==== Secondary Structure Definition by the program DSSP, updated CMBI version by ElmK / April 1,2000 ==== DATE=19-JAN-2010 . REFERENCE W. KABSCH AND C.SANDER, BIOPOLYMERS 22 (1983) 2577-2637 . HEADER PROTEIN BINDING 18-DEC-09 2KRK . COMPND 2 MOLECULE: 26S PROTEASE REGULATORY SUBUNIT 8; . SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; . AUTHOR G.LIU,J.JANJUA,R.XIAO,C.CICCOSANTI,R.SHASTRY,J.K.EVERETT, . 86 1 0 0 0 TOTAL NUMBER OF RESIDUES, NUMBER OF CHAINS, NUMBER OF SS-BRIDGES(TOTAL,INTRACHAIN,INTERCHAIN) . 6329.0 ACCESSIBLE SURFACE OF PROTEIN (ANGSTROM**2) . 59 68.6 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(J) , SAME NUMBER PER 100 RESIDUES . 3 3.5 TOTAL NUMBER OF HYDROGEN BONDS IN PARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS IN ANTIPARALLEL BRIDGES, SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-5), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-4), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-3), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-2), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I-1), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+0), SAME NUMBER PER 100 RESIDUES . 0 0.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+1), SAME NUMBER PER 100 RESIDUES . 9 10.5 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+2), SAME NUMBER PER 100 RESIDUES . 8 9.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+3), SAME NUMBER PER 100 RESIDUES . 37 43.0 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+4), SAME NUMBER PER 100 RESIDUES . 2 2.3 TOTAL NUMBER OF HYDROGEN BONDS OF TYPE O(I)-->H-N(I+5), SAME NUMBER PER 100 RESIDUES . 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 *** HISTOGRAMS OF *** . 0 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 RESIDUES PER ALPHA HELIX . 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 PARALLEL BRIDGES PER LADDER . 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 ANTIPARALLEL BRIDGES PER LADDER . 