==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=14-APR-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER STRUCTURAL PROTEIN 13-DEC-08 2KC1 . COMPND 2 MOLECULE: MKIAA1027 PROTEIN; . SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; . AUTHOR B.T.GOULT,P.R.ELLIOTT,G.C.K.ROBERTS,D.R.CRITCHLEY, . 91 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 5883.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 71 78.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 4 4.4 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 21 23.1 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 18 19.8 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 12 13.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 12 13.2 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 1 1.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 1 0 1 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 -5 A G 0 0 73 0, 0.0 2,-0.3 0, 0.0 36,-0.0 0.000 360.0 360.0 360.0-168.7 9.6 9.5 6.2 2 -4 A I - 0 0 143 0, 0.0 39,-0.1 0, 0.0 38,-0.1 -0.961 360.0-101.4-132.8 147.4 11.9 7.7 3.8 3 -3 A D - 0 0 49 -2,-0.3 2,-0.1 1,-0.1 22,-0.1 -0.525 44.7-130.7 -68.2 121.2 11.4 5.6 0.7 4 -2 A P + 0 0 5 0, 0.0 20,-0.3 0, 0.0 -1,-0.1 -0.419 54.8 129.6 -77.7 151.1 11.7 1.9 1.6 5 -1 A F + 0 0 138 -2,-0.1 2,-0.4 3,-0.1 4,-0.2 0.200 27.5 151.5 178.9 16.2 13.9 -0.7 -0.2 6 0 A T - 0 0 74 2,-0.1 19,-0.0 18,-0.1 0, 0.0 -0.511 68.3 -53.7 -78.0 119.0 15.8 -2.3 2.6 7 1 A M S S+ 0 0 180 -2,-0.4 2,-0.8 19,-0.1 0, 0.0 -0.265 128.1 12.8 57.0-134.1 16.8 -5.9 1.9 8 2 A V S S- 0 0 115 2,-0.0 2,-0.4 18,-0.0 -2,-0.1 -0.655 85.4-176.4 -73.1 110.5 13.7 -8.0 0.9 9 3 A A - 0 0 16 -2,-0.8 2,-1.0 -4,-0.2 17,-0.2 -0.908 30.5-118.7-115.4 141.4 11.1 -5.3 0.3 10 4 A L E -A 25 0A 13 15,-2.5 15,-2.9 -2,-0.4 2,-1.0 -0.673 27.7-160.8 -79.4 103.0 7.5 -5.8 -0.6 11 5 A S E +A 24 0A 29 -2,-1.0 71,-3.2 13,-0.3 72,-0.3 -0.771 18.1 175.1 -87.9 103.7 7.0 -4.2 -4.0 12 6 A L E -A 23 0A 0 11,-2.5 