==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=2-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER TRANSCRIPTION REGULATOR 07-MAY-09 2KIQ . COMPND 2 MOLECULE: TRANSCRIPTION ELONGATION REGULATOR 1; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR J.ZENG,J.BOYLES,C.TRIPATHY,A.YAN,P.ZHOU,B.R.DONALD . 57 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 4995.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 38 66.7 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 2 3.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 4 7.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 32 56.1 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 1 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 5 A I 0 0 204 0, 0.0 5,-0.1 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 26.8 -11.8 -9.3 -12.4 2 6 A M > + 0 0 138 1,-0.1 4,-3.2 3,-0.1 5,-0.2 0.720 360.0 137.6 47.3 20.1 -8.9 -8.1 -10.1 3 7 A Q H > + 0 0 138 2,-0.2 4,-2.6 1,-0.2 5,-0.2 0.928 69.1 45.1 -59.7 -47.6 -11.0 -4.8 -10.2 4 8 A A H > S+ 0 0 72 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.903 116.3 46.9 -62.5 -43.1 -10.5 -4.2 -6.4 5 9 A K H > S+ 0 0 111 2,-0.2 4,-2.0 1,-0.2 -2,-0.2 0.912 113.9 46.6 -65.8 -44.3 -6.8 -5.0 -6.7 6 10 A E H X S+ 0 0 77 -4,-3.2 4,-2.4 1,-0.2 -2,-0.2 0.904 111.4 52.1 -64.8 -40.7 -6.3 -2.8 -9.8 7 11 A D H X S+ 0 0 54 -4,-2.6 4,-1.9 -5,-0.2 -1,-0.2 0.886 108.7 51.9 -62.6 -39.2 -8.2 0.1 -8.1 8 12 A F H X S+ 0 0 25 -4,-1.8 4,-2.1 2,-0.2 -2,-0.2 0.928 111.1 45.8 -62.9 -47.7 -5.9 -0.3 -5.0 9 13 A K H X S+ 0 0 104 -4,-2.0 4,-2.6 1,-0.2 5,-0.3 0.902 111.1 53.3 -62.8 -42.2 -2.6 -0.0 -7.2 10 14 A K H X S+ 0 0 91 -4,-2.4 4,-1.3 1,-0.2 -1,-0.2 0.887 110.5 47.5 -60.1 -40.8 -4.1 3.0 -9.1 11 15 A M H X S+ 0 0 57 -4,-1.9 4,-1.5 -5,-0.2 -1,-0.2 0.917 112.9 48.5 -66.1 -45.0 -4.7 4.8 -5.8 12 16 A M H < S+ 0 0 6 -4,-2.1 -2,-0.2 2,-0.2 -1,-0.2 0.890 113.0 45.7 -63.7 -43.5 -1.1 4.0 -4.5 13 17 A E H < S+ 0 0 108 -4,-2.6 3,-0.4 1,-0.2 -1,-0.2 0.780 121.2 40.8 -70.1 -29.1 0.7 5.2 -7.7 14 18 A E H < S+ 0 0 147 -4,-1.3 -2,-0.2 -5,-0.3 -1,-0.2 0.607 107.8 