==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=6-DEC-2009 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSLATION 23-OCT-01 1K8B . COMPND 2 MOLECULE: PROBABLE TRANSLATION INITIATION FACTOR 2 BETA . SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; . AUTHOR S.CHO,D.W.HOFFMAN . 52 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4255.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 42 80.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 15 28.8 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 2 3.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 4 7.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 15.4 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 17 32.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 39 A E 0 0 171 0, 0.0 11,-1.9 0, 0.0 2,-0.5 0.000 360.0 360.0 360.0 -76.9 6.6 0.1 4.8 2 40 A I E +A 11 0A 100 9,-0.2 2,-0.4 10,-0.1 9,-0.2 -0.906 360.0 179.7-109.4 132.8 4.1 2.9 4.4 3 41 A L E -A 10 0A 119 7,-1.6 7,-1.5 -2,-0.5 2,-0.5 -0.995 7.7-162.8-132.1 133.6 5.2 6.4 3.3 4 42 A I E +A 9 0A 88 -2,-0.4 2,-0.4 5,-0.2 5,-0.2 -0.959 12.1 169.9-123.8 131.6 2.9 9.4 2.7 5 43 A E E > -A 8 0A 158 3,-2.0 3,-2.0 -2,-0.5 2,-1.7 -0.998 68.4 -30.9-133.1 137.0 3.7 12.6 0.8 6 44 A G T 3 S- 0 0 71 -2,-0.4 3,-0.1 1,-0.3 -2,-0.0 -0.359 126.2 -35.8 58.5 -88.1 1.2 15.3 -0.2 7 45 A N T 3 S+ 0 0 98 -2,-1.7 2,-0.4 1,-0.1 -1,-0.3 0.368 120.6 80.6-146.3 -4.2 -1.9 13.1 -0.6 8 46 A R E < -A 5 0A 148 -3,-2.0 -3,-2.0 42,-0.2 2,-0.4 -0.925 54.1-166.3-113.4 138.0 -0.6 9.8 -2.0 9 47 A T E -AB 4 49A 4 40,-1.5 40,-1.2 -2,-0.4 2,-0.4 -0.970 5.5-154.5-124.7 137.8 1.1 7.0 -0.0 10 48 A I E -AB 3 48A 47 -7,-1.5 -7,-1.6 -2,-0.4 2,-0.4 -0.889 7.5-159.5-109.7 137.7 3.1 4.0 -1.4 11 49 A I E -AB 2 47A 23 36,-2.0 2,-2.0 -2,-0.4 36,-1.1 -0.949 19.3-140.4-121.2 133.3 3.4 0.7 0.5 12 50 A R + 0 0 169 -11,-1.9 3,-0.4 -2,-0.4 34,-0.1 -0.396 50.0 143.4 -83.6 59.4 6.1 -1.9 -0.0 13 51 A N > + 0 0 31 -2,-2.0 4,-2.9 34,-0.3 -1,-0.2 0.036 15.9 135.7 -88.0 26.1 3.6 -4.7 0.4 14 52 A F H > + 0 0 107 2,-0.2 4,-3.6 1,-0.2 -1,-0.2 0.830 60.5 63.4 -43.8 -44.6 5.3 -6.7 -2.3 15 53 A R H >> S+ 0 0 216 -3,-0.4 4,-1.5 2,-0.2 3,-0.7 0.956 114.5 30.0 -45.0 -73.7 5.2 -10.0 -0.2 16 54 A E H 3> S+ 0 0 118 1,-0.3 