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 LADDERS PER SHEET . # RESIDUE AA STRUCTURE BP1 BP2 ACC N-H-->O O-->H-N N-H-->O O-->H-N TCO KAPPA ALPHA PHI PSI X-CA Y-CA Z-CA 1 1 A M 0 0 230 0, 0.0 2,-0.0 0, 0.0 0, 0.0 0.000 360.0 360.0 360.0 139.9 -1.8 -35.4 -5.4 2 2 A G - 0 0 50 1,-0.1 2,-1.3 2,-0.0 3,-0.1 0.077 360.0 -78.4 108.5 148.5 -0.6 -31.9 -6.2 3 3 A H + 0 0 168 1,-0.2 -1,-0.1 2,-0.1 0, 0.0 -0.679 48.2 173.1 -80.1 94.4 -1.3 -28.9 -8.5 4 4 A H S S+ 0 0 144 -2,-1.3 -1,-0.2 3,-0.0 3,-0.1 0.581 76.5 11.4 -84.5 -10.9 0.4 -30.2 -11.6 5 5 A H S S+ 0 0 162 1,-0.2 2,-1.3 -3,-0.1 -2,-0.1 0.576 114.8 63.4-127.6 -66.1 -0.8 -27.3 -13.8 6 6 A H - 0 0 169 1,-0.1 2,-0.9 2,-0.0 -1,-0.2 -0.540 63.7-179.5 -69.5 95.2 -2.4 -24.4 -11.9 7 7 A H - 0 0 167 -2,-1.3 2,-0.7 -3,-0.1 -1,-0.1 -0.798 1.8-176.2-101.7 92.6 0.6 -23.2 -9.9 8 8 A H - 0 0 127 -2,-0.9 2,-0.1 2,-0.0 -5,-0.0 -0.807 19.5-137.3 -93.8 113.5 -0.5 -20.2 -7.8 9 9 A S - 0 0 85 -2,-0.7 38,-0.1 1,-0.0 -2,-0.0 -0.398 22.4-178.0 -67.3 139.6 2.3 -18.6 -5.7 10 10 A H - 0 0 110 -2,-0.1 2,-0.1 36,-0.1 36,-0.1 -0.808 8.2-160.0-145.0 101.0 1.4 -17.7 -2.1 11 11 A P - 0 0 32 0, 0.0 33,-0.1 0, 0.0 5,-0.0 -0.412 25.2-105.7 -78.5 154.9 4.0 -15.9 0.1 12 12 A N > - 0 0 124 -2,-0.1 4,-3.0 1,-0.0 5,-0.3 -0.019 42.8 -88.3 -67.0 179.5 3.9 -15.8 4.0 13 13 A E H > S+ 0 0 100 2,-0.2 4,-2.4 1,-0.2 5,-0.2 0.969 130.1 37.0 -56.4 -59.0 2.9 -12.8 6.0 14 14 A E H > S+ 0 0 91 1,-0.2 4,-2.4 2,-0.2 -1,-0.2 0.908 116.2 55.4 -59.4 -43.4 6.4 -11.3 6.2 15 15 A A H > S+ 0 0 40 1,-0.2 4,-0.7 2,-0.2 -2,-0.2 0.916 113.9 38.9 -58.1 -47.4 7.2 -12.5 2.7 16 16 A R H X S+ 0 0 11 -4,-3.0 4,-0.8 1,-0.2 3,-0.4 0.846 113.8 55.7 -72.2 -34.4 4.1 -10.6 1.2 17 17 A L H >X S+ 0 0 5 -4,-2.4 4,-2.4 -5,-0.3 3,-0.6 0.852 97.8 62.7 -67.3 -34.7 4.7 -7.6 3.6 18 18 A D H 3X S+ 0 0 67 -4,-2.4 4,-2.4 1,-0.2 -1,-0.2 0.855 93.9 63.8 -55.8 -35.0 8.3 -7.2 2.3 19 19 A I H 3X S+ 0 0 32 -4,-0.7 4,-2.4 -3,-0.4 -1,-0.2 0.895 107.4 41.2 -57.1 -40.9 6.7 -6.5 -1.2 20 20 A L H < S+ 0 0 94 -4,-2.4 3,-1.6 -5,-0.2 -2,-0.2 0.960 115.5 45.5 -77.9 -56.7 10.1 -2.6 -1.1 23 23 A H H 3< S+ 0 0 77 -4,-2.4 3,-0.3 1,-0.3 