11,-3.5 -2,-1.0 2,-0.9 -0.810 35.8-119.2-109.4 152.5 3.3 -3.6 -4.5 13 7 A K E -Ab 22 84A 70 70,-3.2 72,-2.6 -2,-0.3 2,-0.6 -0.798 31.2-152.5 -91.0 104.5 1.6 -1.8 -7.3 14 8 A I E -Ab 21 85A 0 7,-3.3 7,-3.1 -2,-0.9 2,-0.7 -0.702 6.3-159.9 -85.3 117.8 -0.2 1.1 -5.6 15 9 A S E +Ab 20 86A 11 70,-2.4 72,-0.7 -2,-0.6 2,-0.6 -0.876 14.0 176.6-100.7 114.8 -3.3 2.2 -7.5 16 10 A I E > S-A 19 0A 6 3,-2.9 3,-2.6 -2,-0.7 2,-1.4 -0.909 71.7 -58.2-114.4 99.3 -4.5 5.7 -6.8 17 11 A G T 3 S- 0 0 47 -2,-0.6 -2,-0.0 1,-0.3 71,-0.0 -0.506 124.8 -17.0 68.3 -93.5 -7.5 6.2 -9.0 18 12 A N T 3 S+ 0 0 158 -2,-1.4 2,-0.8 -3,-0.0 -1,-0.3 0.314 116.1 101.5-121.7 1.0 -5.8 5.7 -12.4 19 13 A V E < -A 16 0A 50 -3,-2.6 -3,-2.9 2,-0.0 2,-0.7 -0.805 50.0-172.1 -95.8 107.7 -2.2 6.0 -11.2 20 14 A V E +A 15 0A 84 -2,-0.8 2,-0.5 -5,-0.2 -5,-0.2 -0.886 9.5 177.2-101.8 110.2 -0.5 2.7 -10.7 21 15 A K E -A 14 0A 106 -7,-3.1 -7,-3.3 -2,-0.7 2,-0.8 -0.960 30.1-132.1-119.7 122.1 2.8 3.1 -9.1 22 16 A T E -A 13 0A 97 -2,-0.5 2,-0.4 -9,-0.3 -9,-0.3 -0.612 35.4-173.0 -70.1 109.4 5.1 0.2 -8.1 23 17 A M E -A 12 0A 9 -11,-3.5 -11,-2.5 -2,-0.8 2,-0.6 -0.886 20.7-138.2-112.6 139.3 6.1 1.0 -4.6 24 18 A Q E -A 11 0A 80 -2,-0.4 2,-0.3 -20,-0.3 -13,-0.3 -0.859 27.3-178.7 -97.5 117.7 8.6 -0.7 -2.4 25 19 A F E -A 10 0A 0 -15,-2.9 -15,-2.5 -2,-0.6 -22,-0.0 -0.830 30.2-110.6-113.7 154.4 7.5 -1.2 1.2 26 20 A E > - 0 0 43 -2,-0.3 3,-1.5 -17,-0.2 48,-0.3 -0.592 27.8-125.0 -79.5 146.1 9.2 -2.7 4.2 27 21 A P T 3 S+ 0 0 35 0, 0.0 48,-1.8 0, 0.0 49,-0.3 0.884 109.9 46.8 -61.3 -40.7 7.7 -6.1 5.3 28 22 A S T 3 S+ 0 0 102 46,-0.1 2,-0.3 45,-0.1 -2,-0.0 0.320 85.3 128.8 -85.8 9.5 7.1 -5.0 8.9 29 23 A T < - 0 0 9 -3,-1.5 45,-2.6 44,-0.1 46,-0.3 -0.488 57.4-130.1 -71.0 128.8 5.6 -1.7 7.7 30 24 A M B > -E 73 0B 54 43,-0.3 4,-2.5 -2,-0.3 43,-0.3 -0.401 19.4-113.8 -75.6 156.9 2.2 -0.9 9.3 31 25 A V H > S+ 0 0 6 41,-3.2 4,-2.1 38,-0.5 39,-0.2 0.887 118.2 49.2 -61.7 -41.0 -0.7 0.0 7.1 32 26 A Y H > S+ 0 0 130 