4,-3.3 2,-0.2 -1,-0.2 0.912 117.7 62.5 -49.4 -46.6 1.4 -10.2 -0.2 17 55 A L H 3X S+ 0 0 0 -4,-2.9 4,-3.3 1,-0.2 -1,-0.3 0.885 97.2 55.6 -48.1 -48.6 1.5 -8.4 -3.5 18 56 A A H < S+ 0 0 17 -4,-3.3 3,-1.1 1,-0.2 -2,-0.3 0.887 99.1 60.7 -50.2 -48.8 -1.7 -11.1 -5.2 21 59 A V H >< S+ 0 0 48 -4,-3.3 3,-3.6 3,-0.4 4,-0.3 0.929 99.1 55.5 -49.7 -50.7 -0.1 -11.0 -8.7 22 60 A N H 3< S+ 0 0 146 -4,-1.6 -1,-0.3 1,-0.3 -2,-0.2 0.833 120.6 33.1 -48.9 -34.5 -0.9 -14.6 -9.3 23 61 A R T << S- 0 0 212 -4,-1.1 -1,-0.3 -3,-1.1 -2,-0.3 -0.031 147.4 -66.3-109.9 26.8 -4.5 -13.5 -8.5 24 62 A D <> - 0 0 100 -3,-3.6 4,-2.2 -5,-0.1 -3,-0.4 0.943 51.1-168.9 84.6 77.0 -4.1 -10.0 -10.0 25 63 A E H > S+ 0 0 37 -4,-0.3 4,-1.8 1,-0.2 5,-0.2 0.915 91.4 57.3 -57.2 -43.8 -1.6 -8.1 -7.9 26 64 A E H > S+ 0 0 77 1,-0.2 4,-1.6 2,-0.2 -1,-0.2 0.955 104.7 50.2 -50.6 -55.3 -2.7 -5.0 -9.8 27 65 A F H > S+ 0 0 110 1,-0.2 4,-1.5 2,-0.2 -1,-0.2 0.889 105.2 59.1 -50.8 -48.4 -6.2 -5.6 -8.7 28 66 A F H >X S+ 0 0 52 -4,-2.2 3,-1.6 2,-0.2 4,-1.2 0.959 99.4 52.0 -51.8 -63.9 -5.2 -5.9 -5.1 29 67 A A H >X S+ 0 0 0 -4,-1.8 4,-1.5 1,-0.3 3,-0.5 0.920 105.5 59.1 -40.9 -46.0 -3.6 -2.5 -4.6 30 68 A K H >X S+ 0 0 74 -4,-1.6 4,-2.7 1,-0.2 3,-0.6 0.920 98.7 60.1 -44.1 -48.5 -6.9 -1.3 -6.0 31 69 A Y H -C 46 0A 93 3,-1.9 2,-3.4 -2,-0.4 3,-1.7 -0.990 44.1-100.6-129.7 139.4 2.3 -1.4 -9.2 44 82 A G T 3 S+ 0 0 43 -2,-0.4 3,-0.1 1,-0.2 -26,-0.0 -0.181 116.0 12.0 -56.8 70.2 3.5 -4.8 -10.2 45 83 A G T 3 S+ 0 0 12 -2,-3.4 2,-0.3 1,-0.4 -1,-0.2 0.226 121.8 57.2 149.8 -19.8 5.3 -5.4 -6.8 46 84 A R E < - C 0 43A 74 -3,-1.7 -3,-1.9 -33,-0.1 2,-0.4 -0.995 67.4-139.0-137.3 143.7 4.1 -2.8 -4.4 47 85 A L E -BC 11 42A 4 -36,-1.1 -36,-2.0 -2,-0.3 2,-0.4 -0.855 19.9-163.8-106.0 136.7 0.6 -1.8 -3.3 48 86 A I E -BC 10 41A 4 -7,-1.8 -7,-1.7 -2,-0.4 2,-0.4 -0.972 6.5-165.0-125.1 138.0 -0.3 1.9 -3.0 49 87 A L E -BC 9 40A 8 -40,-1.2 -40,-1.5 -2,-0.4 2,-0.7 -0.954 7.3-154.9-120.4 136.4 -3.2 3.5 -1.2 50 88 A Q E - C 0 39A 62 -11,-1.7 -11,-1.9 -2,-0.4 -42,-0.2 -0.894 16.2-150.0-114.0 103.8 -4.2 7.1 -1.7 51 89 A R 0 0 136 -2,-0.7 -12,-0.3 -44,-0.3 -14,-0.0 0.192 360.0 360.0 -56.3-175.3 -6.0 8.6 1.3 52 90 A R 0 0 236 -14,-0.1 -1,-0.2 -16,-0.0 -44,-0.1 -0.626 360.0 360.0 -82.8 360.0 -8.7 11.3 1.0