4,-0.2 0.487 107.7 60.3 -75.2 -0.8 7.6 -0.9 -3.4 24 24 A S T >< S+ 0 0 2 -4,-1.2 3,-0.7 1,-0.1 -1,-0.3 0.562 78.3 89.2 -96.6 -9.7 7.0 1.9 -0.9 25 25 A R T < S+ 0 0 204 -3,-1.6 -1,-0.1 1,-0.2 -2,-0.1 0.436 84.5 54.4 -73.4 1.6 10.6 3.1 -0.8 26 26 A K T 3 S+ 0 0 179 -3,-0.3 -1,-0.2 -4,-0.1 2,-0.2 0.720 98.3 67.4-103.1 -30.3 10.1 5.5 -3.8 27 27 A M S < S- 0 0 56 -3,-0.7 2,-0.8 -4,-0.2 41,-0.1 -0.630 98.4 -95.4 -91.5 151.0 7.1 7.5 -2.4 28 28 A N E -a 68 0A 100 39,-0.5 41,-2.5 -2,-0.2 2,-0.2 -0.512 43.6-152.5 -65.8 103.6 7.3 9.9 0.7 29 29 A L E -a 69 0A 64 -2,-0.8 41,-0.2 39,-0.2 -1,-0.0 -0.589 19.1-111.2 -78.5 141.0 6.2 7.7 3.6 30 30 A T > - 0 0 34 39,-2.2 3,-0.8 -2,-0.2 -1,-0.1 0.008 33.4 -95.1 -64.5 176.9 4.6 9.5 6.5 31 31 A R T 3 S+ 0 0 253 1,-0.3 -1,-0.1 37,-0.1 2,-0.1 0.858 119.5 20.2 -66.4 -37.0 6.2 9.9 10.0 32 32 A G T 3 S+ 0 0 71 2,-0.0 2,-0.4 0, 0.0 -1,-0.3 -0.452 80.3 170.4-132.3 65.0 4.4 6.8 11.5 33 33 A I < - 0 0 41 -3,-0.8 2,-0.7 37,-0.1 37,-0.1 -0.609 19.9-153.6 -81.7 127.1 3.2 4.6 8.5 34 34 A N + 0 0 73 -2,-0.4 4,-0.3 1,-0.2 -2,-0.0 -0.875 25.6 162.9-103.5 107.3 1.8 1.2 9.5 35 35 A L > + 0 0 22 -2,-0.7 4,-2.2 2,-0.1 5,-0.2 0.670 68.4 74.5 -92.2 -22.0 2.2 -1.4 6.7 36 36 A R H > S+ 0 0 87 1,-0.2 4,-1.7 2,-0.2 -1,-0.1 0.950 95.8 49.2 -52.7 -52.8 1.6 -4.4 9.0 37 37 A K H > S+ 0 0 60 1,-0.2 4,-0.6 2,-0.2 -1,-0.2 0.839 109.8 54.6 -56.4 -35.0 -2.1 -3.6 9.2 38 38 A I H >4 S+ 0 0 0 -4,-0.3 3,-1.3 1,-0.2 4,-0.4 0.956 106.4 46.7 -68.1 -52.7 -2.2 -3.4 5.4 39 39 A A H >< S+ 0 0 5 -4,-2.2 3,-1.3 1,-0.3 -1,-0.2 0.842 106.9 60.2 -59.9 -33.9 -0.7 -6.8 4.6 40 40 A E H 3< S+ 0 0 118 -4,-1.7 -1,-0.3 1,-0.3 -2,-0.2 0.733 98.2 59.6 -66.0 -22.5 -3.0 -8.4 7.2 41 41 A L T << S+ 0 0 80 -3,-1.3 -1,-0.3 -4,-0.6 -2,-0.2 0.593 91.8 77.5 -81.3 -10.8 -6.0 -7.1 5.1 42 42 A M < - 0 0 5 -3,-1.3 2,-0.3 -4,-0.4 -1,-0.2 -0.770 61.1-179.5-109.1 89.7 -4.9 -9.1 2.0 43 43 A P S S- 0 0 93 0, 0.0 2,-2.1 0, 0.0 3,-0.1 -0.700 70.5 -10.3 -86.2 136.5 -5.8 -12.9 2.3 44 44 A G S S+ 0 0 36 -2,-0.3 -2,-0.1 1,-0.2 0, 0.0 -0.252 96.7 129.0 78.0 -52.8 -4.8 -15.2 -0.6 45 45 A A - 0 0 13 -2,-2.1 -1,-0.2 1,-0.1 2,-0.1 0.076 51.1-134.4 -42.6 140.7 -3.9 -12.3 -3.0 46 46 A S > - 0 0 18 -36,-0.1 4,-1.5 -3,-0.1 3,-0.3 -0.198 31.0 -87.6 -91.5-177.2 -0.4 -12.5 -4.7 47 47 A G H > S+ 0 0 23 1,-0.2 4,-2.5 2,-0.2 5,-0.2 0.793 121.4 64.8 -64.2 -30.3 2.4 -9.9 -5.1 48 48 A A H > S+ 0 0 68 2,-0.2 4,-1.8 1,-0.2 -1,-0.2 0.937 105.0 44.3 -57.9 -47.8 0.8 -8.6 -8.4 49 49 A E H > S+ 0 0 73 -3,-0.3 4,-2.1 1,-0.2 -1,-0.2 0.872 110.8 56.4 -62.7 -37.8 -2.2 -7.4 -6.5 50 50 A V H X S+ 0 0 0 -4,-1.5 4,-2.0 2,-0.2 -2,-0.2 0.895 104.6 51.0 -61.4 -42.0 0.1 -6.0 -3.8 51 51 A K H X S+ 0 0 97 -4,-2.5 4,-2.0 1,-0.2 -1,-0.2 0.904 108.0 54.2 -61.4 -40.7 1.9 -3.9 -6.5 52 52 A G H X S+ 0 0 23 -4,-1.8 4,-3.0 1,-0.2 5,-0.2 0.915 105.4 52.5 -57.4 -44.6 -1.5 -2.6 -7.6 53 53 A V H X S+ 0 0 0 -4,-2.1 4,-2.4 1,-0.2 -2,-0.2 0.910 107.0 52.8 -57.2 -44.3 -2.2 -1.5 -4.0 54 54 A C H X S+ 0 0 6 -4,-2.0 4,-1.2 2,-0.2 -1,-0.2 0.897 113.7 43.2 -59.3 -42.8 1.1 0.4 -4.0 55 55 A T H X S+ 0 0 67 -4,-2.0 4,-1.4 2,-0.2 3,-0.3 0.944 113.5 49.7 -67.2 -50.2 0.1 2.2 -7.2 56 56 A E H X S+ 0 0 45 -4,-3.0 4,-2.2 1,-0.2 -2,-0.2 0.837 103.6 61.8 -61.1 -34.1 -3.5 2.9 -6.1 57 57 A A H X S+ 0 0 0 -4,-2.4 4,-1.9 -5,-0.2 -1,-0.2 0.931 103.2 49.0 -57.0 -47.2 -2.2 4.3 -2.8 58 58 A G H X S+ 0 0 13 -4,-1.2 4,-2.6 -3,-0.3 -1,-0.2 0.853 107.7 55.6 -61.1 -34.8 -0.4 7.1 -4.6 59 59 A M H X S+ 0 0 95 -4,-1.4 4,-1.8 2,-0.2 -1,-0.2 0.917 107.0 49.1 -62.3 -44.1 -3.6 7.8 -6.6 60 60 A Y H X S+ 0 0 37 -4,-2.2 4,-0.9 1,-0.2 -2,-0.2 0.838 111.3 51.2 -64.1 -34.0 -5.5 8.3 -3.3 61 61 A A H ><>S+ 0 0 3 -4,-1.9 5,-2.9 -5,-0.2 3,-0.6 0.949 106.4 53.1 -65.9 -49.2 -2.7 10.6 -2.2 62 62 A L H ><5S+ 0 0 115 -4,-2.6 3,-1.7 1,-0.2 -2,-0.2 0.882 103.6 55.6 -57.3 -43.5 -2.8 12.7 -5.4 63 63 A R H 3<5S+ 0 0 138 -4,-1.8 -1,-0.2 1,-0.3 -2,-0.2 0.850 115.7 39.0 -60.6 -33.2 -6.6 13.4 -5.1 64 64 A E T <<5S- 0 0 93 -4,-0.9 -1,-0.3 -3,-0.6 -2,-0.2 0.239 114.5-119.9 -97.0 12.9 -6.0 14.8 -1.5 65 65 A R T < 5 + 0 0 213 -3,-1.7 2,-0.4 1,-0.2 -3,-0.2 0.713 52.2 171.1 55.9 23.8 -2.7 