61.4 -91.2 -18.5 -1.6 8.4 -7.7 15 19 A A S < S+ 0 0 23 -4,-1.5 -1,-0.2 -5,-0.1 -2,-0.1 0.167 78.3 179.2 -90.7 11.7 -1.3 8.8 -3.8 16 20 A K + 0 0 148 -3,-0.4 2,-0.2 -5,-0.1 -3,-0.1 0.146 13.8 167.2 -24.2 116.1 2.6 9.3 -4.1 17 21 A F - 0 0 41 -5,-0.1 -1,-0.1 1,-0.1 -2,-0.0 -0.799 46.7 -52.5-133.6 171.6 3.5 9.8 -0.4 18 22 A N > - 0 0 116 -2,-0.2 3,-1.4 1,-0.2 -1,-0.1 -0.254 45.7-146.8 -49.3 121.5 6.8 9.9 1.7 19 23 A P T 3 S+ 0 0 67 0, 0.0 -1,-0.2 0, 0.0 38,-0.1 0.667 97.9 59.3 -68.6 -15.9 8.7 6.4 0.9 20 24 A R T 3 S+ 0 0 209 2,-0.1 -2,-0.1 33,-0.0 2,-0.1 0.483 82.9 107.3 -90.9 -4.3 10.0 6.4 4.5 21 25 A A < - 0 0 30 -3,-1.4 2,-0.2 1,-0.1 -4,-0.0 -0.381 67.8-128.1 -71.4 153.1 6.4 6.4 6.0 22 26 A T > - 0 0 76 1,-0.1 4,-2.3 -2,-0.1 5,-0.2 -0.522 21.3-106.8 -97.6 168.3 5.2 3.1 7.5 23 27 A F H > S+ 0 0 36 1,-0.2 4,-3.6 2,-0.2 5,-0.3 0.888 119.1 56.2 -60.5 -43.9 1.9 1.1 6.8 24 28 A S H > S+ 0 0 88 2,-0.2 4,-1.9 1,-0.2 -1,-0.2 0.897 111.8 42.9 -57.6 -42.0 0.4 2.2 10.2 25 29 A E H > S+ 0 0 139 2,-0.2 4,-1.3 1,-0.2 -2,-0.2 0.918 119.2 43.0 -70.3 -45.2 0.9 6.0 9.3 26 30 A F H X S+ 0 0 17 -4,-2.3 4,-1.9 2,-0.2 -2,-0.2 0.904 116.9 47.0 -66.0 -44.8 -0.3 5.5 5.6 27 31 A A H X S+ 0 0 9 -4,-3.6 4,-1.3 1,-0.2 -2,-0.2 0.882 106.9 57.7 -65.9 -40.0 -3.3 3.3 6.7 28 32 A A H < S+ 0 0 69 -4,-1.9 4,-0.3 -5,-0.3 -1,-0.2 0.864 110.1 45.1 -59.1 -37.4 -4.3 5.7 9.5 29 33 A K H < S+ 0 0 171 -4,-1.3 3,-0.3 1,-0.2 -1,-0.2 0.890 125.0 31.3 -72.4 -43.3 -4.6 8.5 6.8 30 34 A H H >< S+ 0 0 35 -4,-1.9 3,-2.0 1,-0.2 6,-0.3 0.332 89.7 104.4 -95.4 2.0 -6.6 6.2 4.3 31 35 A A T 3< S+ 0 0 49 -4,-1.3 6,-0.2 1,-0.3 -1,-0.2 0.820 82.0 50.3 -52.3 -35.4 -8.3 4.2 7.1 32 36 A K T 3 S+ 0 0 201 -3,-0.3 -1,-0.3 -4,-0.3 -2,-0.1 0.590 87.7 110.4 -80.1 -11.9 -11.5 6.1 6.4 33 37 A D S X> S- 0 0 46 -3,-2.0 4,-1.0 1,-0.1 3,-0.9 -0.406 72.3-135.0 -66.0 137.7 -11.2 5.3 2.6 34 38 A S H 3> S+ 0 0 83 1,-0.2 4,-0.9 2,-0.2 -1,-0.1 0.816 105.5 58.7 -62.3 -33.4 -13.9 2.8 1.4 35 39 A R H 3> S+ 0 0 106 1,-0.2 4,-0.7 2,-0.2 -1,-0.2 0.714 98.7 60.8 -68.5 -24.6 -11.2 0.8 -0.5 36 40 A F H X4 S+ 0 0 37 -3,-0.9 3,-0.7 -6,-0.3 -1,-0.2 0.955 109.4 37.7 -68.8 -52.3 -9.3 0.3 2.8 37 41 A K H 3< S+ 0 0 164 -4,-1.0 -1,-0.2 1,-0.2 -2,-0.2 0.630 102.2 77.5 -73.6 -16.0 -12.2 -1.7 4.6 38 42 A A H 3< S+ 0 0 73 -4,-0.9 2,-0.6 1,-0.1 -1,-0.2 0.850 84.3 69.6 -63.3 -34.6 -13.1 -3.4 1.2 39 43 A I << - 0 0 31 -3,-0.7 -1,-0.1 -4,-0.7 6,-0.0 -0.782 66.2-168.6 -89.3 119.0 -10.1 -5.7 1.7 40 44 A E + 0 0 169 -2,-0.6 2,-0.7 1,-0.1 -1,-0.2 0.868 69.2 76.9 -70.5 -43.8 -10.7 -8.2 4.6 41 45 A K > - 0 0 139 1,-0.2 4,-1.1 2,-0.0 3,-0.3 -0.665 56.0-172.9 -80.4 111.7 -7.0 -9.4 4.8 42 46 A M H > S+ 0 0 127 -2,-0.7 4,-2.4 1,-0.2 -1,-0.2 0.796 85.8 63.3 -66.9 -33.5 -4.7 -6.9 6.5 43 47 A K H > S+ 0 0 172 2,-0.2 4,-2.7 1,-0.2 -1,-0.2 0.860 99.0 52.8 -61.9 -38.7 -1.7 -9.1 5.5 44 48 A D H > S+ 0 0 73 -3,-0.3 4,-2.4 2,-0.2 -1,-0.2 0.917 111.1 46.9 -65.2 -41.4 -2.4 -8.5 1.7 45 49 A R H X S+ 0 0 14 -4,-1.1 4,-2.3 2,-0.2 -2,-0.2 0.909 114.1 47.1 -64.5 -43.1 -2.4 -4.7 2.3 46 50 A E H X S+ 0 0 104 -4,-2.4 4,-2.4 2,-0.2 -2,-0.2 0.905 112.3 50.4 -65.2 -42.2 0.9 -4.9 4.4 47 51 A A H X S+ 0 0 57 -4,-2.7 4,-2.2 1,-0.2 -2,-0.2 0.928 113.5 45.2 -60.6 -46.7 2.5 -7.2 1.6 48 52 A L H X S+ 0 0 25 -4,-2.4 4,-3.0 2,-0.2 -2,-0.2 0.880 111.9 52.5 -63.4 -42.3 1.5 -4.7 -1.1 49 53 A F H X S+ 0 0 9 -4,-2.3 4,-2.4 2,-0.2 5,-0.2 0.930 111.6 45.1 -60.7 -47.9 2.7 -1.7 1.0 50 54 A N H X S+ 0 0 94 -4,-2.4 4,-2.0 1,-0.2 -2,-0.2 0.897 117.1 45.9 -62.8 -41.5 6.2 -3.4 1.5 51 55 A E H X S+ 0 0 129 -4,-2.2 4,-2.9 -5,-0.2 -2,-0.2 0.872 111.4 52.8 -68.1 -40.8 6.3 -4.3 -2.2 52 56 A F H X S+ 0 0 44 -4,-3.0 4,-3.2 2,-0.2 5,-0.2 0.931 112.6 43.1 -62.0 -48.1 5.2 -0.7 -3.3 53 57 A V H X S+ 0 0 25 -4,-2.4 4,-2.2 2,-0.2 -2,-0.2 0.914 118.3 45.5 -63.6 -45.1 7.9 1.0 -1.2 54 58 A A H < S+ 0 0 77 -4,-2.0 -2,-0.2 -5,-0.2 -1,-0.2 0.889 119.3 41.8 -65.7 -40.4 10.6 -1.5 -2.4 55 59 A A H < S+ 0 0 82 -4,-2.9 -2,-0.2 2,-0.2 -1,-0.2 0.866 114.8 50.4 -73.0 -41.2 9.3 -1.2 -6.0 56 60 A A H < 0 0 53 -4,-3.2 -2,-0.2 -5,-0.2 -3,-0.2 0.885 360.0 360.0 -66.2 -40.5 8.9 2.6 -5.9 57 61 A R < 0 0 206 -4,-2.2 -2,-0.2 -5,-0.2 -1,-0.2 0.885 360.0 360.0 -71.7 360.0 12.5 3.2 -4.5