2 0.460 134.2 -69.0 -92.0 -1.7 5.3 -9.8 -11.0 56 56 A G S S- 0 0 34 -3,-0.2 -3,-2.9 -28,-0.1 2,-0.3 -0.943 86.9 -9.7 156.9-133.5 2.3 -10.9 -8.9 57 57 A L E + E 0 52A 84 -31,-0.3 -29,-3.2 -2,-0.3 2,-0.3 -0.720 58.5 179.9-101.1 155.8 -0.6 -9.1 -7.3 58 58 A S E -dE 28 51A 4 -7,-2.1 -7,-1.7 -31,-0.3 2,-0.3 -0.901 16.4-137.5-148.0 170.3 -1.1 -5.4 -7.1 59 59 A A E - E 0 50A 3 -31,-0.9 2,-0.3 -2,-0.3 -29,-0.2 -0.976 9.9-160.8-135.4 151.1 -3.4 -2.7 -5.9 60 60 A Y E + E 0 49A 98 -11,-1.9 -11,-3.1 -2,-0.3 -26,-0.1 -0.791 68.2 33.3-122.5 170.3 -4.7 0.7 -7.2 61 61 A A E S- 0 0 53 -2,-0.3 2,-0.6 -13,-0.2 -1,-0.2 0.945 76.3-168.9 49.0 58.4 -6.3 3.7 -5.6 62 62 A V E +f 34 0B 0 -29,-2.8 -27,-2.4 -3,-0.2 -26,-0.6 -0.693 10.8 178.5 -85.5 120.4 -4.3 3.4 -2.5 63 63 A K E - E 0 47A 70 -16,-2.6 -16,-2.7 -2,-0.6 2,-0.2 -0.990 19.0-140.6-124.0 127.1 -5.4 5.6 0.4 64 64 A V E - E 0 46A 8 -2,-0.4 -18,-0.3 -18,-0.2 -24,-0.1 -0.508 12.0-132.6 -80.6 151.4 -3.8 5.6 3.8 65 65 A V - 0 0 73 -20,-2.9 -20,-0.5 -2,-0.2 2,-0.2 -0.822 26.7-165.5-106.6 88.3 -5.9 5.9 7.0 66 66 A P - 0 0 37 0, 0.0 -26,-0.0 0, 0.0 -27,-0.0 -0.510 20.4-145.0 -75.3 143.8 -4.1 8.5 9.1 67 67 A L S S+ 0 0 178 -2,-0.2 2,-0.3 1,-0.0 -2,-0.0 0.552 86.1 29.4 -84.0 -8.0 -5.0 8.8 12.8 68 68 A E S S- 0 0 116 2,-0.1 2,-0.5 0, 0.0 -1,-0.0 -0.944 72.7-132.1-145.6 163.3 -4.5 12.5 12.6 69 69 A H + 0 0 158 -2,-0.3 2,-0.4 2,-0.0 -2,-0.0 -0.811 35.3 163.5-125.0 89.6 -4.8 15.3 10.1 70 70 A H - 0 0 129 -2,-0.5 2,-0.3 2,-0.0 -2,-0.1 -0.853 38.5-112.5-109.1 144.4 -1.7 17.6 10.0 71 71 A H - 0 0 176 -2,-0.4 2,-0.4 2,-0.0 -2,-0.0 -0.542 29.5-179.4 -77.4 133.9 -0.8 20.0 7.3 72 72 A H + 0 0 148 -2,-0.3 2,-0.3 2,-0.0 -34,-0.1 -0.821 33.6 115.6-134.6 93.0 2.4 19.2 5.3 73 73 A H 0 0 171 -2,-0.4 -2,-0.0 0, 0.0 0, 0.0 -0.957 360.0 360.0-160.6 137.7 3.0 21.9 2.6 74 74 A H 0 0 238 -2,-0.3 -2,-0.0 0, 0.0 0, 0.0 -0.710 360.0 360.0 -82.3 360.0 5.7 24.5 1.9