38,-1.3 4,-1.5 40,-0.3 -1,-0.3 0.813 113.3 49.1 -67.6 -26.7 -0.9 3.6 8.5 33 27 A D H > S+ 0 0 37 37,-0.3 4,-1.4 -3,-0.3 -2,-0.2 0.838 106.9 53.4 -81.2 -34.8 2.8 3.8 7.9 34 28 A A H X S+ 0 0 0 -4,-2.5 4,-2.1 2,-0.2 -2,-0.2 0.886 108.6 50.7 -64.3 -39.2 2.5 2.5 4.3 35 29 A C H X S+ 0 0 21 -4,-2.1 4,-2.6 1,-0.2 5,-0.3 0.908 105.8 56.1 -60.8 -42.4 -0.1 5.3 3.8 36 30 A R H X S+ 0 0 91 -4,-1.5 4,-0.9 1,-0.2 -2,-0.2 0.831 107.8 50.2 -57.0 -33.4 2.5 7.7 5.2 37 31 A M H X S+ 0 0 18 -4,-1.4 4,-1.9 2,-0.2 5,-0.2 0.925 110.8 46.1 -73.8 -44.7 4.8 6.4 2.5 38 32 A I H X S+ 0 0 0 -4,-2.1 4,-4.1 1,-0.2 7,-0.3 0.940 108.2 55.2 -66.1 -47.1 2.4 6.9 -0.4 39 33 A R H < S+ 0 0 105 -4,-2.6 -1,-0.2 1,-0.2 7,-0.2 0.847 114.9 42.1 -52.9 -35.7 1.3 10.4 0.7 40 34 A E H < S+ 0 0 84 -4,-0.9 -1,-0.2 -5,-0.3 -2,-0.2 0.796 122.8 36.5 -84.1 -29.7 4.9 11.4 0.6 41 35 A R H < S+ 0 0 138 -4,-1.9 -2,-0.2 1,-0.3 -3,-0.2 0.810 126.4 34.7 -94.3 -33.2 5.9 9.6 -2.6 42 36 A I >< - 0 0 10 -4,-4.1 3,-1.1 -5,-0.2 -1,-0.3 -0.983 67.4-158.6-124.6 120.9 2.7 10.2 -4.5 43 37 A P G > S+ 0 0 103 0, 0.0 3,-1.9 0, 0.0 -1,-0.1 0.719 84.0 75.3 -73.1 -20.8 0.9 13.5 -4.0 44 38 A E G > S+ 0 0 80 1,-0.3 3,-1.2 2,-0.1 -5,-0.1 0.759 80.5 71.2 -68.3 -23.0 -2.5 12.2 -5.2 45 39 A A G X S+ 0 0 1 -3,-1.1 3,-0.6 1,-0.3 -1,-0.3 0.753 87.6 66.7 -59.7 -23.5 -2.9 10.3 -1.9 46 40 A L G < + 0 0 116 -3,-1.9 -1,-0.3 1,-0.2 -2,-0.1 0.047 64.6 113.0 -88.4 27.1 -3.4 13.7 -0.3 47 41 A A G < S- 0 0 76 -3,-1.2 -1,-0.2 2,-0.1 -2,-0.1 0.607 89.6 -13.9 -74.4 -11.7 -6.7 14.1 -2.3 48 42 A G S < S- 0 0 28 -3,-0.6 5,-0.1 -4,-0.1 0, 0.0 -0.897 102.8 -30.1-165.7-166.8 -8.5 14.0 1.0 49 43 A P >> - 0 0 76 0, 0.0 4,-1.6 0, 0.0 3,-0.7 -0.365 52.6-125.6 -68.0 142.8 -8.4 13.1 4.8 50 44 A P T 34 S+ 0 0 102 0, 0.0 -3,-0.0 0, 0.0 -11,-0.0 0.803 110.0 41.3 -62.2 -34.3 -6.0 10.4 5.8 51 45 A N T 34 S+ 0 0 140 1,-0.2 39,-0.1 3,-0.1 0, 0.0 0.618 106.9 63.8 -88.7 -13.7 -8.6 8.2 7.6 52 46 A D T <4 S+ 0 0 56 -3,-0.7 38,-3.3 37,-0.1 -1,-0.2 