16.5 -2.8 66 66 A R < - 0 0 52 -5,-2.9 -1,-0.2 -6,-0.2 3,-0.1 -0.489 23.1-176.2 -67.9 118.8 -0.9 14.4 -0.2 67 67 A V S S+ 0 0 109 -2,-0.4 2,-0.6 1,-0.2 -39,-0.5 0.852 78.7 48.2 -81.2 -39.1 2.9 14.6 -0.6 68 68 A H E S-a 28 0A 102 -41,-0.1 -39,-0.2 -7,-0.1 -1,-0.2 -0.914 89.3-135.3-105.2 118.9 3.6 12.1 2.1 69 69 A V E -a 29 0A 5 -41,-2.5 -39,-2.2 -2,-0.6 2,-0.2 -0.415 20.7-162.4 -73.0 142.9 1.5 8.9 1.9 70 70 A T > - 0 0 28 -41,-0.2 4,-0.8 -13,-0.1 -37,-0.1 -0.441 37.8 -93.5-111.0-173.2 -0.2 7.4 5.0 71 71 A Q H > S+ 0 0 43 1,-0.2 4,-2.5 2,-0.2 5,-0.3 0.842 117.9 67.3 -70.1 -33.3 -1.7 4.0 5.9 72 72 A E H > S+ 0 0 105 1,-0.2 4,-2.7 2,-0.2 5,-0.3 0.898 96.4 53.0 -54.8 -46.0 -5.1 5.2 4.8 73 73 A D H > S+ 0 0 2 1,-0.2 4,-1.4 2,-0.2 -1,-0.2 0.898 111.6 46.3 -58.5 -42.3 -4.1 5.4 1.2 74 74 A F H X S+ 0 0 0 -4,-0.8 4,-2.7 -3,-0.2 -2,-0.2 0.939 114.1 45.0 -67.3 -49.6 -2.9 1.8 1.2 75 75 A E H X S+ 0 0 62 -4,-2.5 4,-2.3 1,-0.2 -2,-0.2 0.890 113.0 51.3 -65.8 -37.7 -5.9 0.3 3.0 76 76 A M H X S+ 0 0 97 -4,-2.7 4,-1.3 -5,-0.3 -1,-0.2 0.849 110.9 50.5 -62.5 -35.1 -8.3 2.3 0.7 77 77 A A H X S+ 0 0 0 -4,-1.4 4,-2.5 -5,-0.3 -2,-0.2 0.929 107.2 52.6 -66.5 -46.6 -6.2 0.8 -2.1 78 78 A V H X>S+ 0 0 8 -4,-2.7 4,-2.8 1,-0.2 5,-0.5 0.936 110.2 47.8 -54.0 -50.0 -6.6 -2.8 -0.7 79 79 A A H X5S+ 0 0 51 -4,-2.3 4,-1.1 1,-0.2 -1,-0.2 0.833 114.1 48.3 -60.5 -33.2 -10.4 -2.4 -0.6 80 80 A K H <5S+ 0 0 92 -4,-1.3 -1,-0.2 -5,-0.2 -2,-0.2 0.807 115.4 43.8 -77.1 -32.3 -10.3 -1.0 -4.2 81 81 A V H <5S+ 0 0 34 -4,-2.5 -2,-0.2 1,-0.1 -3,-0.2 0.949 122.5 33.7 -77.8 -53.0 -8.1 -3.9 -5.5 82 82 A M H <5S- 0 0 67 -4,-2.8 -3,-0.2 -5,-0.2 -2,-0.2 0.832 85.2-161.7 -76.1 -32.2 -9.8 -6.9 -3.8 83 83 A Q << + 0 0 142 -4,-1.1 3,-0.2 -5,-0.5 -3,-0.1 0.738 44.5 131.2 59.2 27.2 -13.3 -5.3 -4.0 84 84 A K + 0 0 156 1,-0.2 2,-1.8 -5,-0.1 -1,-0.1 0.972 56.3 62.4 -70.9 -56.5 -14.7 -7.6 -1.4 85 85 A D 0 0 109 -6,-0.1 -1,-0.2 1,-0.1 -2,-0.1 -0.524 360.0 360.0 -81.4 81.2 -16.4 -5.1 0.9 86 86 A S 0 0 181 -2,-1.8 -1,-0.1 -3,-0.2 0, 0.0 -0.292 360.0 360.0 55.7 360.0 -19.1 -3.5 -1.4