0.824 107.2 48.7 -77.3 -31.9 -11.1 8.9 4.9 53 47 A F E < S+C 89 0A 27 -4,-1.6 2,-0.3 36,-0.3 36,-0.3 -0.405 74.1 169.7 -93.2 176.1 -8.9 7.0 2.5 54 48 A G E -C 88 0A 10 34,-2.5 34,-1.8 -2,-0.1 2,-0.5 -0.984 38.5 -77.8-174.0 173.8 -7.2 3.7 3.0 55 49 A L E -CD 87 68A 1 13,-0.5 13,-2.4 -2,-0.3 2,-0.6 -0.768 37.7-163.7 -90.9 125.9 -5.3 0.8 1.6 56 50 A F E -CD 86 67A 35 30,-1.4 30,-2.9 -2,-0.5 2,-0.4 -0.930 15.7-137.6-115.1 109.6 -7.4 -1.7 -0.4 57 51 A L E -CD 85 66A 18 9,-2.7 9,-0.6 -2,-0.6 2,-0.4 -0.519 24.2-145.8 -65.9 117.2 -5.8 -5.1 -1.0 58 52 A S E +C 84 0A 23 26,-2.1 26,-0.6 -2,-0.4 2,-0.1 -0.748 23.9 171.1 -95.0 132.9 -6.6 -5.8 -4.7 59 53 A D - 0 0 99 -2,-0.4 6,-0.1 2,-0.4 -1,-0.0 -0.324 52.7 -85.3-116.4-160.1 -7.2 -9.4 -5.8 60 54 A D S S+ 0 0 160 -2,-0.1 -2,-0.0 1,-0.1 3,-0.0 0.772 117.4 48.4 -83.6 -27.1 -8.5 -10.9 -9.1 61 55 A D S >> S- 0 0 54 1,-0.1 3,-1.6 0, 0.0 4,-0.5 -0.933 81.2-135.2-114.9 137.1 -12.1 -10.3 -8.0 62 56 A P T 34 S+ 0 0 102 0, 0.0 3,-0.5 0, 0.0 -1,-0.1 0.759 106.4 56.4 -60.2 -25.6 -13.3 -7.0 -6.6 63 57 A K T 34 S+ 0 0 161 1,-0.2 -3,-0.0 3,-0.0 0, 0.0 0.600 99.9 59.2 -84.6 -11.7 -15.2 -8.8 -3.8 64 58 A K T <4 S+ 0 0 137 -3,-1.6 2,-0.3 2,-0.1 -1,-0.2 0.572 83.2 103.8 -89.6 -12.0 -12.0 -10.5 -2.6 65 59 A G < - 0 0 13 -4,-0.5 2,-0.3 -3,-0.5 -7,-0.2 -0.562 55.0-168.9 -74.7 131.4 -10.4 -7.1 -2.0 66 60 A I E -D 57 0A 82 -9,-0.6 -9,-2.7 -2,-0.3 2,-0.6 -0.819 24.9-109.1-122.3 159.8 -10.2 -6.1 1.6 67 61 A W E -D 56 0A 89 -2,-0.3 2,-0.3 -11,-0.2 -11,-0.2 -0.787 31.8-131.8 -92.4 118.1 -9.4 -3.0 3.6 68 62 A L E -D 55 0A 4 -13,-2.4 -13,-0.5 -2,-0.6 2,-0.3 -0.513 21.2-126.7 -70.2 127.6 -6.1 -3.1 5.4 69 63 A E > - 0 0 107 -2,-0.3 3,-2.3 1,-0.1 -38,-0.5 -0.598 10.0-131.5 -76.8 134.9 -6.4 -2.0 9.0 70 64 A A T 3 S+ 0 0 51 -2,-0.3 -38,-1.3 1,-0.3 -39,-0.3 0.817 106.9 58.2 -52.9 -34.3 -4.0 0.8 10.1 71 65 A G T 3 S+ 0 0 54 -40,-0.1 -1,-0.3 -41,-0.1 2,-0.2 0.425 99.0 74.2 -82.5 2.5 -3.0 -1.2 13.2 72 66 A K S < S- 0 0 56 -3,-2.3 -41,-3.2 1,-0.0 -40,-0.3 -0.660 79.2-119.5-108.6 168.2 -1.9 -4.2 11.1 73 67 A A B > -E 30 0B 19 -43,-0.3 4,-0.6 -2,-0.2 -43,-0.3 -0.609 19.9-116.7-104.1 167.5 1.2 -4.6 8.9 74 68 A L T >4>S+ 0 0 0 -45,-2.6 5,-1.4 -48,-0.3 3,-1.4 0.924 116.8 50.5 -68.2 -45.7 1.6 -5.3 5.2 75 69 A D G >45S+ 0 0 105 -48,-1.8 3,-1.9 1,-0.3 -1,-0.2 0.835 101.2 66.2 -60.1 -31.2 3.2 -8.7 5.8 76 70 A Y G 345S+ 0 0 154 1,-0.3 -1,-0.3 -49,-0.3 -2,-0.2 0.780 98.0 53.0 -60.9 -28.0 0.3 -9.5 8.0 77 71 A Y G <<5S- 0 0 32 -3,-1.4 -1,-0.3 -4,-0.6 -2,-0.2 0.151 119.3-108.7 -98.3 18.1 -2.0 -9.3 5.0 78 72 A M T < 5 + 0 0 165 -3,-1.9 -3,-0.2 1,-0.2 -2,-0.1 0.749 60.2 168.9 63.8 25.8 0.1 -11.8 3.0 79 73 A L < + 0 0 8 -5,-1.4 2,-0.2 -52,-0.1 -1,-0.2 -0.427 7.8 179.6 -72.8 144.6 1.3 -9.1 0.7 80 74 A R > - 0 0 154 -2,-0.1 3,-1.3 -69,-0.1 2,-0.7 -0.806 39.7 -75.1-136.0 174.5 4.1 -9.9 -1.7 81 75 A N T 3 S+ 0 0 123 -2,-0.2 -69,-0.2 1,-0.2 3,-0.1 -0.675 120.3 30.1 -76.5 114.1 6.3 -8.3 -4.4 82 76 A G T 3 S+ 0 0 48 -71,-3.2 -1,-0.2 -2,-0.7 -70,-0.2 0.195 89.9 125.1 120.7 -14.0 4.0 -8.1 -7.4 83 77 A D < - 0 0 24 -3,-1.3 -70,-3.2 -72,-0.3 2,-0.4 -0.302 55.8-126.7 -74.1 161.2 0.7 -7.7 -5.7 84 78 A T E +bC 13 58A 42 -26,-0.6 -26,-2.1 -72,-0.2 2,-0.4 -0.922 25.3 178.4-112.7 133.6 -1.6 -4.8 -6.3 85 79 A M E -bC 14 57A 0 -72,-2.6 -70,-2.4 -2,-0.4 2,-0.8 -0.991 17.7-147.5-135.2 130.3 -3.1 -2.5 -3.7 86 80 A E E -bC 15 56A 31 -30,-2.9 -30,-1.4 -2,-0.4 2,-1.1 -0.836 3.3-155.2-102.0 105.5 -5.3 0.4 -4.4 87 81 A Y E + C 0 55A 3 -2,-0.8 2,-0.3 -72,-0.7 -32,-0.2 -0.720 43.4 144.7 -75.7 103.7 -4.9 3.3 -2.0 88 82 A R E - C 0 54A 114 -34,-1.8 -34,-2.5 -2,-1.1 2,-0.2 -0.805 52.9 -75.2-137.8 172.6 -8.4 4.7 -2.4 89 83 A K E - C 0 53A 79 -36,-0.3 -36,-0.3 -2,-0.3 2,-0.3 -0.500 44.4-121.0 -74.6 139.7 -11.1 6.5 -0.5 90 84 A K 0 0 62 -38,-3.3 -1,-0.1 -2,-0.2 -34,-0.0 -0.629 360.0 360.0 -76.6 142.5 -13.3 4.5 1.9 91 85 A Q 0 0 223 -2,-0.3 -2,-0.1 -38,-0.0 -39,-0.0 -0.229 360.0 360.0 42.7 360.0 -17.0 4.6 1.1